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Carg10148 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10148
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr17:493035..496101
RNA-Seq ExpressionCarg10148
SyntenyCarg10148
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574853.1 High mobility group B protein 15, partial [Cucurbita argyrosperma subsp. sororia]2.2e-1987.88Show/hide
Query:  DFDLFLKRLAAAMASIGEKSERIQSRGKRDAKQENSGEEKRQLNHIMSDVKLRKIHGNAVEEREER
        D D     LAAAMASIGEKSERIQ+RGKRDAKQENSGEEKRQ NHIMSDVKLRKIHGNAVEEREER
Subjt:  DFDLFLKRLAAAMASIGEKSERIQSRGKRDAKQENSGEEKRQLNHIMSDVKLRKIHGNAVEEREER
KAG7013426.1 hypothetical protein SDJN02_23592, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-51100Show/hide
Query:  MKINNKVSDRDCDFDLFLKRLAAAMASIGEKSERIQSRGKRDAKQENSGEEKRQLNHIMSDVKLRKIHGNAVEEREERLDFRNSPRDLWLNETPNRVMDV
        MKINNKVSDRDCDFDLFLKRLAAAMASIGEKSERIQSRGKRDAKQENSGEEKRQLNHIMSDVKLRKIHGNAVEEREERLDFRNSPRDLWLNETPNRVMDV
Subjt:  MKINNKVSDRDCDFDLFLKRLAAAMASIGEKSERIQSRGKRDAKQENSGEEKRQLNHIMSDVKLRKIHGNAVEEREERLDFRNSPRDLWLNETPNRVMDV

Query:  LEQFIDRL
        LEQFIDRL
Subjt:  LEQFIDRL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATAAACAATAAAGTTAGTGATAGAGATTGCGATTTCGACCTGTTTTTGAAGCGTCTTGCTGCTGCAATGGCTTCCATCGGAGAGAAGAGTGAAAGGATCCAAAG
TAGAGGAAAACGAGATGCAAAACAAGAGAATTCCGGGGAAGAAAAGAGACAACTAAATCACATAATGTCCGACGTAAAGCTTAGGAAAATCCATGGAAATGCGGTGGAAG
AACGAGAAGAACGGTTGGATTTTAGGAATTCGCCTCGTGATCTCTGGCTGAACGAAACTCCAAACAGAGTGATGGATGTGCTTGAACAGTTCATCGATCGATTATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAATAAACAATAAAGTTAGTGATAGAGATTGCGATTTCGACCTGTTTTTGAAGCGTCTTGCTGCTGCAATGGCTTCCATCGGAGAGAAGAGTGAAAGGATCCAAAG
TAGAGGAAAACGAGATGCAAAACAAGAGAATTCCGGGGAAGAAAAGAGACAACTAAATCACATAATGTCCGACGTAAAGCTTAGGAAAATCCATGGAAATGCGGTGGAAG
AACGAGAAGAACGGTTGGATTTTAGGAATTCGCCTCGTGATCTCTGGCTGAACGAAACTCCAAACAGAGTGATGGATGTGCTTGAACAGTTCATCGATCGATTATAG
Protein sequenceShow/hide protein sequence
MKINNKVSDRDCDFDLFLKRLAAAMASIGEKSERIQSRGKRDAKQENSGEEKRQLNHIMSDVKLRKIHGNAVEEREERLDFRNSPRDLWLNETPNRVMDVLEQFIDRL