CuGenDBv2

Gene ID	Carg09905
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Mediator of RNA polymerase II transcription subunit 17
Genome location	Carg_Chr10:2606974..2613508
RNA-Seq Expression	Carg09905
Synteny	Carg09905
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0016592 - mediator complex (cellular component) GO:0070847 - core mediator complex (cellular component) GO:0003712 - transcription coregulator activity (molecular function)
InterPro domains	IPR019313 - Mediator complex, subunit Med17

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6589859.1 Mediator of RNA polymerase II transcription subunit 17, partial [Cucurbita argyrosperma subsp. sororia]

0.0e+00

98.49

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Query:  MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV
        DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV

Query:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESEEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREAF
        FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESEEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREAF
Subjt:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESEEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREAF

Query:  NPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSND
        NPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSND
Subjt:  NPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSND

Query:  KPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQF
        KPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPP IQARTSDSHQMKSVTKSQF
Subjt:  KPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQF

Query:  QTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPEDA
        QTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPEDA
Subjt:  QTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPEDA

Query:  QGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
        QGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDL +  S F + +
Subjt:  QGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL

KAG7023531.1 Mediator of RNA polymerase II transcription subunit 17 [Cucurbita argyrosperma subsp. argyrosperma]

0.0e+00

100

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Query:  MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV
        DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV

Query:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESEEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREAF
        FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESEEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREAF
Subjt:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESEEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREAF

Query:  NPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSND
        NPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSND
Subjt:  NPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSND

Query:  KPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQF
        KPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQF
Subjt:  KPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQF

Query:  QTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPEDA
        QTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPEDA
Subjt:  QTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPEDA

Query:  QGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
        QGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
Subjt:  QGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL

XP_022961046.1 mediator of RNA polymerase II transcription subunit 17-like [Cucurbita moschata]

0.0e+00

98.79

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Query:  MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVS+DKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV
        DAVTV GMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAA APANEGFTIDLFDNLSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV

Query:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESE-EFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKN STNSSNQSPIESE EFTND+EYIKETNSLLRQVHHAIFSEQVFDLVNREA
Subjt:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESE-EFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
        FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANT ILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN

Query:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ
        DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPF+QLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ
Subjt:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ

Query:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
        FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED

Query:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
        AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
Subjt:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL

XP_022987637.1 mediator of RNA polymerase II transcription subunit 17-like [Cucurbita maxima]

0.0e+00

98.04

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Query:  MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVS+DKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK SKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV
        DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV

Query:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESE-EFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRVDRDSSGMLAISLPPN+CHSL FGFLSGCNMENPLERGKNESTNSSNQSPIESE EFTNDDEYIKETNSLLRQVHHAIFSEQVFD VNREA
Subjt:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESE-EFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
        FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQS QTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN

Query:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ
        DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPF+QLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSH+M SVTKSQ
Subjt:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ

Query:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
        FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED

Query:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
        AQGCLSWWLVMDDGL EDRKHNF+ISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFG SL
Subjt:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL

XP_023516123.1 mediator of RNA polymerase II transcription subunit 17-like [Cucurbita pepo subsp. pepo]

0.0e+00

98.34

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Query:  MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVS+DKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK SKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV
        DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV

Query:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESE-EFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESE EFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA
Subjt:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESE-EFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
        FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQS QTVEDAN GILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVF++SN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN

Query:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ
        DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPF+QLISHPTWNSRKSSWTFFMEVPQSKLHPP IQARTSDSHQMKSVTKSQ
Subjt:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ

Query:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
        FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED

Query:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
        AQGCLSWWLVMDDGL EDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFG SL
Subjt:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXX2 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

91.09

Show/hide

Query:  MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MD DMKVS+DKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK+SKES+TPWQWQSMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV
        DAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDN SCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV

