CuGenDBv2

Gene ID	Carg10172
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ferredoxin-like protein
Genome location	Carg_Chr17:328927..330153
RNA-Seq Expression	Carg10172
Synteny	Carg10172
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR035940 - CAP superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7013402.1 hypothetical protein SDJN02_23568, partial [Cucurbita argyrosperma subsp. argyrosperma]

7.7e-131

100

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Query:  MRNLCFVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTF
        MRNLCFVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTF
Subjt:  MRNLCFVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTF

Query:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG
        DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG
Subjt:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG

Query:  AFWNITLFFLIIYCKICSSFSYRSIEILF
        AFWNITLFFLIIYCKICSSFSYRSIEILF
Subjt:  AFWNITLFFLIIYCKICSSFSYRSIEILF

XP_022958984.1 uncharacterized protein LOC111460112 [Cucurbita moschata]

2.5e-121

94.4

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Query:  MRNLCFVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTF
        MRNLC VECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNN VNCNPSSDNFTEVFAPDCGVELPTF
Subjt:  MRNLCFVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTF

Query:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG
        DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG
Subjt:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG

Query:  AFW---NITLFFLIIYCKICSSFSYRSIEILF
        AFW   + TLFFLIIY    S FSYRS+EILF
Subjt:  AFW---NITLFFLIIYCKICSSFSYRSIEILF

XP_023006308.1 uncharacterized protein LOC111499082 [Cucurbita maxima]

1.9e-121

95.11

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Query:  MRNLCFVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTF
        MRNLC VECFLLCSSLFAVLV+SK+HGNPANDLVDIINKNRTAAKLSRLSD+AGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTF
Subjt:  MRNLCFVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTF

Query:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG
        DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRN+SHTEVGVGMVGV+KGPFFWCVLFSNGKTNS+FVLENHGLGIKQKRGCFSGSSVECSRGHSNG
Subjt:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG

Query:  AFWN---ITLFFLIIYCKICSSFSY
        AFWN    TLFFLIIYCKICSSFSY
Subjt:  AFWN---ITLFFLIIYCKICSSFSY

XP_023549079.1 uncharacterized protein LOC111807547 [Cucurbita pepo subsp. pepo]

1.7e-125

96.12

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Query:  MRNLCFVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTF
        MRNLC VECFLLCS LFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNC+SNNTVNCNPSSDNFTEVFAPDCGVELPTF
Subjt:  MRNLCFVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTF

Query:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG
        DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGS VECSRGHSNG
Subjt:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG

Query:  AFWN---ITLFFLIIYCKICSSFSYRSIEILF
        A WN    TLFFLIIYCKICSSFSYRSIEILF
Subjt:  AFWN---ITLFFLIIYCKICSSFSYRSIEILF

XP_038875229.1 uncharacterized protein LOC120067738 [Benincasa hispida]

6.5e-114

89.78

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Query:  MRNLCFVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTF
        MR LC  ECF+LCS LFAVLVSSK+HGNPANDLVDIIN+NRTAAKLS LSD+AGLGCMALQF+NFCKGNCTSNNTVNCNPSSDNFTE+FAPDCGVELPTF
Subjt:  MRNLCFVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTF

Query:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG
        DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFS+GKTNSTFVLENHGLGIKQKRGCFSGSSVEC+RGHSNG
Subjt:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG

Query:  AFWN---ITLFFLIIYCKICSSFSY
        AFWN   + LFF II CKI S+FS+
Subjt:  AFWN---ITLFFLIIYCKICSSFSY

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CB60 uncharacterized protein LOC103498980

3.4e-108

90.48

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Query:  MRNLCFVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTF
        MR LC  ECF+LCS LFAVLVSSK+HGNPANDLVDIIN+NRTAAKLS LSD+AGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTE+FAPDCGVELPTF
Subjt:  MRNLCFVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTF

Query:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG
        DTITGQIVACQ  YLEPTEAFSRALVPDKKTLSLL+NKSHTEVGVG+VGVHKGPFFWCVLFS+GKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHS+G
Subjt:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG

Query:  AFWNITLFFL
        AFWN   F L
Subjt:  AFWNITLFFL

A0A6J1H6P2 uncharacterized protein LOC111460112

1.2e-121

94.4

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Query:  MRNLCFVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTF
        MRNLC VECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNN VNCNPSSDNFTEVFAPDCGVELPTF
Subjt:  MRNLCFVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTF

Query:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG
        DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG
Subjt:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG

Query:  AFW---NITLFFLIIYCKICSSFSYRSIEILF
        AFW   + TLFFLIIY    S FSYRS+EILF
Subjt:  AFW---NITLFFLIIYCKICSSFSYRSIEILF

A0A6J1HIR8 uncharacterized protein LOC111464418 isoform X1

4.9e-107

86.43

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Query:  MRNLCFVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTF
        M+ LC + CF  CS L AVLVSSKYHGNPANDLVDIIN+NRTAAKLSRLSD+AGLGC+ALQF NFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTF
Subjt:  MRNLCFVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTF

Query:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG
        DTIT  IVACQP YLEPTEAFSRAL+PDKKTLSLL NKSHTEVGVGMVGVHKGPF WCVLFS+GKTNSTFVLENHGLGIKQKRGCFSGSSVECSR HSNG
Subjt:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG

Query:  AFWN---ITLFFLIIYCKICS
        AFWN   I + F II  KICS
Subjt:  AFWN---ITLFFLIIYCKICS

A0A6J1KL52 uncharacterized protein LOC111494268 isoform X3

1.9e-106

85.33

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Query:  MRNLCFVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTF
        M+ LC + CF  CS L AVLVSSKYHGNPANDLVDIIN+NRTAAKLSRLS++AGLGCMALQF NFCKGNCT+NNTVNCNPSSDNFTEVFAPDCGVELPTF
Subjt:  MRNLCFVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTF

Query:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG
        DTITG IVACQP YLEPTEAFSRAL+PDKK LSLL NKSHTEVGVGMVGVHKGPF WCVLFS+GKTNSTFVLENHGLGIKQKRGCFSGSSVECSR HSNG
Subjt:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG

Query:  AFWN---ITLFFLIIYCKICSSFSY
        AFWN   I + F II  KIC SFS+
Subjt:  AFWN---ITLFFLIIYCKICSSFSY

A0A6J1L4J5 uncharacterized protein LOC111499082

9.2e-122

95.11

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Query:  MRNLCFVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTF
        MRNLC VECFLLCSSLFAVLV+SK+HGNPANDLVDIINKNRTAAKLSRLSD+AGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTF
Subjt:  MRNLCFVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTF

Query:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG
        DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRN+SHTEVGVGMVGV+KGPFFWCVLFSNGKTNS+FVLENHGLGIKQKRGCFSGSSVECSRGHSNG
Subjt:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG

Query:  AFWN---ITLFFLIIYCKICSSFSY
        AFWN    TLFFLIIYCKICSSFSY
Subjt:  AFWN---ITLFFLIIYCKICSSFSY

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G02180.1 ferredoxin-related

2.5e-63

52.75

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Query:  MRN-LCFVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPT
        M+N +  +E  LL  SL +VL SSK HGN A+++V I+N+NRTA KL +L+++ GLGCMALQ++  C+GNC  NNT++C    D+FT+VFAP+CGVELPT
Subjt:  MRN-LCFVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPT

Query:  FDTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSN
        F TITG I+ C   Y  P  AFS  L  D   LS+LRN+SHTEVGVGM  +HKG FFWC+LFS+G  NS+FVLE++G GIKQ+ GC+SGS+  CS     
Subjt:  FDTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSN

Query:  GAFWNITLFFLIIYCKIC
             +  F  +++   C
Subjt:  GAFWNITLFFLIIYCKIC

Sequences

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CDS sequence

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ATGAGGAACCTCTGTTTCGTTGAATGCTTCCTTCTCTGTTCTTCCCTGTTCGCTGTTCTTGTTTCCTCCAAGTATCACGGAAACCCAGCAAATGATCTTGTTGATATCAT
CAACAAAAACCGAACAGCTGCGAAGCTCTCTCGCCTGAGTGACAATGCAGGTCTCGGGTGCATGGCGTTGCAATTCATCAACTTCTGCAAAGGAAACTGCACTAGCAACA
ACACTGTAAATTGCAATCCATCCTCCGACAACTTCACAGAAGTTTTCGCTCCAGATTGTGGTGTCGAGCTCCCAACTTTCGACACGATAACCGGCCAAATTGTGGCTTGT
CAACCTGGATATCTTGAGCCAACAGAGGCGTTCTCTCGAGCACTCGTTCCTGACAAGAAAACTCTTTCCCTGTTGAGGAACAAATCTCATACAGAGGTTGGTGTGGGGAT
GGTTGGGGTACATAAAGGGCCATTCTTCTGGTGTGTTTTGTTCAGTAATGGGAAGACAAACTCAACATTTGTTCTTGAAAATCATGGTTTGGGTATCAAGCAAAAGAGAG
GATGCTTCAGTGGAAGTAGTGTTGAATGCAGTAGAGGTCACTCCAATGGAGCTTTTTGGAACATTACTCTGTTCTTTCTTATAATTTATTGTAAGATTTGTTCTTCTTTT
TCCTATAGATCAATAGAAATTTTGTTCTAA

mRNA sequence

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Protein sequence

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MRNLCFVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGQIVAC
QPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNGAFWNITLFFLIIYCKICSSF
SYRSIEILF

Carg10172 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome