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Carg10004 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10004
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr10:2124793..2125137
RNA-Seq ExpressionCarg10004
SyntenyCarg10004
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587814.1 hypothetical protein SDJN03_16379, partial [Cucurbita argyrosperma subsp. sororia]1.6e-0452.38Show/hide
Query:  IFPVP-IALISLS---PCCLAYHGDDSSSFTGVLRRNILHPSEHRWADKHTGSSSAMKISIKR
        +FP+  I L+ LS   P   A +  D  S TG+L RN+LHP EH+  DK TGSS A KISIKR
Subjt:  IFPVP-IALISLS---PCCLAYHGDDSSSFTGVLRRNILHPSEHRWADKHTGSSSAMKISIKR

KAG6589765.1 hypothetical protein SDJN03_15188, partial [Cucurbita argyrosperma subsp. sororia]2.1e-57100Show/hide
Query:  MNSTKLITRTKKILIFRENVSERKIPCSLNLCDYTLYLDSRILGSSDSIFPVPIALISLSPCCLAYHGDDSSSFTGVLRRNILHPSEHRWADKHTGSSSA
        MNSTKLITRTKKILIFRENVSERKIPCSLNLCDYTLYLDSRILGSSDSIFPVPIALISLSPCCLAYHGDDSSSFTGVLRRNILHPSEHRWADKHTGSSSA
Subjt:  MNSTKLITRTKKILIFRENVSERKIPCSLNLCDYTLYLDSRILGSSDSIFPVPIALISLSPCCLAYHGDDSSSFTGVLRRNILHPSEHRWADKHTGSSSA

Query:  MKISIKRRFTDGSQ
        MKISIKRRFTDGSQ
Subjt:  MKISIKRRFTDGSQ

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCAACGAAGCTTATTACAAGAACCAAGAAAATCTTGATTTTCCGGGAAAATGTTTCTGAAAGGAAAATTCCCTGTAGTCTGAATCTATGCGATTACACATTATA
CCTCGATTCTCGGATTCTCGGATCCTCGGATTCGATTTTCCCTGTTCCAATAGCCCTAATTTCTCTCTCACCATGTTGTCTGGCTTATCATGGCGATGATTCGAGTTCTT
TCACCGGAGTACTCCGCCGGAATATCCTTCATCCATCGGAGCATCGGTGGGCGGATAAACACACCGGATCCTCTTCGGCCATGAAGATCAGTATCAAAAGAAGGTTTACA
GATGGTTCCCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACTCAACGAAGCTTATTACAAGAACCAAGAAAATCTTGATTTTCCGGGAAAATGTTTCTGAAAGGAAAATTCCCTGTAGTCTGAATCTATGCGATTACACATTATA
CCTCGATTCTCGGATTCTCGGATCCTCGGATTCGATTTTCCCTGTTCCAATAGCCCTAATTTCTCTCTCACCATGTTGTCTGGCTTATCATGGCGATGATTCGAGTTCTT
TCACCGGAGTACTCCGCCGGAATATCCTTCATCCATCGGAGCATCGGTGGGCGGATAAACACACCGGATCCTCTTCGGCCATGAAGATCAGTATCAAAAGAAGGTTTACA
GATGGTTCCCAGTAG
Protein sequenceShow/hide protein sequence
MNSTKLITRTKKILIFRENVSERKIPCSLNLCDYTLYLDSRILGSSDSIFPVPIALISLSPCCLAYHGDDSSSFTGVLRRNILHPSEHRWADKHTGSSSAMKISIKRRFT
DGSQ