Query:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESE-EFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRVD DSSGMLAI+LPPNSCHSLRFGFLSGCN+ENPLER KNESTN SNQS +  E EFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVN+EA
Subjt:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESE-EFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
        FNPS+GINVTGIRENYLQLSIDQGTSVFISLVP+GQS QTVE AN+ IL+N +LPFDSLDGIELPDRSDPLEKKLRNPN+ TFEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN

Query:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ
        D+PISSLSRQSGQ SNDGSGLLGHFCLSLAHR+FAN VLMELENVVWKVPF+QLISHPTWNSRKSSWTFFMEVP S LHP SI+ARTSD +QM +VTK+Q
Subjt:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ

Query:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
        F TKVVVNDDCITIEGEGAP+VVGLF GNSKD+YS NRY CDLADLPVIILLQVASQIILWLHEEAL WGIK +RDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED

Query:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
         QGCLSWWLVMDDGL EDRK NF+ SDVVPEYRKFLGHLSLEVL STLMDLVSLCSG G SL
Subjt:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL

A0A1S4E2I2 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

90.03

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Query:  MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MD D+KVS+DKLP+KRLEAIEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKK+SKES+TPWQWQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV
        DAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDN SCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV

Query:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESE-EFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRVD DSSGMLAI+LPPNSCHSLRFGFLSGCN+ENPLE  KN++TN SNQ+ ++ E EFTNDDEYIKETNSLLRQVHHAIF EQVFDLVN EA
Subjt:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESE-EFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
        FNPS+GINVTGIRENYLQLSIDQGTSVFISLVP+GQS QTVE AN+ ILDN NLPFDSLDGIELPDRSDPLEKKLRNPN+ TFEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN

Query:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ
        D+PISSLSRQSGQ SNDGSGLLGHFCLSLAHR+FAN VLMELENVVWKVPF+QLISHPTWNSRKSSWTFFMEVP+S LHP SIQARTSDS+QM +VTK+Q
Subjt:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ

Query:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
        F TKVVVNDDCITIEGEGAP+VVGLF GNSKD+Y  NRY CDLADLPVIILLQVASQIILWLHEEALTWGIK +RDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED

Query:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
         QGCLSWWLVMDDGL EDRK NF+ SDVVPEYRKFLG+LSLEVL STLMDLVSLCSG G SL
Subjt:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL

A0A6J1CVE8 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

91.23

Show/hide

Query:  MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVS+DKLPVKRLEAIEENGLERFP DVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK+SKES+TPW WQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV
        DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDN SCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV

Query:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESEEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREAF
        FRPSSSTIRVD DSSGMLAI+LP NSCHS+RFGFLSGCN+ENPLERGKNESTNSSNQS I+ EEFTNDDEYIKETNSLLR+VHHAIFSEQVFDLVNREAF
Subjt:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESEEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREAF

Query:  NPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSND
        NPSLGINVTGIRENYLQLSIDQ TSVFISLVP+ +S Q V+ ANT ILDNTNLPFDSLDGIELPDRSD LEKKLRNPN+  FEIYLQQIFHELVFVKSND
Subjt:  NPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSND

Query:  KPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQF
        +PIS+LSRQ  QPSNDGSGLLGHFCLSLAHRIFAN VLMELENVVWKVP +QLISHPTWNSRKSSWTFFMEVP+S +HP  IQARTSD HQMK+VTKSQF
Subjt:  KPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQF

Query:  QTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPEDA
        QTKVVVNDDCITIEGEGAP+VVGL KGNSK++YSMNRYGCDLADLPVIILLQVA QIILWLH EALTWGIK +RDFLSLSFELEQGETLRLVAHVDPEDA
Subjt:  QTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPEDA

Query:  QGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
        QGCLSWWLVMDD L EDRK NFDISDVVPEYRKFLG+LSLEVL STLMDLVSLCSGFG  L
Subjt:  QGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL

A0A6J1H995 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

98.79

Show/hide

Query:  MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVS+DKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV
        DAVTV GMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAA APANEGFTIDLFDNLSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV

Query:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESE-EFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKN STNSSNQSPIESE EFTND+EYIKETNSLLRQVHHAIFSEQVFDLVNREA
Subjt:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESE-EFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
        FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANT ILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN

Query:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ
        DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPF+QLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ
Subjt:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ

Query:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
        FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED

Query:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
        AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
Subjt:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL

A0A6J1JAW7 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

98.04

Show/hide

Query:  MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVS+DKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK SKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV
        DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSV

Query:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESE-EFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA
        FRPSSSTIRVDRDSSGMLAISLPPN+CHSL FGFLSGCNMENPLERGKNESTNSSNQSPIESE EFTNDDEYIKETNSLLRQVHHAIFSEQVFD VNREA
Subjt:  FRPSSSTIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESE-EFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREA

Query:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
        FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQS QTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN
Subjt:  FNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSN

Query:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ
        DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPF+QLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSH+M SVTKSQ
Subjt:  DKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQ

Query:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
        FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED
Subjt:  FQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPED

Query:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL
        AQGCLSWWLVMDDGL EDRKHNF+ISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFG SL
Subjt:  AQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSSL

SwissProt top hits

e value

%identity

Alignment

F4K460 Mediator of RNA polymerase II transcription subunit 17

5.4e-212

58.27

Show/hide

Query:  MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVE
        MD DM++S+D+LP+KRLE+IEENG ERFPSDV Y++KR+SLIRRIDFAWA+E++D+  KKKQKK+SK+S   W+W+ M+ENLQLAHQEL+VIIDLI+TV+
Subjt:  MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVE

Query:  ANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPS
        ANDAVTVAGMTRPKP+PNE+LSDL VS ATKLQ +R+LG YFKQSAK LE+++ REARFYGALIRLQ+NWKVKRQR+ A   +NEGFTIDL D+   DP+
Subjt:  ANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPS

Query:  SVFRPSS-STIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESEEFT-NDDEYIKETNSLLRQVHHAIFSEQVFDLVN
        S FRPS+ STIRVD DS+GMLAI++P +S +SLRFG++    + N  E  ++  + + +  P  SE+ + +DD+Y+KET+SLLR+VH +IF+EQ+FD++N
Subjt:  SVFRPSS-STIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESEEFT-NDDEYIKETNSLLRQVHHAIFSEQVFDLVN

Query:  REAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFV
        REAFN  +G N++G+REN++++SI QG S+F+SL P+G++    +       ++  L  +S   +E  +  D   KKL  PN T++EIYLQQIFHE  F 
Subjt:  REAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFV

Query:  KSNDKPISSLSRQSGQPSND-GSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSV
        K+ D+  S   R S Q   D  SGLL HFCLSL HRIF+N+VL+ LE+VV KVP++ LISHPTWNSR SSWT FM VP S +     + ++ D    K  
Subjt:  KSNDKPISSLSRQSGQPSND-GSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSV

Query:  TKSQFQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHV
         K+QF+TKVVV DDCI++E E  P+VVGL K +S +++S+N+Y CD+ADLPV+IL QVASQI+ WL EEA T G K SR+FLSLS E+ +GE + LVAHV
Subjt:  TKSQFQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHV

Query:  DPEDAQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLC
        +PEDA+GC+SWWLVM++G TE+R       + V E RK LGHLSL+VL S LMDL++LC
Subjt:  DPEDAQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLC

Q5ZID1 Mediator of RNA polymerase II transcription subunit 17

2.0e-04

19.68

Show/hide

Query:  MKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDK--------------KKQKKASKESATPWQWQSMIENLQLAHQELSVI
        +++S++    K+++ +  +G E +   +   +    L +RIDF+     ++D+              + ++   K   + W W S+  NL+ A  E+ V+
Subjt:  MKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDK--------------KKQKKASKESATPWQWQSMIENLQLAHQELSVI

Query:  IDLINTVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVA------REARFYGALIRLQQNWKVKR
         D+++ V+    +T+  + +  P P +      + + +K +      +   + A+ L + VA      R+  F   L+RL+Q+WK+++
Subjt:  IDLINTVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVA------REARFYGALIRLQQNWKVKR

Arabidopsis top hits

e value

%identity

Alignment

AT5G20170.1 RNA polymerase II transcription mediators

3.8e-213

58.27

Show/hide

Query:  MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVE
        MD DM++S+D+LP+KRLE+IEENG ERFPSDV Y++KR+SLIRRIDFAWA+E++D+  KKKQKK+SK+S   W+W+ M+ENLQLAHQEL+VIIDLI+TV+
Subjt:  MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVE

Query:  ANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPS
        ANDAVTVAGMTRPKP+PNE+LSDL VS ATKLQ +R+LG YFKQSAK LE+++ REARFYGALIRLQ+NWKVKRQR+ A   +NEGFTIDL D+   DP+
Subjt:  ANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPS

Query:  SVFRPSS-STIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESEEFT-NDDEYIKETNSLLRQVHHAIFSEQVFDLVN
        S FRPS+ STIRVD DS+GMLAI++P +S +SLRFG++    + N  E  ++  + + +  P  SE+ + +DD+Y+KET+SLLR+VH +IF+EQ+FD++N
Subjt:  SVFRPSS-STIRVDRDSSGMLAISLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESEEFT-NDDEYIKETNSLLRQVHHAIFSEQVFDLVN

Query:  REAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFV
        REAFN  +G N++G+REN++++SI QG S+F+SL P+G++    +       ++  L  +S   +E  +  D   KKL  PN T++EIYLQQIFHE  F 
Subjt:  REAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFV

Query:  KSNDKPISSLSRQSGQPSND-GSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSV
        K+ D+  S   R S Q   D  SGLL HFCLSL HRIF+N+VL+ LE+VV KVP++ LISHPTWNSR SSWT FM VP S +     + ++ D    K  
Subjt:  KSNDKPISSLSRQSGQPSND-GSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSV

Query:  TKSQFQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHV
         K+QF+TKVVV DDCI++E E  P+VVGL K +S +++S+N+Y CD+ADLPV+IL QVASQI+ WL EEA T G K SR+FLSLS E+ +GE + LVAHV
Subjt:  TKSQFQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHV

Query:  DPEDAQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLC
        +PEDA+GC+SWWLVM++G TE+R       + V E RK LGHLSL+VL S LMDL++LC
Subjt:  DPEDAQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLC

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGACGGAGACATGAAAGTTTCTGTCGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATAGAAGAAAATGGTCTCGAACGATTTCCATCAGATGTTGGTTATGAAGAGAA
ACGATTGTCGCTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGGCCTCCAAGGAGAGTGCAACACCGTGGCAATGGC
AGAGCATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGATCTCATCAACACCGTGGAAGCTAATGATGCAGTAACAGTGGCTGGGATGACAAGG
CCAAAACCATTACCTAATGAAGTTTTATCAGATCTTGGAGTGTCTGTAGCAACGAAACTACAATGCTTTCGACATCTTGGTAAGTATTTCAAGCAGTCTGCTAAAGGTTT
GGAACGCCAGGTTGCCAGGGAAGCAAGATTTTATGGGGCTTTAATTCGATTGCAGCAAAATTGGAAGGTTAAAAGACAGCGCGTTGCTGCTCCAGCTCCTGCAAATGAAG
GCTTTACCATTGATTTATTTGACAATTTATCATGTGATCCTTCGTCTGTGTTTCGACCATCTTCATCTACTATTCGTGTTGATCGTGATTCGTCTGGAATGCTGGCAATT
AGTTTACCTCCAAATTCATGCCACTCCCTTCGTTTTGGATTTCTCAGTGGGTGTAATATGGAAAATCCTCTGGAACGTGGTAAAAATGAGTCCACAAATTCATCCAATCA
GTCTCCAATTGAAAGTGAGGAGTTTACAAATGACGATGAGTACATTAAGGAAACTAACTCACTTCTCCGTCAAGTTCACCATGCCATTTTCAGTGAGCAGGTGTTTGATT
TGGTGAATCGTGAAGCATTCAATCCATCCTTAGGTATCAACGTGACTGGCATACGAGAAAATTACTTGCAATTAAGTATAGATCAGGGTACGTCGGTTTTTATCTCTCTG
GTGCCAACTGGTCAAAGCGGCCAAACAGTTGAAGATGCAAATACCGGGATTCTGGATAATACAAATTTACCTTTTGATTCGCTTGATGGGATTGAACTACCAGATAGAAG
TGATCCGCTTGAAAAGAAATTGCGGAATCCTAATTATACAACCTTTGAGATATATCTGCAACAAATTTTCCATGAGCTAGTATTTGTAAAATCAAATGATAAACCCATTT
CATCATTAAGCAGGCAATCAGGTCAACCTTCTAATGATGGGTCTGGACTTCTTGGTCATTTCTGTTTGTCTCTGGCTCACAGAATATTCGCAAACAAGGTTCTTATGGAG
CTCGAAAATGTGGTTTGGAAAGTTCCATTTATTCAATTGATATCTCATCCCACTTGGAATTCTCGAAAATCTTCATGGACGTTTTTTATGGAAGTTCCCCAGTCCAAACT
TCATCCTCCTTCTATCCAGGCTCGTACATCAGATAGTCATCAAATGAAAAGTGTAACCAAATCACAATTTCAGACTAAAGTGGTTGTAAATGATGATTGCATCACCATTG
AAGGGGAAGGTGCTCCTGATGTAGTTGGCTTGTTCAAGGGAAATTCCAAGGATATGTATTCAATGAACAGATATGGCTGTGACTTGGCTGATCTTCCCGTTATAATCCTG
TTGCAGGTTGCGAGCCAAATTATTCTTTGGCTTCATGAGGAAGCCCTAACCTGGGGAATAAAGGTCAGCCGTGACTTCCTAAGTCTGTCATTTGAGCTAGAACAAGGTGA
AACACTCCGTCTGGTCGCCCATGTGGACCCAGAAGATGCTCAGGGATGCCTTTCTTGGTGGTTGGTAATGGACGATGGCCTAACGGAGGACAGGAAACATAACTTCGACA
TCTCAGATGTTGTGCCTGAATACAGGAAGTTTTTGGGCCATTTATCTCTGGAAGTTTTGCAATCTACACTAATGGATTTGGTTAGTTTGTGCAGTGGATTTGGTAGCAGC
CTATAA

