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Carg10040 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10040
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr17:1152146..1153988
RNA-Seq ExpressionCarg10040
SyntenyCarg10040
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574964.1 hypothetical protein SDJN03_25603, partial [Cucurbita argyrosperma subsp. sororia]1.5e-04100Show/hide
Query:  ACRWVDCGGGSCNKMSRLAYKC
        ACRWVDCGGGSCNKMSRLAYKC
Subjt:  ACRWVDCGGGSCNKMSRLAYKC
KAG7013533.1 hypothetical protein SDJN02_23699, partial [Cucurbita argyrosperma subsp. argyrosperma]9.9e-41100Show/hide
Query:  WPFLCFVIVEGLCLHPSLFLLYCSSFNLRTLMISMIKALLDLTYLDEYIFHHIQACRWVDCGGGSCNKMSRLAYKCDCLKG
        WPFLCFVIVEGLCLHPSLFLLYCSSFNLRTLMISMIKALLDLTYLDEYIFHHIQACRWVDCGGGSCNKMSRLAYKCDCLKG
Subjt:  WPFLCFVIVEGLCLHPSLFLLYCSSFNLRTLMISMIKALLDLTYLDEYIFHHIQACRWVDCGGGSCNKMSRLAYKCDCLKG
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G14746.1 CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); Has 259 Blast hits to 234 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).6.1e-0450Show/hide
Query:  CRWVDCGGGSCNKMSRLAYKCDCLKG
        C+W+DCGGG CN      Y C+C +G
Subjt:  CRWVDCGGGSCNKMSRLAYKCDCLKG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGCCATTTCTCTGTTTTGTGATCGTTGAAGGGTTATGCCTTCACCCATCGCTGTTCTTGCTCTACTGCTCATCTTTCAATCTGCGAACGCTAATGATTTCGATGATAAA
GGCCCTGTTGGATTTAACTTATTTGGATGAGTACATATTTCATCATATTCAAGCTTGTCGATGGGTCGACTGTGGAGGCGGTTCGTGCAACAAGATGTCGCGGTTGGCAT
ACAAATGTGATTGTTTGAAGGGCTAA
mRNA sequenceShow/hide mRNA sequence
TGGCCATTTCTCTGTTTTGTGATCGTTGAAGGGTTATGCCTTCACCCATCGCTGTTCTTGCTCTACTGCTCATCTTTCAATCTGCGAACGCTAATGATTTCGATGATAAA
GGCCCTGTTGGATTTAACTTATTTGGATGAGTACATATTTCATCATATTCAAGCTTGTCGATGGGTCGACTGTGGAGGCGGTTCGTGCAACAAGATGTCGCGGTTGGCAT
ACAAATGTGATTGTTTGAAGGGCTAA
Protein sequenceShow/hide protein sequence
WPFLCFVIVEGLCLHPSLFLLYCSSFNLRTLMISMIKALLDLTYLDEYIFHHIQACRWVDCGGGSCNKMSRLAYKCDCLKG