; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg09951 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg09951
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRING-type domain-containing protein
Genome locationCarg_Chr10:2372332..2373469
RNA-Seq ExpressionCarg09951
SyntenyCarg09951
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR027370 - RING-type zinc-finger, LisH dimerisation motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589815.1 hypothetical protein SDJN03_15238, partial [Cucurbita argyrosperma subsp. sororia]1.2e-10098.38Show/hide
Query:  YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL
        +++GIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL
Subjt:  YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL

Query:  GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDSTEQE
        GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDSTEQE
Subjt:  GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDSTEQE

KAG7023486.1 hypothetical protein SDJN02_14511, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-104100Show/hide
Query:  MFGTYVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIR
        MFGTYVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIR
Subjt:  MFGTYVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIR

Query:  YNSLGKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDSTEQE
        YNSLGKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDSTEQE
Subjt:  YNSLGKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDSTEQE

XP_022961019.1 uncharacterized protein LOC111461650 isoform X1 [Cucurbita moschata]5.4e-9896.24Show/hide
Query:  YVAGIVPFSNQMDVRSEE-DRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNS
        +++GIVPFSNQMDVRSEE DRSLARPIFMKRSRHQYSHQYCRRGSTS+ANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNS
Subjt:  YVAGIVPFSNQMDVRSEE-DRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNS

Query:  LGKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDSTEQE
        LGKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELP+AAVLVCGHVYHADCLENGSNVEDRSDP CPLCMEPPAKVDDSTEQE
Subjt:  LGKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDSTEQE

XP_022961020.1 uncharacterized protein LOC111461650 isoform X2 [Cucurbita moschata]2.2e-9996.76Show/hide
Query:  YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL
        +++GIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTS+ANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL
Subjt:  YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL

Query:  GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDSTEQE
        GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELP+AAVLVCGHVYHADCLENGSNVEDRSDP CPLCMEPPAKVDDSTEQE
Subjt:  GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDSTEQE

XP_023516462.1 uncharacterized protein LOC111780320 isoform X2 [Cucurbita pepo subsp. pepo]8.4e-9996.76Show/hide
Query:  YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL
        +++GIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFP HIESNESTFLRPERIRYNSL
Subjt:  YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL

Query:  GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDSTEQE
        GKDTI SHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSN+EDRSDPRCPLCMEPPAKVDDSTEQE
Subjt:  GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDSTEQE

TrEMBL top hitse value%identityAlignment
A0A6J1BZ68 uncharacterized protein LOC1110068262.2e-8484.53Show/hide
Query:  YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL
        +++G+VPFSNQMDV SEED+SLARP+FMKRSRHQYSHQYCRRGSTSQANASTSRENRVRT+LE+RPAFKFAAHCNSEFP+HIES E+TF  PERIRY+SL
Subjt:  YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL

Query:  GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDS
        GKD ISSHG +++CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLE  S VEDRSDP CPLC EP  K+DDS
Subjt:  GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDS

A0A6J1HAS2 uncharacterized protein LOC111461650 isoform X21.1e-9996.76Show/hide
Query:  YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL
        +++GIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTS+ANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL
Subjt:  YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL

Query:  GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDSTEQE
        GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELP+AAVLVCGHVYHADCLENGSNVEDRSDP CPLCMEPPAKVDDSTEQE
Subjt:  GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDSTEQE

A0A6J1HCS6 uncharacterized protein LOC111461650 isoform X12.6e-9896.24Show/hide
Query:  YVAGIVPFSNQMDVRSEE-DRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNS
        +++GIVPFSNQMDVRSEE DRSLARPIFMKRSRHQYSHQYCRRGSTS+ANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNS
Subjt:  YVAGIVPFSNQMDVRSEE-DRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNS

Query:  LGKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDSTEQE
        LGKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELP+AAVLVCGHVYHADCLENGSNVEDRSDP CPLCMEPPAKVDDSTEQE
Subjt:  LGKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDSTEQE

A0A6J1JBJ7 uncharacterized protein LOC111485281 isoform X19.3e-9694.62Show/hide
Query:  YVAGIVPFSNQMDVRSEE-DRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNS
        +++GIVPFSNQMDVRSEE DRSLARPIFMKRSRHQYSHQYCRRGSTSQ NASTSRENRVRTILEKRP FKFAAHCNSEFPDHIESNE TFLRPERIRYNS
Subjt:  YVAGIVPFSNQMDVRSEE-DRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNS

Query:  LGKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDSTEQE
         GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDS  QE
Subjt:  LGKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDSTEQE

A0A6J1JKN5 uncharacterized protein LOC111485281 isoform X23.8e-9795.14Show/hide
Query:  YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL
        +++GIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQ NASTSRENRVRTILEKRP FKFAAHCNSEFPDHIESNE TFLRPERIRYNS 
Subjt:  YVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSL

