; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg09908 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09908
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRibosome biogenesis regulatory protein
Genome locationCarg_Chr10:2591168..2593584
RNA-Seq ExpressionCarg09908
SyntenyCarg09908
Gene Ontology termsGO:0000055 - ribosomal large subunit export from nucleus (biological process)
GO:0000447 - endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
InterPro domainsIPR007023 - Ribosomal biogenesis regulatory protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589856.1 Ribosome biogenesis regulatory protein-like protein, partial [Cucurbita argyrosperma subsp. sororia]6.8e-16895.27Show/hide
Query:  METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE
        METPQEVLVDIGHLMAFNPHHHFTSPPSSR       + +V     L KGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE
Subjt:  METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE

Query:  LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI
        LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI
Subjt:  LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI

Query:  TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR
        TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR
Subjt:  TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR

Query:  RKHDDRKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK
        RKHDDRKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK
Subjt:  RKHDDRKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK

KAG7023528.1 Ribosome biogenesis regulatory protein-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-180100Show/hide
Query:  METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE
        METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE
Subjt:  METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE

Query:  LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI
        LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI
Subjt:  LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI

Query:  TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR
        TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR
Subjt:  TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR

Query:  RKHDDRKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK
        RKHDDRKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK
Subjt:  RKHDDRKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK

XP_022961058.1 ribosome biogenesis regulatory protein homolog [Cucurbita moschata]1.4e-16594.08Show/hide
Query:  METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE
        METPQEV VDIGHLMAFNPHHHFTSPPSSR       + +V     L KGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE
Subjt:  METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE

Query:  LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI
        LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKR+ENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI
Subjt:  LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI

Query:  TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR
        TGTQA TKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR
Subjt:  TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR

Query:  RKHDDRKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK
        RKHDDRKPSSSTSSKLK NKKLQKKPLKKGSSKKGQAK
Subjt:  RKHDDRKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK

XP_022987784.1 ribosome biogenesis regulatory protein homolog [Cucurbita maxima]3.5e-16493.2Show/hide
Query:  METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE
        METPQEV VDIGHLMAF+PHHHFTSPP       P+ + +V     L KGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE
Subjt:  METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE

Query:  LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI
        LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKR+ENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI
Subjt:  LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI

Query:  TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR
        TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR
Subjt:  TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR

Query:  RKHDDRKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK
        RKHDDRKPSSSTSSKLK NKKLQKKPLKKGSSKKG+AK
Subjt:  RKHDDRKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK

XP_023515967.1 ribosome biogenesis regulatory protein homolog isoform X1 [Cucurbita pepo subsp. pepo]4.9e-16694.08Show/hide
Query:  METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE
        METPQEV VDIGHLMAFNPHHHFTSPPSSR       + +V     L KGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE
Subjt:  METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE

Query:  LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI
        LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKR+ENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI
Subjt:  LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI

Query:  TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR
        TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILN+NKAVNMYNVKREKR
Subjt:  TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR

Query:  RKHDDRKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK
        RKHDDRKPSSSTSSKLK NKKLQKKPLKKGSSKKGQAK
Subjt:  RKHDDRKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK

TrEMBL top hitse value%identityAlignment
A0A6J1CSP0 Ribosome biogenesis regulatory protein1.2e-14684.32Show/hide
Query:  METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE
        ME  Q++ VD+GHLMAFNPHHH TSPPSSR       + +V     L KGTELVQAIANELFILPSTEDRDGPLV+L  PKT+LPREK LPKPK PTKWE
Subjt:  METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE

Query:  LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI
        LFAKKRGIKNRKKDKI YDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPG+DPFA+R+ NKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI
Subjt:  LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI

Query:  TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR
        TGTQ   KK+TKDELGNVAGMAATATASGGKFD+KL GEKPPKH+GKYRKFLPVVEGTGVGSREREQTE VLNRLISKNSHEILN+NKA+NMYNVKREKR
Subjt:  TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR

Query:  RKHDDRKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK
        RKHD  KPSSSTSSKLK NKK QKK +KKG S KG+AK
Subjt:  RKHDDRKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK

A0A6J1F066 Ribosome biogenesis regulatory protein1.4e-13478.11Show/hide
Query:  METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE
        ME  Q   +D+G+LMAFNPHH + S  SSR       + +V     L KG EL Q IAN+LF LPSTEDRDGPLV+L  P T+LPREKPLPKPK PTKWE
Subjt:  METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE

Query:  LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI
        LFAKKRGIKNRKKDKI+YD+QT +WKRRHGYDRANDEENIPIIEAKMTDEPGVDPFA R+ NK+ RVEKQE N+LQNLKQAAKVGALPSHVQLAATALPI
Subjt:  LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI

Query:  TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR
        TGTQA  KKITKDELGNVAGMAAT+TASGGKFDKKL GEKP KH+GKYRKFLPVVEGTG+GS+EREQTEKVLNRLISKNSHEILNINKAVNMYNVK+EK+
Subjt:  TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR

Query:  RKHDDRKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK
        +++   K SS +S+KLK NKKLQKKPLKKGSSK G+AK
Subjt:  RKHDDRKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK

A0A6J1HAS5 Ribosome biogenesis regulatory protein6.9e-16694.08Show/hide
Query:  METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE
        METPQEV VDIGHLMAFNPHHHFTSPPSSR       + +V     L KGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE
Subjt:  METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE

Query:  LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI
        LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKR+ENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI
Subjt:  LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI

Query:  TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR
        TGTQA TKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR
Subjt:  TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR

Query:  RKHDDRKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK
        RKHDDRKPSSSTSSKLK NKKLQKKPLKKGSSKKGQAK
Subjt:  RKHDDRKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK

A0A6J1HW20 Ribosome biogenesis regulatory protein8.2e-13578.4Show/hide
Query:  METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE
        ME  Q   +D+G+LMAFNPHH F S  SSR       + +V     L KG EL Q IAN+LF LPSTEDRDGPLV+L  P T+LPREKPLPKPK PTKWE
Subjt:  METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE

Query:  LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI
        LFAKKRGIKNRKKDKI+YD+QT +WKRRHGYDRANDEENIPIIEAKMTDEPGVDPFA R+ NK+ RVEKQE N+LQNLKQAAKVGALPSHVQLAATALPI
Subjt:  LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI

Query:  TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR
        TGTQA  KKITKDELGNVAGMAAT+TASGGKFDKKL GEKP KH+GKYRKFLPVVEGTG+GS+EREQTEKVLNRLISKNSHEILNINKAVNMYNVK+EK+
Subjt:  TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR

Query:  RKHDDRKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK
        +++   K SS +S+KLK NKKLQKKPLKKGSSK G+AK
Subjt:  RKHDDRKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK

A0A6J1JJT9 Ribosome biogenesis regulatory protein1.7e-16493.2Show/hide
Query:  METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE
        METPQEV VDIGHLMAF+PHHHFTSPP       P+ + +V     L KGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE
Subjt:  METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE

Query:  LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI
        LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKR+ENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI
Subjt:  LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI

Query:  TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR
        TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR
Subjt:  TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR

Query:  RKHDDRKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK
        RKHDDRKPSSSTSSKLK NKKLQKKPLKKGSSKKG+AK
Subjt:  RKHDDRKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK

SwissProt top hitse value%identityAlignment
A1A5P2 Ribosome biogenesis regulatory protein homolog1.7e-2832.13Show/hide
Query:  EVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKK
        E+  D+G+L+A +      +PP+    + PS ++ ++         +  Q + N+L+ LP+    +  + +L +P T+LPREKPLP+P+  T+W+ FA+ 
Subjt:  EVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKK

Query:  RGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQA
        +GI+ +KK  +++DE +  W+RR GY RA D+    +IE   + +P  D FAKR   K++RV K E NRL+NL +A K+  +PS     +  L  TG Q 
Subjt:  RGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQA

Query:  TTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKRRKHDD
             +K+ELG    +A  +TAS G+F ++LP EK P+  GK RKF P+    G  + E++   ++L  + SK     L++ +A N     RE+ ++   
Subjt:  TTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKRRKHDD

Query:  RKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK
        ++   S   K K  ++      K G   +G+ +
Subjt:  RKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK

Q15050 Ribosome biogenesis regulatory protein homolog6.9e-3033.13Show/hide
Query:  EVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKK
        E+  D+G+L+A +      +PP+    + P+ ++ +Q         +  Q + N+L+ LP+    +  + +L +P T+LPREKPLP+P+  T+W+ FA+ 
Subjt:  EVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKK

Query:  RGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQA
        +GI+ +KK  +++DE +  W+RR GY RA D+    +IE     +P  D FAKR + K++RV K E NRL+NL +A K+  LPS     A  L  TG Q 
Subjt:  RGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQA

Query:  TTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKRRKHDD
             +K+ELG    +A  +TAS G+F ++LP EK P+  GK RKF P+    G  + E++   ++L  + SK     L++ +A N     RE+ ++   
Subjt:  TTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKRRKHDD

Query:  RKPSSSTSSKLKANK-----KLQKKPLKKGSSKKG
        ++   S   K K  +     K +  P  +G  +KG
Subjt:  RKPSSSTSSKLKANK-----KLQKKPLKKGSSKKG

Q2KIH4 Ribosome biogenesis regulatory protein homolog5.8e-2932.42Show/hide
Query:  EVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKK
        E+  D+G+L+A +      +PP+    + P+ ++ ++         +  Q + N+L+ LP+    +  + +L +P T+LPREKP+P+P+  T+W+ FA+ 
Subjt:  EVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKK

Query:  RGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQA
        +GI+ +KK  +++DE +  W+RR GY RA D+    +IE     +P  D FAKR + K++RV K E NRL+NL +A K+  LPS     A  +  TG Q 
Subjt:  RGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQA

Query:  TTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKRRKHDD
             +K+ELG    +A  +TAS G+F ++LP EK P+  GK RKF P+    G  + ER+   ++L  + SK     ++I +A N     RE+ ++   
Subjt:  TTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKRRKHDD

Query:  RKPSSSTSSKLKANKKLQKKPLKKGSSKKG
        ++   S   K K  ++      K G+  +G
Subjt:  RKPSSSTSSKLKANKKLQKKPLKKGSSKKG

Q9CYH6 Ribosome biogenesis regulatory protein homolog7.6e-2932.13Show/hide
Query:  EVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKK
        E+  D+G+L+A +      +PP+    + PS ++ ++         +  Q + N+L+ LP+    +  + +L +P T+LPREKPLP+P+  T+W+ FA+ 
Subjt:  EVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKK

Query:  RGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQA
        +GI+ +KK  +++DE +  W+RR GY RA D+    +IE   + +P  D FAKR + K++RV K E NRL+NL +A K+  +PS     +  L  TG Q 
Subjt:  RGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQA

Query:  TTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKRRKHDD
             +K+ELG    +A  +TAS G+F ++LP EK P+  GK RKF P+    G  + E++   ++L  + SK     L++ +A N     RE+ ++   
Subjt:  TTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKRRKHDD

Query:  RKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK
        ++   S   K K  ++      K G   +G+ +
Subjt:  RKPSSSTSSKLKANKKLQKKPLKKGSSKKGQAK

Q9SH88 Ribosome biogenesis regulatory protein homolog7.2e-10462.31Show/hide
Query:  METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE
        MET Q   VD+G+L+AFNP+H F S PSSR      G+ + +    L +GT+LVQ IAN+LF  PSTE  DGP+V+L  P TKLPREK +P+PK PTKWE
Subjt:  METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE

Query:  LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI
         FA K+GI+ RKK+K+++DEQT  +KRRHGYDR ND+ ++PIIEAK +DEPGVDPFAKR ++K+KRV KQE NRLQNLK A K GALPSHVQLAAT+LPI
Subjt:  LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI

Query:  TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR
        +GT+A  KKI KDELG+VAG+AAT+TASGGKFDKKLPGEKPPK +GK+ K+LPVV G G  + E+EQT  VL+++ SK+SHEILN+ KA+NMYNVK+EK+
Subjt:  TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR

Query:  RKHDDRKPSSSTSSKLKANKKLQKKPLKK
        +        S  S KLK  K + KKP  K
Subjt:  RKHDDRKPSSSTSSKLKANKKLQKKPLKK

Arabidopsis top hitse value%identityAlignment
AT2G37990.1 ribosome biogenesis regulatory protein (RRS1) family protein5.1e-10562.31Show/hide
Query:  METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE
        MET Q   VD+G+L+AFNP+H F S PSSR      G+ + +    L +GT+LVQ IAN+LF  PSTE  DGP+V+L  P TKLPREK +P+PK PTKWE
Subjt:  METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWE

Query:  LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI
         FA K+GI+ RKK+K+++DEQT  +KRRHGYDR ND+ ++PIIEAK +DEPGVDPFAKR ++K+KRV KQE NRLQNLK A K GALPSHVQLAAT+LPI
Subjt:  LFAKKRGIKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPI

Query:  TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR
        +GT+A  KKI KDELG+VAG+AAT+TASGGKFDKKLPGEKPPK +GK+ K+LPVV G G  + E+EQT  VL+++ SK+SHEILN+ KA+NMYNVK+EK+
Subjt:  TGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKR

Query:  RKHDDRKPSSSTSSKLKANKKLQKKPLKK
        +        S  S KLK  K + KKP  K
Subjt:  RKHDDRKPSSSTSSKLKANKKLQKKPLKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACGCCGCAGGAAGTTCTGGTCGACATTGGTCATCTAATGGCGTTCAATCCTCACCACCATTTCACTTCCCCGCCGTCCTCCAGGTTAGCTTCTTCTCCCTCCGG
CAAATCTATTGTGCAAACCACGTTTACACTACCTAAGGGTACAGAGCTAGTTCAAGCTATTGCTAATGAACTTTTCATCCTGCCTTCAACTGAAGATAGAGATGGTCCTC
TAGTGAAGTTGTCTCAACCTAAAACGAAATTGCCCAGGGAGAAGCCTCTTCCAAAGCCTAAGGCTCCTACAAAATGGGAACTTTTTGCTAAAAAACGAGGTATTAAAAAC
AGGAAAAAAGATAAGATTCTGTATGATGAACAAACTCAAACATGGAAGCGTCGCCATGGTTATGATCGTGCAAATGATGAGGAGAACATACCCATCATTGAGGCCAAGAT
GACAGATGAGCCGGGGGTCGATCCCTTTGCTAAGAGGAAAGAAAATAAGAGGAAACGAGTTGAAAAGCAAGAAAATAATCGCTTACAGAATCTGAAACAAGCTGCAAAAG
TTGGTGCTTTGCCAAGCCATGTTCAACTAGCTGCAACGGCTCTGCCCATAACCGGGACGCAAGCTACAACAAAGAAAATTACAAAAGACGAGCTTGGAAACGTGGCTGGA
ATGGCTGCAACCGCAACAGCTAGCGGTGGAAAATTCGACAAGAAGTTGCCTGGAGAAAAGCCTCCAAAGCATGAAGGAAAATATCGCAAGTTTTTACCCGTTGTGGAAGG
AACGGGCGTTGGGTCTCGAGAAAGGGAGCAAACTGAGAAAGTCCTGAACCGTCTAATATCAAAGAATTCACATGAGATACTAAACATCAATAAGGCTGTGAACATGTACA
ACGTGAAAAGAGAAAAGAGGCGCAAACATGATGATAGAAAGCCTTCATCATCAACATCGAGCAAGTTGAAAGCAAATAAGAAACTTCAGAAGAAGCCGCTGAAGAAGGGA
TCATCGAAGAAAGGACAGGCCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGACGCCGCAGGAAGTTCTGGTCGACATTGGTCATCTAATGGCGTTCAATCCTCACCACCATTTCACTTCCCCGCCGTCCTCCAGGTTAGCTTCTTCTCCCTCCGG
CAAATCTATTGTGCAAACCACGTTTACACTACCTAAGGGTACAGAGCTAGTTCAAGCTATTGCTAATGAACTTTTCATCCTGCCTTCAACTGAAGATAGAGATGGTCCTC
TAGTGAAGTTGTCTCAACCTAAAACGAAATTGCCCAGGGAGAAGCCTCTTCCAAAGCCTAAGGCTCCTACAAAATGGGAACTTTTTGCTAAAAAACGAGGTATTAAAAAC
AGGAAAAAAGATAAGATTCTGTATGATGAACAAACTCAAACATGGAAGCGTCGCCATGGTTATGATCGTGCAAATGATGAGGAGAACATACCCATCATTGAGGCCAAGAT
GACAGATGAGCCGGGGGTCGATCCCTTTGCTAAGAGGAAAGAAAATAAGAGGAAACGAGTTGAAAAGCAAGAAAATAATCGCTTACAGAATCTGAAACAAGCTGCAAAAG
TTGGTGCTTTGCCAAGCCATGTTCAACTAGCTGCAACGGCTCTGCCCATAACCGGGACGCAAGCTACAACAAAGAAAATTACAAAAGACGAGCTTGGAAACGTGGCTGGA
ATGGCTGCAACCGCAACAGCTAGCGGTGGAAAATTCGACAAGAAGTTGCCTGGAGAAAAGCCTCCAAAGCATGAAGGAAAATATCGCAAGTTTTTACCCGTTGTGGAAGG
AACGGGCGTTGGGTCTCGAGAAAGGGAGCAAACTGAGAAAGTCCTGAACCGTCTAATATCAAAGAATTCACATGAGATACTAAACATCAATAAGGCTGTGAACATGTACA
ACGTGAAAAGAGAAAAGAGGCGCAAACATGATGATAGAAAGCCTTCATCATCAACATCGAGCAAGTTGAAAGCAAATAAGAAACTTCAGAAGAAGCCGCTGAAGAAGGGA
TCATCGAAGAAAGGACAGGCCAAATGAGGTTATTACCCTTTATAATGGTTAGTATTTTAACTAAGAGTTCTTGTACTACACAATCTTCTTTATGGAAGGAATTTTGCATT
TGGACTGTTTATTGTAGTAATTATCTTCTCCATTCAAGGAATAGTGCCTCCCTTTCTCACACACTATCAGAAGACGAATATGTAGTTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
METPQEVLVDIGHLMAFNPHHHFTSPPSSRLASSPSGKSIVQTTFTLPKGTELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRGIKN
RKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQATTKKITKDELGNVAG
MAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKRRKHDDRKPSSSTSSKLKANKKLQKKPLKKG
SSKKGQAK