; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg10014 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10014
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description50S ribosomal protein L35
Genome locationCarg_Chr10:2064679..2066930
RNA-Seq ExpressionCarg10014
SyntenyCarg10014
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001706 - Ribosomal protein L35, non-mitochondrial
IPR018265 - Ribosomal protein L35, conserved site
IPR021137 - Ribosomal protein L35
IPR037229 - Ribosomal protein L35 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589755.1 50S ribosomal protein L35, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.1e-7299.34Show/hide
Query:  MASASATASFGLRFSPLCSRSSVRVSRSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGK
        MASASATASFGL FSPLCSRSSVRVSRSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASATASFGLRFSPLCSRSSVRVSRSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
Subjt:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

KAG7023426.1 50S ribosomal protein L35, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]8.2e-73100Show/hide
Query:  MASASATASFGLRFSPLCSRSSVRVSRSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGK
        MASASATASFGLRFSPLCSRSSVRVSRSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASATASFGLRFSPLCSRSSVRVSRSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
Subjt:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

XP_022922051.1 50S ribosomal protein L35, chloroplastic-like [Cucurbita moschata]2.6e-7198.68Show/hide
Query:  MASASATASFGLRFSPLCSRSSVRVSRSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGK
        MASASATASFGLRF PLCSRSSV VSRSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASATASFGLRFSPLCSRSSVRVSRSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
Subjt:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

XP_022988597.1 50S ribosomal protein L35, chloroplastic-like [Cucurbita maxima]2.2e-7096.69Show/hide
Query:  MASASATASFGLRFSPLCSRSSVRVSRSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGK
        MASASA+ SFGLRFSPLCSRSSVRVSR SVRLPSSNKAYSLRLSSSHN+S FGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASATASFGLRFSPLCSRSSVRVSRSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
Subjt:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

XP_023516182.1 50S ribosomal protein L35, chloroplastic-like [Cucurbita pepo subsp. pepo]1.0e-7098.01Show/hide
Query:  MASASATASFGLRFSPLCSRSSVRVSRSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGK
        MASASATASFGLRFSPLCSRSSVRVSRSSVRLPSSNKAYSLRLSSSHNISRFGVAL+QKP HIAPSSRI TPFTVVAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASATASFGLRFSPLCSRSSVRVSRSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
Subjt:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

TrEMBL top hitse value%identityAlignment
A0A1S3B9R8 50S ribosomal protein L352.1e-5882.78Show/hide
Query:  MASASATASFGLRFSPLCSRSSVRVSRSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGK
        MASAS   SFGLRFSPLCSR S RVS +SV L S NK  SL+LSSSHNIS FG+  LQKP HI+P+S+IHTPFTV AAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASATASFGLRFSPLCSRSSVRVSRSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLLYKKN KR+LRLSK+HPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

A0A6J1C550 50S ribosomal protein L359.2e-6288.82Show/hide
Query:  MASASATASFGLRFSPLCSRSSVRVSRSSVRLPSS-NKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRG
        MASAS T SFGLRFSPLCSR SVRVS  SVRL SS NK  SLRL SS NIS FGVALLQK FHIAP+S++HTP TVVAAKGYKMKTHKASAKRFRVTGRG
Subjt:  MASASATASFGLRFSPLCSRSSVRVSRSSVRLPSS-NKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRG

Query:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
Subjt:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

A0A6J1E327 50S ribosomal protein L351.3e-7198.68Show/hide
Query:  MASASATASFGLRFSPLCSRSSVRVSRSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGK
        MASASATASFGLRF PLCSRSSV VSRSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASATASFGLRFSPLCSRSSVRVSRSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
Subjt:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

A0A6J1EZN8 50S ribosomal protein L352.3e-5784.11Show/hide
Query:  MASASATASFGLRFSPLCSRSSVRVSRSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGK
        MASAS  A FGLRF+PLCSR S  VS SS+RL S NKA SLRLSSSHNIS  GVALLQK   IAP  ++ TP TVVAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASATASFGLRFSPLCSRSSVRVSRSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

A0A6J1JDG6 50S ribosomal protein L351.1e-7096.69Show/hide
Query:  MASASATASFGLRFSPLCSRSSVRVSRSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGK
        MASASA+ SFGLRFSPLCSRSSVRVSR SVRLPSSNKAYSLRLSSSHN+S FGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASATASFGLRFSPLCSRSSVRVSRSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
Subjt:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

SwissProt top hitse value%identityAlignment
B2J0D1 50S ribosomal protein L355.1e-0957.14Show/hide
Query:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL
        K+KT KA+AKRFR TG GKIVRR+AGK HLL  K++ +K  +SK   V   D  NV   LPYL
Subjt:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL

P23326 50S ribosomal protein L35, chloroplastic4.7e-3160.51Show/hide
Query:  MASASATASF---GLRFSPLCSRSSVRVSRSSVRLPSSNKAYSLRLSSSHNISRFGV---ALLQKPFHIAPS--SRIHTPFTVVAAKGYKMKTHKASAKR
        MASA+AT SF    L  SP  +R S     S        K+ +L LSSS +IS   V    L  K      S  S     FTV AAKGYKMKTHKASAKR
Subjt:  MASASATASF---GLRFSPLCSRSSVRVSRSSVRLPSSNKAYSLRLSSSHNISRFGV---ALLQKPFHIAPS--SRIHTPFTVVAAKGYKMKTHKASAKR