Query:  GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDSTEQE
        GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDS  QE
Subjt:  GKDTISSHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDSTEQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19680.1 RING/U-box superfamily protein1.2e-1045Show/hide
Query:  CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCME
        CG C KL+  +     + ++  +LP+ AVL CGHVYHA CLE  +N  ++ DP CP+C E
Subjt:  CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCME

AT1G75400.1 RING/U-box superfamily protein8.3e-1247.46Show/hide
Query:  VCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLC
        VCG C KL+  +     +++++ ELP+AAVL CGHVYHA+CLE  +   ++ DP CP+C
Subjt:  VCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLC

AT4G39140.1 RING/U-box superfamily protein7.7e-1025.86Show/hide
Query:  PFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTI--LEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDT
        P S+Q  +      +L      + S+     Q   + S S+++A+  R+         +  P+  ++    SE      SN++            L +D 
Subjt:  PFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTI--LEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDT

Query:  ISSHGRKI------VCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLC
        I  HG ++       CG C + L  + L        ++EL V+A+L CGHVYH +CLE  +   D+ DP CP+C
Subjt:  ISSHGRKI------VCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLC

AT4G39140.2 RING/U-box superfamily protein7.7e-1025.86Show/hide
Query:  PFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTI--LEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDT
        P S+Q  +      +L      + S+     Q   + S S+++A+  R+         +  P+  ++    SE      SN++            L +D 
Subjt:  PFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTI--LEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDT

Query:  ISSHGRKI------VCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLC
        I  HG ++       CG C + L  + L        ++EL V+A+L CGHVYH +CLE  +   D+ DP CP+C
Subjt:  ISSHGRKI------VCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLC

AT4G39140.3 RING/U-box superfamily protein7.7e-1025.86Show/hide
Query:  PFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTI--LEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDT
        P S+Q  +      +L      + S+     Q   + S S+++A+  R+         +  P+  ++    SE      SN++            L +D 
Subjt:  PFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTI--LEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDT

Query:  ISSHGRKI------VCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLC
        I  HG ++       CG C + L  + L        ++EL V+A+L CGHVYH +CLE  +   D+ DP CP+C
Subjt:  ISSHGRKI------VCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGGTACGTATGTTGCAGGTATAGTGCCATTTTCCAATCAAATGGATGTGCGGTCAGAAGAGGATCGGAGTCTCGCCCGTCCAATATTCATGAAACGTTCACGTCA
TCAGTATAGTCATCAATATTGTCGACGAGGTTCAACCAGTCAAGCAAATGCATCCACCTCCCGCGAAAACCGAGTTCGAACCATACTCGAAAAACGTCCCGCTTTTAAAT
TTGCAGCTCACTGCAACTCAGAGTTTCCAGATCATATAGAGAGCAATGAGAGCACCTTCTTGAGGCCAGAAAGGATAAGGTACAATTCCTTAGGGAAGGATACAATTTCA
TCTCATGGAAGGAAAATAGTATGTGGGATTTGTCAAAAGCTGATGAGACGAAAGCTTTGCTTCCTCGGTAACACGTTGTCTTCCAGCGAACTTCCCGTTGCTGCGGTTTT
GGTATGTGGCCATGTCTATCATGCAGACTGTCTGGAGAACGGGTCAAACGTCGAAGATAGAAGCGATCCCCGTTGTCCATTGTGCATGGAACCGCCTGCAAAAGTCGACG
ATTCAACCGAGCAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGGTACGTATGTTGCAGGTATAGTGCCATTTTCCAATCAAATGGATGTGCGGTCAGAAGAGGATCGGAGTCTCGCCCGTCCAATATTCATGAAACGTTCACGTCA
TCAGTATAGTCATCAATATTGTCGACGAGGTTCAACCAGTCAAGCAAATGCATCCACCTCCCGCGAAAACCGAGTTCGAACCATACTCGAAAAACGTCCCGCTTTTAAAT
TTGCAGCTCACTGCAACTCAGAGTTTCCAGATCATATAGAGAGCAATGAGAGCACCTTCTTGAGGCCAGAAAGGATAAGGTACAATTCCTTAGGGAAGGATACAATTTCA
TCTCATGGAAGGAAAATAGTATGTGGGATTTGTCAAAAGCTGATGAGACGAAAGCTTTGCTTCCTCGGTAACACGTTGTCTTCCAGCGAACTTCCCGTTGCTGCGGTTTT
GGTATGTGGCCATGTCTATCATGCAGACTGTCTGGAGAACGGGTCAAACGTCGAAGATAGAAGCGATCCCCGTTGTCCATTGTGCATGGAACCGCCTGCAAAAGTCGACG
ATTCAACCGAGCAGGAATGA
Protein sequenceShow/hide protein sequence
MFGTYVAGIVPFSNQMDVRSEEDRSLARPIFMKRSRHQYSHQYCRRGSTSQANASTSRENRVRTILEKRPAFKFAAHCNSEFPDHIESNESTFLRPERIRYNSLGKDTIS
SHGRKIVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENGSNVEDRSDPRCPLCMEPPAKVDDSTEQE