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Carg10047 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10047
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEpidermal patterning factor-like protein
Genome locationCarg_Chr17:1128726..1129097
RNA-Seq ExpressionCarg10047
SyntenyCarg10047
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574959.1 EPIDERMAL PATTERNING FACTOR-like protein 4, partial [Cucurbita argyrosperma subsp. sororia]3.3e-6499.19Show/hide
Query:  MAVVLHHHHRRRPPRPTLLLLAALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTEETEFPAMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPG
        MAVVLHHH RRRPPRPTLLLLAALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTEETEFPAMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPG
Subjt:  MAVVLHHHHRRRPPRPTLLLLAALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTEETEFPAMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPG

Query:  LSLPSEYYPEAWRCKCGNSLYLP
        LSLPSEYYPEAWRCKCGNSLYLP
Subjt:  LSLPSEYYPEAWRCKCGNSLYLP

KAG6593874.1 EPIDERMAL PATTERNING FACTOR-like protein 4, partial [Cucurbita argyrosperma subsp. sororia]2.6e-3264.57Show/hide
Query:  MAVVL---HHHHRRRPPRPTLLLLA-ALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTEETEFPAMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIP
        MAVVL   HH+H RR   PTL L A  LLLL SAIAARPTPI ++             T  EE     +TRRRL G GSSPP CRSKCGSC+PCTAVH+P
Subjt:  MAVVL---HHHHRRRPPRPTLLLLA-ALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTEETEFPAMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIP

Query:  IQPGLSLPSEYYPEAWRCKCGNSLYLP
        I PGLSLP EYYPEAWRCKCGNSLY+P
Subjt:  IQPGLSLPSEYYPEAWRCKCGNSLYLP

KAG7013526.1 EPIDERMAL PATTERNING FACTOR-like protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-65100Show/hide
Query:  MAVVLHHHHRRRPPRPTLLLLAALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTEETEFPAMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPG
        MAVVLHHHHRRRPPRPTLLLLAALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTEETEFPAMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPG
Subjt:  MAVVLHHHHRRRPPRPTLLLLAALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTEETEFPAMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPG

Query:  LSLPSEYYPEAWRCKCGNSLYLP
        LSLPSEYYPEAWRCKCGNSLYLP
Subjt:  LSLPSEYYPEAWRCKCGNSLYLP

XP_023000566.1 EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita maxima]4.7e-3465.87Show/hide
Query:  MAVVL---HHHHRRRPPRPTLLLLAALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTEETEFPAMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPI
        MAVVL   HH+H RR   PTL L A +LLLASAIAARPTPI ++   +P        T  EE     +TRRRL G GSSPP CRSKCGSC+PCTAVH+PI
Subjt:  MAVVL---HHHHRRRPPRPTLLLLAALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTEETEFPAMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPI

Query:  QPGLSLPSEYYPEAWRCKCGNSLYLP
         PGLSLP EYYPEAWRCKCGNSLY+P
Subjt:  QPGLSLPSEYYPEAWRCKCGNSLYLP

XP_023513820.1 EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita pepo subsp. pepo]6.8e-3366.14Show/hide
Query:  MAVVL---HHHHRRRPPRPTLLLLA-ALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTEETEFPAMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIP
        MAVVL   HH+H RR   PTL L A  LLLLASAIAARPTPI ++   +P        T  EE     +TRRRL G GSSPP CRSKCGSC+PCTAVH+P
Subjt:  MAVVL---HHHHRRRPPRPTLLLLA-ALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTEETEFPAMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIP

Query:  IQPGLSLPSEYYPEAWRCKCGNSLYLP
        I PGLSLP EYYPEAWRCKCGNSLY+P
Subjt:  IQPGLSLPSEYYPEAWRCKCGNSLYLP

TrEMBL top hitse value%identityAlignment
A0A0A0LKT0 Epidermal patterning factor-like protein1.6e-3263.41Show/hide
Query:  MAVVLHHHHRRRPPRPTLLLLAALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTEETEFPAMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPG
        MA++L  HHRRR P    L L  LLLL S+IAARPTPI +     P + P         T+ P +TRRRL G GSSPP CRSKCGSC PCTAVH+PIQPG
Subjt:  MAVVLHHHHRRRPPRPTLLLLAALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTEETEFPAMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPG

Query:  LSLPSEYYPEAWRCKCGNSLYLP
        LSLP EYYPEAWRCKCGN+LY+P
Subjt:  LSLPSEYYPEAWRCKCGNSLYLP

A0A1S3BMN7 Epidermal patterning factor-like protein2.6e-3060.98Show/hide
Query:  MAVVLHHHHRRRPPRPTLLLLAALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTEETEFPAMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPG
        MAV+L HH RR     T L L  LLLL S+IAARPTPI +   +               T    +TRRRL G GSSPP CRSKCGSC PCTAVH+PIQPG
Subjt:  MAVVLHHHHRRRPPRPTLLLLAALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTEETEFPAMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPG

Query:  LSLPSEYYPEAWRCKCGNSLYLP
        LSLP EYYPEAWRCKCGN+LY+P
Subjt:  LSLPSEYYPEAWRCKCGNSLYLP

A0A5A7UQS2 Epidermal patterning factor-like protein2.6e-3060.98Show/hide
Query:  MAVVLHHHHRRRPPRPTLLLLAALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTEETEFPAMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPG
        MAV+L HH RR     T L L  LLLL S+IAARPTPI +   +               T    +TRRRL G GSSPP CRSKCGSC PCTAVH+PIQPG
Subjt:  MAVVLHHHHRRRPPRPTLLLLAALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTEETEFPAMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPG

Query:  LSLPSEYYPEAWRCKCGNSLYLP
        LSLP EYYPEAWRCKCGN+LY+P
Subjt:  LSLPSEYYPEAWRCKCGNSLYLP

A0A6J1ERG1 Epidermal patterning factor-like protein1.2e-3263.36Show/hide
Query:  MAVVL---HHHHRRRPPRPTLLLLAA-----LLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTEETEFPAMTRRRLRGLGSSPPICRSKCGSCSPCTA
        MAVVL   HH+H RR   PTL L A      LLLLASAIAARPTPI ++             T  EE     +TRRRL G GSSPP CRSKCGSC+PCTA
Subjt:  MAVVL---HHHHRRRPPRPTLLLLAA-----LLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTEETEFPAMTRRRLRGLGSSPPICRSKCGSCSPCTA

Query:  VHIPIQPGLSLPSEYYPEAWRCKCGNSLYLP
        VH+PI PGLSLP EYYPEAWRCKCGNSLY+P
Subjt:  VHIPIQPGLSLPSEYYPEAWRCKCGNSLYLP

A0A6J1KG67 Epidermal patterning factor-like protein2.3e-3465.87Show/hide
Query:  MAVVL---HHHHRRRPPRPTLLLLAALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTEETEFPAMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPI
        MAVVL   HH+H RR   PTL L A +LLLASAIAARPTPI ++   +P        T  EE     +TRRRL G GSSPP CRSKCGSC+PCTAVH+PI
Subjt:  MAVVL---HHHHRRRPPRPTLLLLAALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTEETEFPAMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPI

Query:  QPGLSLPSEYYPEAWRCKCGNSLYLP
         PGLSLP EYYPEAWRCKCGNSLY+P
Subjt:  QPGLSLPSEYYPEAWRCKCGNSLYLP

SwissProt top hitse value%identityAlignment
Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 68.1e-2168.33Show/hide
Query:  AMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPGLSLPSEYYPEAWRCKCGNSLYLP
        A  RR LRGLGSSPP C SKCG C+PC  VH+P+ PG  + +EYYPEAWRCKCGN LY+P
Subjt:  AMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPGLSLPSEYYPEAWRCKCGNSLYLP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 47.3e-2270.69Show/hide
Query:  TRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPGLSLPSEYYPEAWRCKCGNSLYLP
        + +R  G GSSPP CRSKCG C PC  VH+PIQPGLS+P EYYPEAWRCKCGN L++P
Subjt:  TRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPGLSLPSEYYPEAWRCKCGNSLYLP

Q7M1E7 Polygalacturonase1.3e-0745.1Show/hide
Query:  LGSSPPICRSKCGSCSPCTAVHIPIQPGLSLPSEYYPEAWRCKCGNSLYLP
        L SSPP C++KC  C PC    I + P  + P +YYP+ W C C N +Y P
Subjt:  LGSSPPICRSKCGSCSPCTAVHIPIQPGLSLPSEYYPEAWRCKCGNSLYLP

Q9FY19 Polygalacturonase1.3e-0745.1Show/hide
Query:  LGSSPPICRSKCGSCSPCTAVHIPIQPGLSLPSEYYPEAWRCKCGNSLYLP
        L SSPP C++KC  C PC    I + P  + P +YYP+ W C C N +Y P
Subjt:  LGSSPPICRSKCGSCSPCTAVHIPIQPGLSLPSEYYPEAWRCKCGNSLYLP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 51.6e-2149.11Show/hide
Query:  PTLLLLAALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTE--ETEFPA--MTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPGLSLPSEYYPEA
        PTL++ A LL  +S+ AA          S+   +  LG  K E   +  P   + ++RL G GS PP+CR KCG C PC AVH+PIQPGL +P EYYPEA
Subjt:  PTLLLLAALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTE--ETEFPA--MTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPGLSLPSEYYPEA

Query:  WRCKCGNSLYLP
        WRCKCGN L++P
Subjt:  WRCKCGNSLYLP

Arabidopsis top hitse value%identityAlignment
AT2G30370.1 allergen-related5.7e-2268.33Show/hide
Query:  AMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPGLSLPSEYYPEAWRCKCGNSLYLP
        A  RR LRGLGSSPP C SKCG C+PC  VH+P+ PG  + +EYYPEAWRCKCGN LY+P
Subjt:  AMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPGLSLPSEYYPEAWRCKCGNSLYLP

AT2G30370.2 allergen-related5.7e-2268.33Show/hide
Query:  AMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPGLSLPSEYYPEAWRCKCGNSLYLP
        A  RR LRGLGSSPP C SKCG C+PC  VH+P+ PG  + +EYYPEAWRCKCGN LY+P
Subjt:  AMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPGLSLPSEYYPEAWRCKCGNSLYLP

AT3G22820.1 allergen-related1.2e-2249.11Show/hide
Query:  PTLLLLAALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTE--ETEFPA--MTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPGLSLPSEYYPEA
        PTL++ A LL  +S+ AA          S+   +  LG  K E   +  P   + ++RL G GS PP+CR KCG C PC AVH+PIQPGL +P EYYPEA
Subjt:  PTLLLLAALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTE--ETEFPA--MTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPGLSLPSEYYPEA

Query:  WRCKCGNSLYLP
        WRCKCGN L++P
Subjt:  WRCKCGNSLYLP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)5.2e-2370.69Show/hide
Query:  TRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPGLSLPSEYYPEAWRCKCGNSLYLP
        + +R  G GSSPP CRSKCG C PC  VH+PIQPGLS+P EYYPEAWRCKCGN L++P
Subjt:  TRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPGLSLPSEYYPEAWRCKCGNSLYLP

AT4G37810.1 unknown protein8.0e-0834.38Show/hide
Query:  FTKTEETEFPAMTRRRLRGL-GSSPPIC-RSKCGSCSPCTAVHIPIQPGLSLPS------------------------EYYPEAWRCKCGNSLYLP
        FTK+ + +   M    +RGL GS PP C R +C SC  C A+ +P  P   L S                         Y P +W+CKCGNS+Y P
Subjt:  FTKTEETEFPAMTRRRLRGL-GSSPPIC-RSKCGSCSPCTAVHIPIQPGLSLPS------------------------EYYPEAWRCKCGNSLYLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGTAGTCCTCCACCACCACCACCGCCGCCGTCCTCCTCGCCCAACCCTTCTTCTTCTCGCCGCGCTCCTCCTCCTCGCCTCCGCCATTGCCGCCCGCCCCACCCC
AATCGGTAAGTCCCTAAACTCAATTCCTCTAATTAACCCATTTCTGGGTTTTACAAAAACAGAGGAAACAGAGTTTCCAGCTATGACACGGCGGAGACTCCGCGGGCTTG
GGTCGTCCCCACCGATTTGTAGATCCAAGTGCGGCAGTTGCTCGCCGTGCACGGCGGTGCACATCCCAATTCAGCCGGGACTGAGTTTGCCGTCGGAGTATTACCCAGAA
GCGTGGCGGTGCAAATGCGGCAACTCCCTTTATTTGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGTAGTCCTCCACCACCACCACCGCCGCCGTCCTCCTCGCCCAACCCTTCTTCTTCTCGCCGCGCTCCTCCTCCTCGCCTCCGCCATTGCCGCCCGCCCCACCCC
AATCGGTAAGTCCCTAAACTCAATTCCTCTAATTAACCCATTTCTGGGTTTTACAAAAACAGAGGAAACAGAGTTTCCAGCTATGACACGGCGGAGACTCCGCGGGCTTG
GGTCGTCCCCACCGATTTGTAGATCCAAGTGCGGCAGTTGCTCGCCGTGCACGGCGGTGCACATCCCAATTCAGCCGGGACTGAGTTTGCCGTCGGAGTATTACCCAGAA
GCGTGGCGGTGCAAATGCGGCAACTCCCTTTATTTGCCATGA
Protein sequenceShow/hide protein sequence
MAVVLHHHHRRRPPRPTLLLLAALLLLASAIAARPTPIGKSLNSIPLINPFLGFTKTEETEFPAMTRRRLRGLGSSPPICRSKCGSCSPCTAVHIPIQPGLSLPSEYYPE
AWRCKCGNSLYLP