; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg10069 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10069
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDNA-directed RNA polymerase V subunit 7
Genome locationCarg_Chr17:990610..991137
RNA-Seq ExpressionCarg10069
SyntenyCarg10069
Gene Ontology termsGO:0006352 - DNA-templated transcription, initiation (biological process)
GO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold
IPR036898 - RNA polymerase Rpb7-like, N-terminal domain superfamily
IPR045113 - RNA polymerase Rpb7-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150402.1 DNA-directed RNA polymerase V subunit 7 [Cucumis sativus]3.7e-9398.29Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPV+FSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENP+F+NDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

XP_008465191.1 PREDICTED: DNA-directed RNA polymerase V subunit 7 [Cucumis melo]8.3e-9398.29Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPV FSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENP+F+NDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

XP_022138329.1 DNA-directed RNA polymerase V subunit 7 [Momordica charantia]2.8e-9398.86Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIP+ENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENP+FMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

XP_022958784.1 DNA-directed RNA polymerase V subunit 7 [Cucurbita moschata]5.7e-94100Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

XP_023006755.1 DNA-directed RNA polymerase V subunit 7 [Cucurbita maxima]7.5e-9499.43Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPV+FSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

TrEMBL top hitse value%identityAlignment
A0A0A0LKQ1 Uncharacterized protein1.8e-9398.29Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPV+FSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENP+F+NDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

A0A5D3CAJ0 DNA-directed RNA polymerase V subunit 74.0e-9398.29Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPV FSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENP+F+NDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

A0A6J1C9U9 DNA-directed RNA polymerase V subunit 71.4e-9398.86Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIP+ENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENP+FMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

A0A6J1H315 DNA-directed RNA polymerase V subunit 72.8e-94100Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

A0A6J1KYN2 DNA-directed RNA polymerase V subunit 73.6e-9499.43Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGV
        MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPV+FSGITFKLYRGEILEGVVHKVLKHGV
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGV

Query:  FLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        FLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
Subjt:  FLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

SwissProt top hitse value%identityAlignment
A6QRA1 DNA-directed RNA polymerase V subunit 75.1e-7772.73Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQ-TGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHG
        MFLKVQLPWNV+IPAEN+DAKGLML+R+I++ LL+ FA+KKATK+LGY++AVTTL+ IGEGK+R+ TG+VLFPV+FSG+TFK+++GEI+ GVVHKVLKHG
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQ-TGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHG

Query:  VFLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        VF+RCGP+EN+YLSY KMPDY+Y+PGENP+FMN+K S+I+ +  VR +VIG KW+E EREFQAL SLEGDYLGP+S
Subjt:  VFLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

P38421 DNA-directed RNA polymerase II subunit 78.0e-1432.12Show/hide
Query:  KGLMLQRSIIIRLLDEFATKKATKDL--------GYFLAVTTLENIGEGKVRQ-TGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENIY
        + + L      R L E    K  KD+        G+ +A+T ++ IG+G +R  TG V FPV +  + F+ ++GEILE VV  V K G F   GPV+   
Subjt:  KGLMLQRSIIIRLLDEFATKKATKDL--------GYFLAVTTLENIGEGKVRQ-TGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENIY

Query:  LSYLKMPDYRYVPGENPLF-MNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
          +L   D  +  G+ P +  +D   KI+K+  VR  +IGT+ ++A   F  + +++ D+LG ++
Subjt:  LSYLKMPDYRYVPGENPLF-MNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS

P46279 DNA-directed RNA polymerase II subunit RPB71.5e-1538.17Show/hide
Query:  GYFLAVTTLENIGEGKVRQ-TGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENIYLSYLKMPDYRYVPGENPLF-MNDKLSKIEKDVVV
        G+ +AVT +ENIG+G +R  TG V FPV +  + F+ ++GEILE VV  V K G F   GPV+    ++L   D  +  G+ P +  +D   KI+KD  V
Subjt:  GYFLAVTTLENIGEGKVRQ-TGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENIYLSYLKMPDYRYVPGENPLF-MNDKLSKIEKDVVV

Query:  RFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        R  +IGT+ ++A   F  + +++ D+LG ++
Subjt:  RFIVIGTKWLEAEREFQALVSLEGDYLGPVS

Q6NML5 DNA-directed RNA polymerase subunit 7-like protein2.9e-2438.34Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGK--------VRQTGDVLFPVVFSGITFKLYRGEILEGVV
        MF +V++  +V I A++L+  G    + I+ RLL +   +KA ++ G++L +T L++IG  K          Q   + FPV F+  TF   RG+IL+G V
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGK--------VRQTGDVLFPVVFSGITFKLYRGEILEGVV

Query:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPLFMNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPVS
         KVL +G F+R GP+   YLS LKMP Y YV       E P F  D LSKI   VVVRF V+  ++ E       ++  L +LEG+   GP+S
Subjt:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPLFMNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPVS

Q8LE42 DNA-directed RNA polymerase IV subunit 73.7e-5961.49Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVR-QTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHG
        MF+KV+LPW+V IPAE++D  GLMLQR+I+IRLL+ F+ +KATKDLGY +  T LENIGEGK++ QTG++ FPVVF+GI FK+++GEI+ GVVHKV K G
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVR-QTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHG

Query:  VFLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP
        VFL+ GP E IYLS++KMP Y ++PGENP FMN  +S+I+    VRF+V+ T+W EAE++F AL S++GD LGP
Subjt:  VFLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP

Arabidopsis top hitse value%identityAlignment
AT3G22900.1 RNA polymerase Rpb7-like, N-terminal domain2.6e-6061.49Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVR-QTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHG
        MF+KV+LPW+V IPAE++D  GLMLQR+I+IRLL+ F+ +KATKDLGY +  T LENIGEGK++ QTG++ FPVVF+GI FK+++GEI+ GVVHKV K G
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVR-QTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHG

Query:  VFLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP
        VFL+ GP E IYLS++KMP Y ++PGENP FMN  +S+I+    VRF+V+ T+W EAE++F AL S++GD LGP
Subjt:  VFLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGP

AT4G14520.1 DNA-directed RNA polymerase II-related2.1e-2538.34Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGK--------VRQTGDVLFPVVFSGITFKLYRGEILEGVV
        MF +V++  +V I A++L+  G    + I+ RLL +   +KA ++ G++L +T L++IG  K          Q   + FPV F+  TF   RG+IL+G V
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGK--------VRQTGDVLFPVVFSGITFKLYRGEILEGVV

Query:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPLFMNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPVS
         KVL +G F+R GP+   YLS LKMP Y YV       E P F  D LSKI   VVVRF V+  ++ E       ++  L +LEG+   GP+S
Subjt:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPLFMNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPVS

AT4G14520.2 DNA-directed RNA polymerase II-related2.1e-2538.34Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGK--------VRQTGDVLFPVVFSGITFKLYRGEILEGVV
        MF +V++  +V I A++L+  G    + I+ RLL +   +KA ++ G++L +T L++IG  K          Q   + FPV F+  TF   RG+IL+G V
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGK--------VRQTGDVLFPVVFSGITFKLYRGEILEGVV

Query:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPLFMNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPVS
         KVL +G F+R GP+   YLS LKMP Y YV       E P F  D LSKI   VVVRF V+  ++ E       ++  L +LEG+   GP+S
Subjt:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPLFMNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPVS

AT4G14520.3 DNA-directed RNA polymerase II-related2.1e-2538.34Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGK--------VRQTGDVLFPVVFSGITFKLYRGEILEGVV
        MF +V++  +V I A++L+  G    + I+ RLL +   +KA ++ G++L +T L++IG  K          Q   + FPV F+  TF   RG+IL+G V
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGK--------VRQTGDVLFPVVFSGITFKLYRGEILEGVV

Query:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPLFMNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPVS
         KVL +G F+R GP+   YLS LKMP Y YV       E P F  D LSKI   VVVRF V+  ++ E       ++  L +LEG+   GP+S
Subjt:  HKVLKHGVFLRCGPVENIYLSYLKMPDYRYV-----PGENPLFMNDKLSKIEKDVVVRFIVIGTKWLE----AEREFQALVSLEGD-YLGPVS

AT4G14660.1 RNA polymerase Rpb7-like, N-terminal domain3.6e-7872.73Show/hide
Query:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQ-TGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHG
        MFLKVQLPWNV+IPAEN+DAKGLML+R+I++ LL+ FA+KKATK+LGY++AVTTL+ IGEGK+R+ TG+VLFPV+FSG+TFK+++GEI+ GVVHKVLKHG
Subjt:  MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQ-TGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHG

Query:  VFLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS
        VF+RCGP+EN+YLSY KMPDY+Y+PGENP+FMN+K S+I+ +  VR +VIG KW+E EREFQAL SLEGDYLGP+S
Subjt:  VFLRCGPVENIYLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCTCAAAGTGCAGCTGCCATGGAATGTCATAATCCCTGCTGAAAACTTAGATGCAAAGGGCTTGATGCTCCAAAGGTCTATTATAATCCGTCTGCTAGATGAATT
TGCCACAAAAAAGGCCACAAAGGATCTCGGTTATTTCCTCGCAGTTACGACTCTAGAAAATATAGGAGAAGGGAAAGTTCGACAGACGGGCGACGTCTTGTTTCCAGTTG
TTTTTAGTGGTATCACCTTCAAGCTTTATAGGGGAGAGATCTTGGAGGGGGTTGTTCACAAGGTTCTCAAGCATGGTGTTTTCTTGAGATGTGGCCCTGTTGAGAACATA
TATCTCTCTTATCTGAAAATGCCAGATTACCGCTATGTGCCGGGCGAGAATCCCCTGTTCATGAACGACAAGCTTTCAAAAATTGAGAAAGATGTAGTCGTACGTTTTAT
CGTCATTGGAACGAAGTGGCTCGAGGCAGAAAGGGAGTTTCAGGCACTGGTGAGTTTGGAGGGTGATTATCTAGGGCCAGTTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCTCAAAGTGCAGCTGCCATGGAATGTCATAATCCCTGCTGAAAACTTAGATGCAAAGGGCTTGATGCTCCAAAGGTCTATTATAATCCGTCTGCTAGATGAATT
TGCCACAAAAAAGGCCACAAAGGATCTCGGTTATTTCCTCGCAGTTACGACTCTAGAAAATATAGGAGAAGGGAAAGTTCGACAGACGGGCGACGTCTTGTTTCCAGTTG
TTTTTAGTGGTATCACCTTCAAGCTTTATAGGGGAGAGATCTTGGAGGGGGTTGTTCACAAGGTTCTCAAGCATGGTGTTTTCTTGAGATGTGGCCCTGTTGAGAACATA
TATCTCTCTTATCTGAAAATGCCAGATTACCGCTATGTGCCGGGCGAGAATCCCCTGTTCATGAACGACAAGCTTTCAAAAATTGAGAAAGATGTAGTCGTACGTTTTAT
CGTCATTGGAACGAAGTGGCTCGAGGCAGAAAGGGAGTTTCAGGCACTGGTGAGTTTGGAGGGTGATTATCTAGGGCCAGTTTCTTAA
Protein sequenceShow/hide protein sequence
MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVVFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENI
YLSYLKMPDYRYVPGENPLFMNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS