; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg10218 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10218
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRibosomal RNA adenine dimethylase family protein
Genome locationCarg_Chr17:58242..58775
RNA-Seq ExpressionCarg10218
SyntenyCarg10218
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574778.1 hypothetical protein SDJN03_25417, partial [Cucurbita argyrosperma subsp. sororia]4.3e-89100Show/hide
Query:  MEGMAEGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPPPSINDNLLSSATSAAFNDSGNEPMQVGDDE
        MEGMAEGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPPPSINDNLLSSATSAAFNDSGNEPMQVGDDE
Subjt:  MEGMAEGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPPPSINDNLLSSATSAAFNDSGNEPMQVGDDE

Query:  DADAEQNSKGTIEMVEEKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA
        DADAEQNSKGTIEMVEEKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA
Subjt:  DADAEQNSKGTIEMVEEKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA

XP_008460165.1 PREDICTED: uncharacterized protein LOC103499058 [Cucumis melo]2.6e-7083.62Show/hide
Query:  MEGMAEGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPPPSINDNLLSSATSAAFNDSGNEPMQVGDDE
        ME MAEG A PSL DL+ SL+QA+FMAKQL STSNP HLLQIYNSLHQANLNLS+FLST H PQSLPLPPPSIN+  LSSATSAAF     +PMQVGDD+
Subjt:  MEGMAEGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPPPSINDNLLSSATSAAFNDSGNEPMQVGDDE

Query:  DADAEQNSKGTIEMVEEKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA
        DADA QNSKGTIEMVEEKMKDCFIKNKRVKR+LSPSAAAMAEERRVH  NRF+AT KGFDPHVERLRALDLISQFHA
Subjt:  DADAEQNSKGTIEMVEEKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA

XP_022156139.1 uncharacterized protein LOC111023095 [Momordica charantia]5.8e-7083.62Show/hide
Query:  MEGMAEGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPPPSINDNLLSSATSAAFNDSGNEPMQVGDDE
        ME MAEG A+PSLPDLVLSLEQASFMAKQL STSNP+HLLQIYNSLHQAN NLS+FLS   +PQSLPLP PS+N+N LSSATSAAFND GNEPMQVGDD 
Subjt:  MEGMAEGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPPPSINDNLLSSATSAAFNDSGNEPMQVGDDE

Query:  DADAEQNSKGTIEMVEEKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA
            EQNSKG+IEMVEEKMKDCFIKNKRVKR+LSPS AAMAEERR+HRD+RF AT+KGFDP VERLRALDLISQFHA
Subjt:  DADAEQNSKGTIEMVEEKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA

XP_023548054.1 uncharacterized protein LOC111806806 [Cucurbita pepo subsp. pepo]4.0e-8797.24Show/hide
Query:  MEGMAEGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPPPSINDNLLSSATSAAFNDSGNEPMQVGDDE
        MEGMAEGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLP+PPPSINDNLLSSATSAAFNDSGNEPMQVGDDE
Subjt:  MEGMAEGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPPPSINDNLLSSATSAAFNDSGNEPMQVGDDE

Query:  ----DADAEQNSKGTIEMVEEKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA
            DADAEQNSKGTIEMVEEKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA
Subjt:  ----DADAEQNSKGTIEMVEEKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA

XP_038876419.1 uncharacterized protein LOC120068853 [Benincasa hispida]1.5e-7386.44Show/hide
Query:  MEGMAEGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPPPSINDNLLSSATSAAFNDSGNEPMQVGDDE
        ME MAEG A PSL DL+LSLEQASFMAKQL S+SNP HLLQIYNSLHQANLNLS+FLS   + QSLPLP PSIN+N LSSATSAAFND GNEPMQVGDD+
Subjt:  MEGMAEGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPPPSINDNLLSSATSAAFNDSGNEPMQVGDDE

Query:  DADAEQNSKGTIEMVEEKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA
        DADAE +SKGTIEMVEEKMKDCFIKNKRVKR+LSPSAAAMAEERRVHRDNRF+AT KGFDPHVERLRALDLISQFHA
Subjt:  DADAEQNSKGTIEMVEEKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA

TrEMBL top hitse value%identityAlignment
A0A0A0KBH1 Uncharacterized protein1.4e-6981.77Show/hide
Query:  MEGMAEGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQS----LPLPPPSINDNLLSSATSAAFNDSGNEPMQV
        ME MA+G A PSL DL+LSL+QA+FMAKQL STSNP HLLQIYNSLHQANLNLS+FLST H PQS    LPLPPPSIN+  LSSATSAAF     +PMQV
Subjt:  MEGMAEGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQS----LPLPPPSINDNLLSSATSAAFNDSGNEPMQV

Query:  GDDEDADAEQNSKGTIEMVEEKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA
        GDD+DADA QNSKGTIEMVEEKMKDCFIKNKRVKR+LSPSAAAMAEERRVH  NRF+AT KGFDPHVERLRALDLISQFHA
Subjt:  GDDEDADAEQNSKGTIEMVEEKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA

A0A1S3CC06 uncharacterized protein LOC1034990581.3e-7083.62Show/hide
Query:  MEGMAEGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPPPSINDNLLSSATSAAFNDSGNEPMQVGDDE
        ME MAEG A PSL DL+ SL+QA+FMAKQL STSNP HLLQIYNSLHQANLNLS+FLST H PQSLPLPPPSIN+  LSSATSAAF     +PMQVGDD+
Subjt:  MEGMAEGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPPPSINDNLLSSATSAAFNDSGNEPMQVGDDE

Query:  DADAEQNSKGTIEMVEEKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA
        DADA QNSKGTIEMVEEKMKDCFIKNKRVKR+LSPSAAAMAEERRVH  NRF+AT KGFDPHVERLRALDLISQFHA
Subjt:  DADAEQNSKGTIEMVEEKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA

A0A5D3DLF5 Putative AP2-like ethylene-responsive transcription factor SNZ1.3e-7083.62Show/hide
Query:  MEGMAEGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPPPSINDNLLSSATSAAFNDSGNEPMQVGDDE
        ME MAEG A PSL DL+ SL+QA+FMAKQL STSNP HLLQIYNSLHQANLNLS+FLST H PQSLPLPPPSIN+  LSSATSAAF     +PMQVGDD+
Subjt:  MEGMAEGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPPPSINDNLLSSATSAAFNDSGNEPMQVGDDE

Query:  DADAEQNSKGTIEMVEEKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA
        DADA QNSKGTIEMVEEKMKDCFIKNKRVKR+LSPSAAAMAEERRVH  NRF+AT KGFDPHVERLRALDLISQFHA
Subjt:  DADAEQNSKGTIEMVEEKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA

A0A6J1DSG3 uncharacterized protein LOC1110230952.8e-7083.62Show/hide
Query:  MEGMAEGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPPPSINDNLLSSATSAAFNDSGNEPMQVGDDE
        ME MAEG A+PSLPDLVLSLEQASFMAKQL STSNP+HLLQIYNSLHQAN NLS+FLS   +PQSLPLP PS+N+N LSSATSAAFND GNEPMQVGDD 
Subjt:  MEGMAEGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPPPSINDNLLSSATSAAFNDSGNEPMQVGDDE

Query:  DADAEQNSKGTIEMVEEKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA
            EQNSKG+IEMVEEKMKDCFIKNKRVKR+LSPS AAMAEERR+HRD+RF AT+KGFDP VERLRALDLISQFHA
Subjt:  DADAEQNSKGTIEMVEEKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA

A0A7N2MFF3 Uncharacterized protein2.5e-4258.92Show/hide
Query:  MEGMAEGAAAPSLP--DLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPPPSI-------NDNLLSSATSAAFNDSGN
        MEGMAE AA P  P  +LVL+LEQA+ MAKQL +T++P HLLQIY SLHQA+ +LS FLS  H  Q  P P PS+       ++N +SS T  A  D   
Subjt:  MEGMAEGAAAPSLP--DLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPPPSI-------NDNLLSSATSAAFNDSGN

Query:  EPMQVGDDEDADAEQNSKGTIEMVEEKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFH
         PMQ+ DD+  D E NSKG IE VEEKM+DCFIKNKR KR LSPSAA MAEERR++ D+ F  + KGFDP+  RLRALDL+ QFH
Subjt:  EPMQVGDDEDADAEQNSKGTIEMVEEKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G01840.1 unknown protein5.9e-2042.05Show/hide
Query:  AAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPPPSINDNLLSSATSAAFNDSGNEPMQVGDDEDAD---A
        A+   + +L+ SLEQA+ MA+Q+ +T     LLQI +SL  A+  LS FL+      S+P                A  + S  EPMQ+G++E  +   A
Subjt:  AAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPPPSINDNLLSSATSAAFNDSGNEPMQVGDDEDAD---A

Query:  EQNSKGTIEMVEEKMKDCFIKNKRVKRKLSPSAAAM---AEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA
        E+     IE VEEKM++CFI+NKR+KR LSPS+A +   A E R  RD  F +     DPH  +LRALDLI QFHA
Subjt:  EQNSKGTIEMVEEKMKDCFIKNKRVKRKLSPSAAAM---AEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGCATGGCAGAAGGAGCAGCAGCACCTTCATTGCCCGACCTTGTACTCTCGCTCGAGCAAGCATCGTTCATGGCCAAGCAGCTTTCTTCTACCTCTAACCCAGC
CCATCTCCTCCAAATCTACAATTCTCTCCACCAGGCCAACCTCAACCTCTCCGTTTTCCTCTCTACACCTCACTACCCCCAATCTCTTCCTCTTCCTCCCCCTTCCATCA
ACGATAATCTCCTCTCCTCTGCAACCAGCGCCGCCTTCAACGACAGCGGCAACGAGCCGATGCAGGTCGGCGATGACGAAGATGCCGATGCCGAGCAGAATTCCAAGGGC
ACGATTGAAATGGTTGAGGAGAAGATGAAGGATTGTTTTATTAAGAACAAGCGGGTTAAACGAAAGCTATCGCCGTCGGCCGCGGCTATGGCGGAGGAAAGGCGAGTACA
TCGTGATAATCGGTTTAGTGCGACGGCGAAGGGTTTCGATCCTCATGTTGAGAGATTGCGGGCCTTGGACCTGATTTCCCAGTTTCATGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGCATGGCAGAAGGAGCAGCAGCACCTTCATTGCCCGACCTTGTACTCTCGCTCGAGCAAGCATCGTTCATGGCCAAGCAGCTTTCTTCTACCTCTAACCCAGC
CCATCTCCTCCAAATCTACAATTCTCTCCACCAGGCCAACCTCAACCTCTCCGTTTTCCTCTCTACACCTCACTACCCCCAATCTCTTCCTCTTCCTCCCCCTTCCATCA
ACGATAATCTCCTCTCCTCTGCAACCAGCGCCGCCTTCAACGACAGCGGCAACGAGCCGATGCAGGTCGGCGATGACGAAGATGCCGATGCCGAGCAGAATTCCAAGGGC
ACGATTGAAATGGTTGAGGAGAAGATGAAGGATTGTTTTATTAAGAACAAGCGGGTTAAACGAAAGCTATCGCCGTCGGCCGCGGCTATGGCGGAGGAAAGGCGAGTACA
TCGTGATAATCGGTTTAGTGCGACGGCGAAGGGTTTCGATCCTCATGTTGAGAGATTGCGGGCCTTGGACCTGATTTCCCAGTTTCATGCGTGA
Protein sequenceShow/hide protein sequence
MEGMAEGAAAPSLPDLVLSLEQASFMAKQLSSTSNPAHLLQIYNSLHQANLNLSVFLSTPHYPQSLPLPPPSINDNLLSSATSAAFNDSGNEPMQVGDDEDADAEQNSKG
TIEMVEEKMKDCFIKNKRVKRKLSPSAAAMAEERRVHRDNRFSATAKGFDPHVERLRALDLISQFHA