Query:  FRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQ
        FRVTG+GKIVRRRAGKQHLL KKNTKRK RLSK+  V RSDYDNVIGALPYLKVNR+
Subjt:  FRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQ

Q3M7I2 50S ribosomal protein L354.6e-1058.73Show/hide
Query:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL
        K+KT KA+AKRFR TG GKIVRR+A K HLL  K T +K + SKM  V+  D +NV   LPYL
Subjt:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL

Q8VZ55 50S ribosomal protein L35, chloroplastic8.6e-3363.82Show/hide
Query:  MASASATASFGLRFSPLCSRSSVRVS-RSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIA-PSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGR
        MAS S  AS  + F      SS +VS RSSV   +S       LSSSH+IS     L  K   +A P+S+    FTV A KGYKMKTHKASAKRFRVTGR
Subjt:  MASASATASFGLRFSPLCSRSSVRVS-RSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIA-PSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGR

Query:  GKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQA
        GKIVRRR+GKQHLL KKN KRKLRLSKM  V+RSDYDNVIGALPYLKVNR+A
Subjt:  GKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQA

Q8YRL9 50S ribosomal protein L354.6e-1058.73Show/hide
Query:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL
        K+KT KA+AKRFR TG GKIVRR+A K HLL  K T +K + SKM  V+  D +NV   LPYL
Subjt:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL

Arabidopsis top hitse value%identityAlignment
AT2G24090.1 Ribosomal protein L356.1e-3463.82Show/hide
Query:  MASASATASFGLRFSPLCSRSSVRVS-RSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIA-PSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGR
        MAS S  AS  + F      SS +VS RSSV   +S       LSSSH+IS     L  K   +A P+S+    FTV A KGYKMKTHKASAKRFRVTGR
Subjt:  MASASATASFGLRFSPLCSRSSVRVS-RSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIA-PSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGR

Query:  GKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQA
        GKIVRRR+GKQHLL KKN KRKLRLSKM  V+RSDYDNVIGALPYLKVNR+A
Subjt:  GKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCTGCTTCGGCGACGGCGTCCTTTGGTCTTAGGTTTTCCCCACTGTGCTCTCGCTCATCAGTTCGCGTCTCTCGTAGTTCTGTCCGGCTCCCGTCGTCGAACAA
GGCGTACTCGTTGAGGCTTAGTTCCTCCCACAACATTTCCAGGTTTGGAGTCGCTTTACTTCAGAAGCCATTTCACATTGCTCCCAGTTCTCGAATTCATACTCCCTTCA
CTGTTGTCGCTGCCAAAGGGTACAAAATGAAAACACACAAGGCTTCAGCAAAGCGATTCAGAGTAACGGGTCGAGGGAAAATCGTTCGAAGGAGAGCTGGAAAGCAGCAT
TTGCTGTACAAGAAGAACACAAAGAGGAAATTACGGCTTTCCAAAATGCACCCAGTGAGCCGAAGTGACTACGATAATGTGATTGGTGCTTTGCCGTACCTGAAGGTGAA
TAGGCAGGCCAAGTAG
mRNA sequenceShow/hide mRNA sequence
TTTGAGGCTCGTATAGATTGGCAAGAAGGAGAAAGACGAGACGCTTCCAAGCTTCAGGAGCCATGGCATCTGCTTCGGCGACGGCGTCCTTTGGTCTTAGGTTTTCCCCA
CTGTGCTCTCGCTCATCAGTTCGCGTCTCTCGTAGTTCTGTCCGGCTCCCGTCGTCGAACAAGGCGTACTCGTTGAGGCTTAGTTCCTCCCACAACATTTCCAGGTTTGG
AGTCGCTTTACTTCAGAAGCCATTTCACATTGCTCCCAGTTCTCGAATTCATACTCCCTTCACTGTTGTCGCTGCCAAAGGGTACAAAATGAAAACACACAAGGCTTCAG
CAAAGCGATTCAGAGTAACGGGTCGAGGGAAAATCGTTCGAAGGAGAGCTGGAAAGCAGCATTTGCTGTACAAGAAGAACACAAAGAGGAAATTACGGCTTTCCAAAATG
CACCCAGTGAGCCGAAGTGACTACGATAATGTGATTGGTGCTTTGCCGTACCTGAAGGTGAATAGGCAGGCCAAGTAGAGGTCATCACCCCGCCCCACTACACCTGCCTC
TACTCACTTCATGTGTAATCAAACGATTTTCAACTTTCCAGAACTCATCAAATGGAAAAATTCGATTGCTTAAAGATCTTATCTCTAATTTATTTCATCAGTTGATAATG
GTACGCGTTCTTTTAATTCCCTTCCTCTCTTTCTTTTTGCTAACTTGATAGGCTACAAAGATGGAGCTTTATTTCTTCTATAAATTATGAGGATCTGGGAAGTCTGCCCT
GTTTGCTCTGTTTCATCTCATAAACAAAGTAATCATATCTAATTTCTACTTATACAATAAACAAATTTGATTTCTTC
Protein sequenceShow/hide protein sequence
MASASATASFGLRFSPLCSRSSVRVSRSSVRLPSSNKAYSLRLSSSHNISRFGVALLQKPFHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQH
LLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK