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Carg10191 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10191
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTubulin-specific chaperone D
Genome locationCarg_Chr17:197292..199237
RNA-Seq ExpressionCarg10191
SyntenyCarg10191
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574802.1 hypothetical protein SDJN03_25441, partial [Cucurbita argyrosperma subsp. sororia]1.3e-09100Show/hide
Query:  MREILRQLAPRLLTVACYDREDKGLRELAADVLSAP
        MREILRQLAPRLLTVACYDREDKGLRELAADVLSAP
Subjt:  MREILRQLAPRLLTVACYDREDKGLRELAADVLSAP
KAG7013384.1 hypothetical protein SDJN02_23549, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-62100Show/hide
Query:  MDRVSSRDVYWPPCFLSEAGGQDGYGGGPNGIYAAGEGGSALHYDIRRGPPSVGSNEHMREILRQLAPRLLTVACYDREDKGLRELAADVLSAPVKCNGS
        MDRVSSRDVYWPPCFLSEAGGQDGYGGGPNGIYAAGEGGSALHYDIRRGPPSVGSNEHMREILRQLAPRLLTVACYDREDKGLRELAADVLSAPVKCNGS
Subjt:  MDRVSSRDVYWPPCFLSEAGGQDGYGGGPNGIYAAGEGGSALHYDIRRGPPSVGSNEHMREILRQLAPRLLTVACYDREDKGLRELAADVLSAPVKCNGS

Query:  SPPLADIVLFGLPIFPSVG
        SPPLADIVLFGLPIFPSVG
Subjt:  SPPLADIVLFGLPIFPSVG
XP_022155729.1 tubulin-folding cofactor D [Momordica charantia]6.2e-0748.84Show/hide
Query:  ALHYDIRRGPPSVGS------------------NEHMREILRQLAPRLLTVACYDREDKGLRELAADVLSAPVKCNGSSPPLADIV
        ALHYD+RRGP SVGS                  +  MREIL+QLAP LLTVACYDRE    R  AA      V   GS P   DIV
Subjt:  ALHYDIRRGPPSVGS------------------NEHMREILRQLAPRLLTVACYDREDKGLRELAADVLSAPVKCNGSSPPLADIV
XP_023549163.1 uncharacterized protein LOC111807603 [Cucurbita pepo subsp. pepo]6.4e-2089.83Show/hide
Query:  MREILRQLAPRLLTVACYDREDKGLRELAADVLSAPVKCNGSSPPLADIVLFGLPIFPS
        MREIL+QLAPRLLTVACYDREDKGLREL ADVLSA VKCN SSPPL DIVLFGLP FPS
Subjt:  MREILRQLAPRLLTVACYDREDKGLRELAADVLSAPVKCNGSSPPLADIVLFGLPIFPS
XP_024925215.1 tubulin-folding cofactor D-like [Ziziphus jujuba]3.9e-0955.84Show/hide
Query:  ALHYDIRRGPPSVGS------------------NEHMREILRQLAPRLLTVACYDRE---DKGLRELAADVLSAPVK
        ALHYD+RRGP SVGS                  +  +R IL QLAP LLTV CYDRE   DKGLRELAA+ LSA VK
Subjt:  ALHYDIRRGPPSVGS------------------NEHMREILRQLAPRLLTVACYDRE---DKGLRELAADVLSAPVK
TrEMBL top hitse value%identityAlignment
A0A0A0K913 Tubulin-specific chaperone D5.1e-0748.84Show/hide
Query:  ALHYDIRRGPPSVGS------------------NEHMREILRQLAPRLLTVACYDREDKGLRELAADVLSAPVKCNGSSPPLADIV
        ALHYDIRRGP SVGS                  +  MREIL+QLAP LLTVACYDRE    R  AA      V   G+ P   DIV
Subjt:  ALHYDIRRGPPSVGS------------------NEHMREILRQLAPRLLTVACYDREDKGLRELAADVLSAPVKCNGSSPPLADIV
A0A5A7TFF8 Tubulin-specific chaperone D5.1e-0748.84Show/hide
Query:  ALHYDIRRGPPSVGS------------------NEHMREILRQLAPRLLTVACYDREDKGLRELAADVLSAPVKCNGSSPPLADIV
        ALHYDIRRGP SVGS                  +  MREIL+QLAP LLTVACYDRE    R  AA      V   G+ P   DIV
