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Carg10077 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10077
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr17:956615..956959
RNA-Seq ExpressionCarg10077
SyntenyCarg10077
Gene Ontology termsGO:0005622 - intracellular (cellular component)
InterPro domainsIPR040381 - Uncharacterized protein At4g14450-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574927.1 putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.4e-5698.25Show/hide
Query:  MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF
        MADSHRRTSTPAGASRRHPPP QQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWA NSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF
Subjt:  MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF

Query:  QYDSGPMDPRFIPA
        QYDSGPMDPRFIPA
Subjt:  QYDSGPMDPRFIPA

KAG7013496.1 putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-58100Show/hide
Query:  MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF
        MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF
Subjt:  MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF

Query:  QYDSGPMDPRFIPA
        QYDSGPMDPRFIPA
Subjt:  QYDSGPMDPRFIPA

XP_022958791.1 uncharacterized protein At4g14450, chloroplastic-like [Cucurbita moschata]4.0e-5697.37Show/hide
Query:  MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF
        MADSHRRTSTPAGASRRHPPP QQP CFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWA NSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF
Subjt:  MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF

Query:  QYDSGPMDPRFIPA
        QYDSGPMDPRFIPA
Subjt:  QYDSGPMDPRFIPA

XP_023006762.1 uncharacterized protein At4g14450, chloroplastic-like [Cucurbita maxima]5.5e-5392.98Show/hide
Query:  MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF
        MADSHRR STPAG SR HPPP QQP CFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWA NSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF
Subjt:  MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF

Query:  QYDSGPMDPRFIPA
        QYDSGPMD RF+PA
Subjt:  QYDSGPMDPRFIPA

XP_023548297.1 uncharacterized protein At4g14450, chloroplastic-like [Cucurbita pepo subsp. pepo]7.6e-5594.74Show/hide
Query:  MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF
        M DSHRRTSTP GASRRHPPP QQP CFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWA NSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF
Subjt:  MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF

Query:  QYDSGPMDPRFIPA
        QYDSGPMDPRF+PA
Subjt:  QYDSGPMDPRFIPA

TrEMBL top hitse value%identityAlignment
A0A1S3CDB1 uncharacterized protein At4g14450, chloroplastic-like7.0e-3060.61Show/hide
Query:  MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSS-------------------NHKE
        MADSHRRTS     + RH   PQQP+  + RAPASLQINR DWKVAIPLL+PLVSPSSPK+IQ W  +S E SS SS                   +HKE
Subjt:  MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSS-------------------NHKE

Query:  SEPEKPPVFKKWQHPAAPFQYDSGPMDPRFIP
         E EK PVFKKWQHPAAPF YDSGP  PRF+P
Subjt:  SEPEKPPVFKKWQHPAAPFQYDSGPMDPRFIP

A0A6J1ER11 uncharacterized protein At4g14450, chloroplastic-like2.3e-2864.71Show/hide
Query:  MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSS-----NHKESEPEKPPVFKKWQH
        MA+S RR   P+G + R     QQP+  + RAPASLQI+R DWKVAIPLL+PLVSPSSP EIQ W ++SG  SS+SS     +HKESEPEKPPVFKKWQH
Subjt:  MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSS-----NHKESEPEKPPVFKKWQH

Query:  PAAPFQYDSGPMDPR-FIP
        PAAPF YDSG   PR F+P
Subjt:  PAAPFQYDSGPMDPR-FIP

A0A6J1H320 uncharacterized protein At4g14450, chloroplastic-like2.0e-5697.37Show/hide
Query:  MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF
        MADSHRRTSTPAGASRRHPPP QQP CFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWA NSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF
Subjt:  MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF

Query:  QYDSGPMDPRFIPA
        QYDSGPMDPRFIPA
Subjt:  QYDSGPMDPRFIPA

A0A6J1KKB8 uncharacterized protein At4g14450, chloroplastic-like2.9e-2864.46Show/hide
Query:  MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSS-------NHKESEPEKPPVFKKW
        MA+S RR S   GA+ R     QQP+  + RAPASLQI+R DWKVAIPLL+PLVSPSSP EIQ W ++SG  SS+SS       +HKESEPEKPPVFKKW
Subjt:  MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSS-------NHKESEPEKPPVFKKW

Query:  QHPAAPFQYDSGPMDPR-FIP
        QHPAAPF YDSG   PR F+P
Subjt:  QHPAAPFQYDSGPMDPR-FIP

A0A6J1KWP9 uncharacterized protein At4g14450, chloroplastic-like2.6e-5392.98Show/hide
Query:  MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF
        MADSHRR STPAG SR HPPP QQP CFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWA NSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF
Subjt:  MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF

Query:  QYDSGPMDPRFIPA
        QYDSGPMD RF+PA
Subjt:  QYDSGPMDPRFIPA

SwissProt top hitse value%identityAlignment
Q6NN02 Uncharacterized protein At4g14450, chloroplastic6.8e-0637.5Show/hide
Query:  MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF
        MA + +RTS+ A ++ R     Q+ A      P S      +W VAIPLL+PL +PS         S+     + +    E E +K PVFKKWQHPA+PF
Subjt:  MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF

Query:  QYDSGPMDPRFI
         Y+     P FI
Subjt:  QYDSGPMDPRFI

Arabidopsis top hitse value%identityAlignment
AT1G04330.1 unknown protein1.2e-1046.43Show/hide
Query:  RAPASLQIN--RPDWKVAIPLLTPLVSPSS------PKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPFQYDSGP
        RAP  L+IN    +WKVAIPLL+P  SP         +E Q W                 E EKPPVFKKWQHPAAPF Y   P
Subjt:  RAPASLQIN--RPDWKVAIPLLTPLVSPSS------PKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPFQYDSGP

AT3G23170.1 unknown protein2.2e-0739.25Show/hide
Query:  STPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPL-VSP-SSPKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPFQYDSGP
        S+ +G  RR P    +        PA+   N  +W  AIPLL+PL +SP SSP +      N     +          EK PVFKKWQHPAAPF Y+S  
Subjt:  STPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPL-VSP-SSPKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPFQYDSGP

Query:  MDPRFIP
          P F+P
Subjt:  MDPRFIP

AT4G14450.1 unknown protein4.8e-0737.5Show/hide
Query:  MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF
        MA + +RTS+ A ++ R     Q+ A      P S      +W VAIPLL+PL +PS         S+     + +    E E +K PVFKKWQHPA+PF
Subjt:  MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPF

Query:  QYDSGPMDPRFI
         Y+     P FI
Subjt:  QYDSGPMDPRFI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATTCACACAGACGAACCTCCACTCCCGCCGGTGCCTCTCGCCGCCATCCGCCGCCGCCGCAGCAGCCAGCCTGCTTTCGGAGCCGGGCGCCAGCGTCCCTGCA
AATCAACCGCCCCGATTGGAAGGTCGCCATCCCTCTCTTGACCCCGCTCGTCTCCCCATCCTCACCCAAAGAGATACAAACTTGGGCGTCTAATTCCGGCGAAGGATCCT
CCAATTCTTCAAATCATAAAGAATCGGAGCCGGAGAAGCCGCCGGTTTTTAAGAAATGGCAGCATCCGGCGGCCCCTTTTCAGTACGATTCCGGCCCTATGGATCCCAGA
TTCATCCCTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGATTCACACAGACGAACCTCCACTCCCGCCGGTGCCTCTCGCCGCCATCCGCCGCCGCCGCAGCAGCCAGCCTGCTTTCGGAGCCGGGCGCCAGCGTCCCTGCA
AATCAACCGCCCCGATTGGAAGGTCGCCATCCCTCTCTTGACCCCGCTCGTCTCCCCATCCTCACCCAAAGAGATACAAACTTGGGCGTCTAATTCCGGCGAAGGATCCT
CCAATTCTTCAAATCATAAAGAATCGGAGCCGGAGAAGCCGCCGGTTTTTAAGAAATGGCAGCATCCGGCGGCCCCTTTTCAGTACGATTCCGGCCCTATGGATCCCAGA
TTCATCCCTGCTTAG
Protein sequenceShow/hide protein sequence
MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPFQYDSGPMDPR
FIPA