; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg10002 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10002
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr10:2126864..2127287
RNA-Seq ExpressionCarg10002
SyntenyCarg10002
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589767.1 hypothetical protein SDJN03_15190, partial [Cucurbita argyrosperma subsp. sororia]8.4e-5498.2Show/hide
Query:  MRKGPFLFLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS
        MRKGPF FLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKST SLLWDVS
Subjt:  MRKGPFLFLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS

Query:  CGFFSLCVLLT
        CGFFSLCVLLT
Subjt:  CGFFSLCVLLT

KAG7023439.1 hypothetical protein SDJN02_14464, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-57100Show/hide
Query:  MRKGPFLFLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS
        MRKGPFLFLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS
Subjt:  MRKGPFLFLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS

Query:  CGFFSLCVLLTGL
        CGFFSLCVLLTGL
Subjt:  CGFFSLCVLLTGL

XP_022921746.1 uncharacterized protein LOC111429900 [Cucurbita moschata]2.3e-5698.23Show/hide
Query:  MRKGPFLFLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS
        MRKGPFL LLISLLCLCLLPFCLSEA+FTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS
Subjt:  MRKGPFLFLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS

Query:  CGFFSLCVLLTGL
        CGFFSLCVLLTGL
Subjt:  CGFFSLCVLLTGL

XP_022988599.1 uncharacterized protein LOC111485797 [Cucurbita maxima]9.9e-5595.58Show/hide
Query:  MRKGPFLFLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS
        MRKGPFL LLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQ S+QINVGAAT+VMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLW+VS
Subjt:  MRKGPFLFLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS

Query:  CGFFSLCVLLTGL
        CGFFSLCVLLTGL
Subjt:  CGFFSLCVLLTGL

XP_023516536.1 uncharacterized protein LOC111780387 [Cucurbita pepo subsp. pepo]1.5e-5597.35Show/hide
Query:  MRKGPFLFLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS
        MRKGPFL LLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQDSKQI VGAAT VMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS
Subjt:  MRKGPFLFLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS

Query:  CGFFSLCVLLTGL
        CGFFSLCVLLTGL
Subjt:  CGFFSLCVLLTGL

TrEMBL top hitse value%identityAlignment
A0A0A0LW17 Uncharacterized protein5.5e-2760.18Show/hide
Query:  MRKGPFLFLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAA-TKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDV
        M+KG  L  L S++ L LLPFCL E  FT KA D  K LKQGRPRKD+Q S++++ GA+   VMRA+ VYGG NDIH GHSKNDAN L IKS SSL+W V
Subjt:  MRKGPFLFLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAA-TKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDV

Query:  SCGFFSLCVLLTG
        S GF   CV++ G
Subjt:  SCGFFSLCVLLTG

A0A5A7SWW6 Uncharacterized protein3.6e-2660.53Show/hide
Query:  MRKGPFLFLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRK---DLQDSKQINVGAA-TKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLL
        M+KG  +  L S+LCL LLPFCL E  FT KA D  K LKQGRPRK   DLQ S++++ GAA   VMRA+ VYGG NDIH G SKNDAN LRIKS SSL+
Subjt:  MRKGPFLFLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRK---DLQDSKQINVGAA-TKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLL

Query:  WDVSCGFFSLCVLL
        W VS GF   C+++
Subjt:  WDVSCGFFSLCVLL

A0A6J1C4Y5 uncharacterized protein LOC1110074321.2e-1352.14Show/hide
Query:  GPFLFLLISLLCLCLLPFCLS-EAYFTNKAYDPYK-HLKQGRPRKDLQ----DSKQINVGA-ATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLL
        G  + LLIS+     LP C S E  FT K  D YK  LKQGRP KDL+    +S++   GA A K+MRARGVYGG +D+ RGHSKNDA  LRIKS  S  
Subjt:  GPFLFLLISLLCLCLLPFCLS-EAYFTNKAYDPYK-HLKQGRPRKDLQ----DSKQINVGA-ATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLL

Query:  WDVSCGFFSLCVLLTGL
        W+V C    + V  TGL
Subjt:  WDVSCGFFSLCVLLTGL

A0A6J1E284 uncharacterized protein LOC1114299001.1e-5698.23Show/hide
Query:  MRKGPFLFLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS
        MRKGPFL LLISLLCLCLLPFCLSEA+FTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS
Subjt:  MRKGPFLFLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS

Query:  CGFFSLCVLLTGL
        CGFFSLCVLLTGL
Subjt:  CGFFSLCVLLTGL

A0A6J1JM10 uncharacterized protein LOC1114857974.8e-5595.58Show/hide
Query:  MRKGPFLFLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS
        MRKGPFL LLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQ S+QINVGAAT+VMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLW+VS
Subjt:  MRKGPFLFLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVS

Query:  CGFFSLCVLLTGL
        CGFFSLCVLLTGL
Subjt:  CGFFSLCVLLTGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAAGGACCATTCCTTTTCCTCCTCATCTCCCTTCTTTGCCTCTGTCTCCTTCCATTTTGTCTATCTGAAGCCTATTTCACCAACAAAGCTTATGATCCTTACAA
GCACCTGAAGCAGGGGAGGCCCAGAAAAGATTTGCAGGACAGTAAGCAGATAAACGTTGGAGCTGCAACGAAGGTTATGAGAGCAAGAGGAGTTTATGGCGGGGGGAACG
ACATTCATAGGGGGCACTCGAAGAATGATGCTAACCCTTTACGGATCAAATCAACTTCTTCGTTGCTGTGGGATGTTTCATGTGGCTTCTTTAGTTTATGTGTTCTTCTT
ACAGGTCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAAAGGACCATTCCTTTTCCTCCTCATCTCCCTTCTTTGCCTCTGTCTCCTTCCATTTTGTCTATCTGAAGCCTATTTCACCAACAAAGCTTATGATCCTTACAA
GCACCTGAAGCAGGGGAGGCCCAGAAAAGATTTGCAGGACAGTAAGCAGATAAACGTTGGAGCTGCAACGAAGGTTATGAGAGCAAGAGGAGTTTATGGCGGGGGGAACG
ACATTCATAGGGGGCACTCGAAGAATGATGCTAACCCTTTACGGATCAAATCAACTTCTTCGTTGCTGTGGGATGTTTCATGTGGCTTCTTTAGTTTATGTGTTCTTCTT
ACAGGTCTGTAA
Protein sequenceShow/hide protein sequence
MRKGPFLFLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRKDLQDSKQINVGAATKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVSCGFFSLCVLL
TGL