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Carg10096 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10096
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description60S ribosomal protein L14-2-like
Genome locationCarg_Chr17:832421..834046
RNA-Seq ExpressionCarg10096
SyntenyCarg10096
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0007018 - microtubule-based movement (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0003774 - motor activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008017 - microtubule binding (molecular function)
InterPro domainsIPR002784 - Ribosomal protein L14e domain
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR039660 - Ribosomal protein L14
IPR041985 - Ribosomal protein L14, KOW motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAA83469.1 Csf-1, partial [Cucumis sativus]8.9e-6396.99Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA
        MPFKRYVEIGR+AL+NYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWE+SSWGRKLIVKKRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
        SLNDFDRFKLMLAKIKRAGLVRQEL+KLKKAEA
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA

KAG6574906.1 Kinesin-like protein KIN-10A, partial [Cucurbita argyrosperma subsp. sororia]6.1e-64100Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA
        MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
        SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA

KAG6593830.1 Kinesin-like protein KIN-10A, partial [Cucurbita argyrosperma subsp. sororia]6.1e-64100Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA
        MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
        SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA

XP_022959508.1 60S ribosomal protein L14-2-like [Cucurbita moschata]6.1e-64100Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA
        MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
        SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA

XP_023006320.1 60S ribosomal protein L14-2-like [Cucurbita maxima]2.3e-6399.25Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA
        MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWE+SSWGRKLIVKKRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
        SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA

TrEMBL top hitse value%identityAlignment
A0A0A0LIH9 Ribosomal_L14e domain-containing protein4.3e-6396.99Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA
        MPFKRYVEIGR+AL+NYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWE+SSWGRKLIVKKRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
        SLNDFDRFKLMLAKIKRAGLVRQEL+KLKKAEA
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA

A0A6J1HJJ9 60S ribosomal protein L14-2-like3.0e-64100Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA
        MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
        SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA

A0A6J1KDZ6 60S ribosomal protein L14-2-like3.0e-64100Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA
        MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
        SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA

A0A6J1KZT6 60S ribosomal protein L14-2-like1.1e-6399.25Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA
        MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWE+SSWGRKLIVKKRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
        SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA

Q9SXL9 Csf-1 protein (Fragment)4.3e-6396.99Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA
        MPFKRYVEIGR+AL+NYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWE+SSWGRKLIVKKRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
        SLNDFDRFKLMLAKIKRAGLVRQEL+KLKKAEA
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA

SwissProt top hitse value%identityAlignment
O46160 60S ribosomal protein L143.1e-2650.38Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAP--DMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKR
        M F+R+VEIGRVA   YG D GKLV IVDVIDQNRALVD P   + R  MNFK L LT++K       K   + +A +  ++ KKWE+S   +K+  K++
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAP--DMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKR

Query:  RASLNDFDRFKLMLAKIKRAGLVRQELSKLKKA
        R +L DF+RFKLM AK  R  L++ E  KL+KA
Subjt:  RASLNDFDRFKLMLAKIKRAGLVRQELSKLKKA

P55844 Probable 60S ribosomal protein L144.6e-5481.2Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA
        MPFKR+VEIGRVAL+NYG+DYG+LVVIVDVIDQ RALVDAPDMERS +NFKRLSLTD+KIDIKRVPKKK+LI+A++A DV+ KW  SSWGRKLIVKK RA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
        +LNDFDRFK+MLAKIKRA  VRQEL+KLKK  A
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA

Q7XYA7 60S ribosomal protein L145.8e-2548.48Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPD--MERSQMNFKRLSLTDIKI-DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKK
        M F R+VE GRVALV+YGE   KLVVIVD++DQNR LVD+P   ++R  +N KR++LT IK+ DI R     E+     A  V + +  S WG+KL  ++
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPD--MERSQMNFKRLSLTDIKI-DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKK

Query:  RRASLNDFDRFKLMLAKIKRAGLVRQELSKLK
        +RA+L+DF RFK+M+A++K++  +  EL+KLK
Subjt:  RRASLNDFDRFKLMLAKIKRAGLVRQELSKLK

Q9SIM4 60S ribosomal protein L14-11.2e-5484.62Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA
        M FKR+VEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDMER QMN KRLSLTDI IDI RVPKKK LIEAM+  DV+ KWE SSWGRKLIV+KRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKK
        +LNDFDRFK+MLAKIKRAG+VRQEL+KLK+
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKK

Q9T043 60S ribosomal protein L14-23.2e-5585.38Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA
        M FKRYVEIGRVALVNYGED+GKLVVIVDV+DQNRALVDAPDMER QMNFKRLSLTDI IDI RVPKKK LIEAM+  DV+ KWE SSWGRKLIV+KRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKK
        +LNDFDRFK+MLAKIK+AG+VRQEL+KLKK
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKK

Arabidopsis top hitse value%identityAlignment
AT2G20450.1 Ribosomal protein L148.6e-5684.62Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA
        M FKR+VEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDMER QMN KRLSLTDI IDI RVPKKK LIEAM+  DV+ KWE SSWGRKLIV+KRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKK
        +LNDFDRFK+MLAKIKRAG+VRQEL+KLK+
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKK

AT4G27090.1 Ribosomal protein L142.3e-5685.38Show/hide
Query:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA
        M FKRYVEIGRVALVNYGED+GKLVVIVDV+DQNRALVDAPDMER QMNFKRLSLTDI IDI RVPKKK LIEAM+  DV+ KWE SSWGRKLIV+KRRA
Subjt:  MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKK
        +LNDFDRFK+MLAKIK+AG+VRQEL+KLKK
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELSKLKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGTTCAAGAGGTACGTCGAGATCGGGAGGGTTGCCCTCGTCAACTACGGTGAAGATTACGGAAAGCTTGTTGTAATCGTTGATGTCATTGACCAGAATCGGGCTCT
GGTTGATGCCCCTGATATGGAGCGGTCTCAAATGAATTTTAAGAGACTTTCCCTGACAGATATCAAAATTGATATTAAGAGGGTCCCTAAGAAGAAGGAGTTGATTGAAG
CAATGAAAGCCGGGGATGTTCAGAAGAAATGGGAGGATAGCTCCTGGGGAAGGAAATTGATTGTTAAGAAGAGAAGAGCCTCTCTCAACGACTTCGACAGGTTCAAGCTT
ATGTTGGCAAAGATTAAGAGGGCTGGATTGGTTAGACAAGAGCTCTCCAAGTTGAAGAAGGCCGAGGCTTAG
mRNA sequenceShow/hide mRNA sequence
TGAGAGCCCTAGACAAAACTTATTATAAAATGCAGTAGGACAGCGTCTTCTCCTTCCTTCCTCCATCGGCGCCGCTGCTCTCCACAGTTGTAAACCTCCCACAAGCCACA
AGAATGCCGTTCAAGAGGTACGTCGAGATCGGGAGGGTTGCCCTCGTCAACTACGGTGAAGATTACGGAAAGCTTGTTGTAATCGTTGATGTCATTGACCAGAATCGGGC
TCTGGTTGATGCCCCTGATATGGAGCGGTCTCAAATGAATTTTAAGAGACTTTCCCTGACAGATATCAAAATTGATATTAAGAGGGTCCCTAAGAAGAAGGAGTTGATTG
AAGCAATGAAAGCCGGGGATGTTCAGAAGAAATGGGAGGATAGCTCCTGGGGAAGGAAATTGATTGTTAAGAAGAGAAGAGCCTCTCTCAACGACTTCGACAGGTTCAAG
CTTATGTTGGCAAAGATTAAGAGGGCTGGATTGGTTAGACAAGAGCTCTCCAAGTTGAAGAAGGCCGAGGCTTAGAGGTTCATTTTTTCAACGGATTCTCTCATTTTGCT
GTCATCTTTCATTTAACTACTGTAGTAGGTCTTTGTTTTTTTGTTCCCAACTTTTGTTAGCAGTCTTTGTGTTCAACTTCTCACATTTAAATTATAGTACGCCAATTTCT
TATTTGGATTTCAGTAGTCACAGCTTTATCATTCTCTTATTTATAAGGTCCTTGTTTAAATTGGCTTGAATGATAGTACTGGTTTTTCATTTCTTTAAGAAAGTTACTTT
ACTGTGAGTTAATGCCTCTATGATTTGCCCATTATTCTTCA
Protein sequenceShow/hide protein sequence
MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKL
MLAKIKRAGLVRQELSKLKKAEA