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Carg10120 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10120
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B
Genome locationCarg_Chr17:702685..706480
RNA-Seq ExpressionCarg10120
SyntenyCarg10120
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domainsIPR009346 - GRIM-19


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147172.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucumis sativus]4.4e-7699.3Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW
        WKSYLEYEAEVMKDVPGWKVGE+VYNSGKWMPPATGELRPEVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW

XP_008460702.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucumis melo]2.2e-7598.6Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEAAIRKKPGMASVKDMPILQDGPPPGGF PVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW
        WKSYLEYEAEVMKDVPGWKVGE+VYNSGKWMPPATGELRPEVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW

XP_022959289.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucurbita moschata]1.2e-76100Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW
        WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW

XP_023000560.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucurbita maxima]9.8e-7698.6Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKY+ARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW
        WKSYLEYEAEVMKDVPGWKVGE+VYNSGKWMPPATGELRPEVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW

XP_023514672.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B-like [Cucurbita pepo subsp. pepo]2.6e-7699.3Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKY+ARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW
        WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW

TrEMBL top hitse value%identityAlignment
A0A0A0LLE8 Uncharacterized protein2.1e-7699.3Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW
        WKSYLEYEAEVMKDVPGWKVGE+VYNSGKWMPPATGELRPEVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW

A0A1S3CD20 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B1.1e-7598.6Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEAAIRKKPGMASVKDMPILQDGPPPGGF PVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW
        WKSYLEYEAEVMKDVPGWKVGE+VYNSGKWMPPATGELRPEVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW

A0A6J1CAH0 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B1.4e-7597.9Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFG FSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW
        WKSYLEYEAEVMKDVPGWKVGE+VYNSGKWMPPATGELRP+VW
Subjt:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW

A0A6J1H7M2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B5.6e-77100Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW
        WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW

A0A6J1KIP8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B4.8e-7698.6Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKY+ARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW
        WKSYLEYEAEVMKDVPGWKVGE+VYNSGKWMPPATGELRPEVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW

SwissProt top hitse value%identityAlignment
O49313 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B4.0e-7289.51Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEA IRKKPGMASVKDMP+LQDGPPPGGFAPVRYARRI   GPSAMAIFLT  GAF+WGMYQVG+GNKIRRALKEEKYAARRAILP+LQAEEDERFV E
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW
        WK YLEYEA+VMKDVPGWKVGENVYNSG+WMPPATGELRP+VW
Subjt:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW

Q0MQ89 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 133.1e-2444.54Show/hide
Query:  ILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWK
        + QD PPPGG+ P+ Y R +P +G S  ++     G   +G + + K N+ RR L+ E + AR A+LP+LQAE D R ++  +  LE EA +MKDVP WK
Subjt:  ILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWK

Query:  VGENVYNSGKWMPPATGEL
        VGE+V+++ +W+PP  GEL
Subjt:  VGENVYNSGKWMPPATGEL

Q8RWA7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-A3.8e-7086.71Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEA IR KPGMASVKDMP+LQDGPPPGGFAPVRYARRI   GPSAMA+FL   GAF+WGMYQVG+GNKIRRALKEEKYAARR ILP+LQAEEDERFV E
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW
        WK YLEYEA+VMKDVPGWKVGENVYNSG+WMPPATGELRP+VW
Subjt:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW

Q95KV7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 131.4e-2445.38Show/hide
Query:  ILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWK
        + QD PP GG+ P+ Y R +P +G S  ++F    GA  +G + + K N+ RR L+ E + AR A++P+LQAE+D R ++  +  LE EA VMKDVPGWK
Subjt:  ILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWK

Query:  VGENVYNSGKWMPPATGEL
        VGE+V+++ +W+ P  GEL
Subjt:  VGENVYNSGKWMPPATGEL

Q9P0J0 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 133.1e-2444.54Show/hide
Query:  ILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWK
        + QD PPPGG+ P+ Y R +P +G S  ++     G   +G + + K N+ RR L+ E + AR A+LP+LQAE D R ++  +  LE EA +MKDVP WK
Subjt:  ILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWK

Query:  VGENVYNSGKWMPPATGEL
        VGE+V+++ +W+PP  GEL
Subjt:  VGENVYNSGKWMPPATGEL

Arabidopsis top hitse value%identityAlignment
AT1G04630.1 GRIM-19 protein2.7e-7186.71Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEA IR KPGMASVKDMP+LQDGPPPGGFAPVRYARRI   GPSAMA+FL   GAF+WGMYQVG+GNKIRRALKEEKYAARR ILP+LQAEEDERFV E
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW
        WK YLEYEA+VMKDVPGWKVGENVYNSG+WMPPATGELRP+VW
Subjt:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW

AT2G33220.1 GRIM-19 protein2.9e-7389.51Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEA IRKKPGMASVKDMP+LQDGPPPGGFAPVRYARRI   GPSAMAIFLT  GAF+WGMYQVG+GNKIRRALKEEKYAARRAILP+LQAEEDERFV E
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW
        WK YLEYEA+VMKDVPGWKVGENVYNSG+WMPPATGELRP+VW
Subjt:  WKSYLEYEAEVMKDVPGWKVGENVYNSGKWMPPATGELRPEVW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGAGGCCGCGATTCGGAAGAAGCCTGGCATGGCCAGCGTCAAAGACATGCCGATCCTCCAGGACGGGCCACCGCCGGGTGGATTCGCTCCGGTTCGCTATGCTCG
CCGGATTCCCACCAAAGGCCCTAGCGCTATGGCGATTTTCCTTACTGCATTTGGTGCGTTTTCTTGGGGGATGTATCAGGTCGGCAAGGGCAACAAGATCCGAAGGGCAC
TGAAGGAAGAGAAATATGCAGCCCGACGAGCAATATTGCCCGTGCTTCAAGCTGAGGAAGATGAAAGATTCGTCAAAGAGTGGAAGAGTTACCTTGAATATGAGGCTGAA
GTTATGAAGGATGTGCCTGGTTGGAAAGTTGGTGAAAATGTCTACAACTCTGGAAAATGGATGCCTCCAGCGACCGGTGAGCTACGACCCGAAGTCTGGTGA
mRNA sequenceShow/hide mRNA sequence
CCCATTACTTCGTCTCTTTCGGGTTCTTTCGTTCTCGAAACCTCCCATACCCCAAATCTCAGGTTCTCCATTACAGCCAGCTCTTGATTCGTTCACTTGATCGTCGAAGC
AGCTCTCTGAGATGACGGAGGCCGCGATTCGGAAGAAGCCTGGCATGGCCAGCGTCAAAGACATGCCGATCCTCCAGGACGGGCCACCGCCGGGTGGATTCGCTCCGGTT
CGCTATGCTCGCCGGATTCCCACCAAAGGCCCTAGCGCTATGGCGATTTTCCTTACTGCATTTGGTGCGTTTTCTTGGGGGATGTATCAGGTCGGCAAGGGCAACAAGAT
CCGAAGGGCACTGAAGGAAGAGAAATATGCAGCCCGACGAGCAATATTGCCCGTGCTTCAAGCTGAGGAAGATGAAAGATTCGTCAAAGAGTGGAAGAGTTACCTTGAAT
ATGAGGCTGAAGTTATGAAGGATGTGCCTGGTTGGAAAGTTGGTGAAAATGTCTACAACTCTGGAAAATGGATGCCTCCAGCGACCGGTGAGCTACGACCCGAAGTCTGG
TGATTTTGTTTCGAACACAGACTTCTTTGAGGTTGGCATGTAGTTTGTTTGTGTATGCGGTGCGACTTATATCCTCATATGGGTTTATTTCCTGATTTGCTGGTTCTTCA
TGGCCCTTCTCATGAAAATAAAAGAAGCATGTCAAAATTTCTTCAAATGTTTTGCAAAAACTGTCTTCTTTATTCAGTAAACATCTCCTTTTACCCATGTATCTCACTGA
ATGTTGGGACTTGGAATTAGACATCAATTTATCTTCATTCTTCTTATTTATTTCTTGTATGCCAAGCCGAACAGCATGCTTACCCTAGTCGGTGCCGACTTTGGTTCGGT
CGATACTCGTCGTAAGTTGAGGCTTTTGAGCTACGATGTGCTAAGAAGGAACTTGAAATTGGCGTGTGTAAGTTGATAGAACCCTGGAGGACTTGTAGTGTGTGAGACTT
GCGTGATAACCAAATACACCACTCAGATCACGTTATATTTATGGGAATGTTAAATTATAACTATAGTCATCTAATTTTGAAATTAAATTTGTGTAACAAAACAAATGAAA
AATATTAATAAATATCAAATAAAACCTCAAAAAAATTGTATAAAACTAACCAAGAAACCAAC
Protein sequenceShow/hide protein sequence
MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAE
VMKDVPGWKVGENVYNSGKWMPPATGELRPEVW