Subjt:  ALHYDIRRGPPSVGS------------------NEHMREILRQLAPRLLTVACYDREDKGLRELAADVLSAPVKCNGSSPPLADIV
A0A6J1DR52 Tubulin-specific chaperone D3.0e-0748.84Show/hide
Query:  ALHYDIRRGPPSVGS------------------NEHMREILRQLAPRLLTVACYDREDKGLRELAADVLSAPVKCNGSSPPLADIV
        ALHYD+RRGP SVGS                  +  MREIL+QLAP LLTVACYDRE    R  AA      V   GS P   DIV
Subjt:  ALHYDIRRGPPSVGS------------------NEHMREILRQLAPRLLTVACYDREDKGLRELAADVLSAPVKCNGSSPPLADIV
A0A6J1HHJ4 Tubulin-specific chaperone D5.1e-0748.84Show/hide
Query:  ALHYDIRRGPPSVGS------------------NEHMREILRQLAPRLLTVACYDREDKGLRELAADVLSAPVKCNGSSPPLADIV
        ALHYDIRRGP SVGS                  +  MREIL+QLAP LLTVACYDRE    R  AA      V   G+ P   DIV
Subjt:  ALHYDIRRGPPSVGS------------------NEHMREILRQLAPRLLTVACYDREDKGLRELAADVLSAPVKCNGSSPPLADIV
A0A6P6FUI2 tubulin-folding cofactor D-like1.9e-0955.84Show/hide
Query:  ALHYDIRRGPPSVGS------------------NEHMREILRQLAPRLLTVACYDRE---DKGLRELAADVLSAPVK
        ALHYD+RRGP SVGS                  +  +R IL QLAP LLTV CYDRE   DKGLRELAA+ LSA VK
Subjt:  ALHYDIRRGPPSVGS------------------NEHMREILRQLAPRLLTVACYDRE---DKGLRELAADVLSAPVK
SwissProt top hitse value%identityAlignment
Q8L5R3 Tubulin-folding cofactor D3.5e-0539.53Show/hide
Query:  ALHYDIRRGPPSVG------------------SNEHMREILRQLAPRLLTVACYDREDKGLRELAADVLSAPVKCNGSSPPLADIV
        ALHYD+RRGP SVG                  S++ M+ +L QLAP LL V  +DRE    R  AA      V   G+ P   DIV
Subjt:  ALHYDIRRGPPSVG------------------SNEHMREILRQLAPRLLTVACYDREDKGLRELAADVLSAPVKCNGSSPPLADIV
Arabidopsis top hitse value%identityAlignment
AT3G60740.1 ARM repeat superfamily protein2.5e-0639.53Show/hide
Query:  ALHYDIRRGPPSVG------------------SNEHMREILRQLAPRLLTVACYDREDKGLRELAADVLSAPVKCNGSSPPLADIV
        ALHYD+RRGP SVG                  S++ M+ +L QLAP LL V  +DRE    R  AA      V   G+ P   DIV
Subjt:  ALHYDIRRGPPSVG------------------SNEHMREILRQLAPRLLTVACYDREDKGLRELAADVLSAPVKCNGSSPPLADIV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGGGTTTCTAGTAGAGATGTGTACTGGCCTCCTTGTTTTCTCTCTGAAGCTGGTGGCCAAGATGGCTATGGTGGGGGTCCTAATGGTATTTATGCCGCTGGTGA
AGGTGGTTCTGCATTACATTATGATATTCGAAGAGGTCCACCTAGTGTTGGATCTAATGAACACATGAGAGAGATTTTGAGGCAACTTGCTCCACGTCTTCTCACAGTTG
CTTGTTATGATCGTGAGGATAAAGGCTTGAGAGAACTTGCTGCAGACGTCCTTTCAGCACCTGTAAAATGTAACGGCTCAAGTCCACCACTAGCTGATATTGTTCTTTTT
GGACTTCCGATCTTTCCCTCTGTTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGGGTTTCTAGTAGAGATGTGTACTGGCCTCCTTGTTTTCTCTCTGAAGCTGGTGGCCAAGATGGCTATGGTGGGGGTCCTAATGGTATTTATGCCGCTGGTGA
AGGTGGTTCTGCATTACATTATGATATTCGAAGAGGTCCACCTAGTGTTGGATCTAATGAACACATGAGAGAGATTTTGAGGCAACTTGCTCCACGTCTTCTCACAGTTG
CTTGTTATGATCGTGAGGATAAAGGCTTGAGAGAACTTGCTGCAGACGTCCTTTCAGCACCTGTAAAATGTAACGGCTCAAGTCCACCACTAGCTGATATTGTTCTTTTT
GGACTTCCGATCTTTCCCTCTGTTGGATGA
Protein sequenceShow/hide protein sequence
MDRVSSRDVYWPPCFLSEAGGQDGYGGGPNGIYAAGEGGSALHYDIRRGPPSVGSNEHMREILRQLAPRLLTVACYDREDKGLRELAADVLSAPVKCNGSSPPLADIVLF
GLPIFPSVG