mRNA sequence

Show/hide mRNA sequence

GTGTGAATATGGACGGAGACATGAAAGTTTCTGTCGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATAGAAGAAAATGGTCTCGAACGATTTCCATCAGATGTTGGTTAT
GAAGAGAAACGATTGTCGCTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGGCCTCCAAGGAGAGTGCAACACCGTG
GCAATGGCAGAGCATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGATCTCATCAACACCGTGGAAGCTAATGATGCAGTAACAGTGGCTGGGA
TGACAAGGCCAAAACCATTACCTAATGAAGTTTTATCAGATCTTGGAGTGTCTGTAGCAACGAAACTACAATGCTTTCGACATCTTGGTAAGTATTTCAAGCAGTCTGCT
AAAGGTTTGGAACGCCAGGTTGCCAGGGAAGCAAGATTTTATGGGGCTTTAATTCGATTGCAGCAAAATTGGAAGGTTAAAAGACAGCGCGTTGCTGCTCCAGCTCCTGC
AAATGAAGGCTTTACCATTGATTTATTTGACAATTTATCATGTGATCCTTCGTCTGTGTTTCGACCATCTTCATCTACTATTCGTGTTGATCGTGATTCGTCTGGAATGC
TGGCAATTAGTTTACCTCCAAATTCATGCCACTCCCTTCGTTTTGGATTTCTCAGTGGGTGTAATATGGAAAATCCTCTGGAACGTGGTAAAAATGAGTCCACAAATTCA
TCCAATCAGTCTCCAATTGAAAGTGAGGAGTTTACAAATGACGATGAGTACATTAAGGAAACTAACTCACTTCTCCGTCAAGTTCACCATGCCATTTTCAGTGAGCAGGT
GTTTGATTTGGTGAATCGTGAAGCATTCAATCCATCCTTAGGTATCAACGTGACTGGCATACGAGAAAATTACTTGCAATTAAGTATAGATCAGGGTACGTCGGTTTTTA
TCTCTCTGGTGCCAACTGGTCAAAGCGGCCAAACAGTTGAAGATGCAAATACCGGGATTCTGGATAATACAAATTTACCTTTTGATTCGCTTGATGGGATTGAACTACCA
GATAGAAGTGATCCGCTTGAAAAGAAATTGCGGAATCCTAATTATACAACCTTTGAGATATATCTGCAACAAATTTTCCATGAGCTAGTATTTGTAAAATCAAATGATAA
ACCCATTTCATCATTAAGCAGGCAATCAGGTCAACCTTCTAATGATGGGTCTGGACTTCTTGGTCATTTCTGTTTGTCTCTGGCTCACAGAATATTCGCAAACAAGGTTC
TTATGGAGCTCGAAAATGTGGTTTGGAAAGTTCCATTTATTCAATTGATATCTCATCCCACTTGGAATTCTCGAAAATCTTCATGGACGTTTTTTATGGAAGTTCCCCAG
TCCAAACTTCATCCTCCTTCTATCCAGGCTCGTACATCAGATAGTCATCAAATGAAAAGTGTAACCAAATCACAATTTCAGACTAAAGTGGTTGTAAATGATGATTGCAT
CACCATTGAAGGGGAAGGTGCTCCTGATGTAGTTGGCTTGTTCAAGGGAAATTCCAAGGATATGTATTCAATGAACAGATATGGCTGTGACTTGGCTGATCTTCCCGTTA
TAATCCTGTTGCAGGTTGCGAGCCAAATTATTCTTTGGCTTCATGAGGAAGCCCTAACCTGGGGAATAAAGGTCAGCCGTGACTTCCTAAGTCTGTCATTTGAGCTAGAA
CAAGGTGAAACACTCCGTCTGGTCGCCCATGTGGACCCAGAAGATGCTCAGGGATGCCTTTCTTGGTGGTTGGTAATGGACGATGGCCTAACGGAGGACAGGAAACATAA
CTTCGACATCTCAGATGTTGTGCCTGAATACAGGAAGTTTTTGGGCCATTTATCTCTGGAAGTTTTGCAATCTACACTAATGGATTTGGTTAGTTTGTGCAGTGGATTTG
GTAGCAGCCTATAACCATGAAATTGCATCGAGCTCTTGTAATTTCTGCCCATGTTTTCAAATCTCTAATGAAATCACCACTTTTTGTCCGC

Protein sequence

Show/hide protein sequence

MDGDMKVSVDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKASKESATPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTR
PKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSVFRPSSSTIRVDRDSSGMLAI
SLPPNSCHSLRFGFLSGCNMENPLERGKNESTNSSNQSPIESEEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISL
VPTGQSGQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHELVFVKSNDKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLME
LENVVWKVPFIQLISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHQMKSVTKSQFQTKVVVNDDCITIEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIIL
LQVASQIILWLHEEALTWGIKVSRDFLSLSFELEQGETLRLVAHVDPEDAQGCLSWWLVMDDGLTEDRKHNFDISDVVPEYRKFLGHLSLEVLQSTLMDLVSLCSGFGSS
L

Carg09905 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome