; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg10225 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10225
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUbiquitin-related modifier 1 homolog
Genome locationCarg_Chr17:35396..38192
RNA-Seq ExpressionCarg10225
SyntenyCarg10225
Gene Ontology termsGO:0002098 - tRNA wobble uridine modification (biological process)
GO:0032447 - protein urmylation (biological process)
GO:0034227 - tRNA thio-modification (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0031386 - protein tag (molecular function)
InterPro domainsIPR012675 - Beta-grasp domain superfamily
IPR015221 - Ubiquitin-related modifier 1
IPR016155 - Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040023.1 ubiquitin-related modifier 1-like protein 2 [Cucumis melo var. makuwa]8.9e-4377.39Show/hide
Query:  LNMTVILTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPL
        ++MT+ L FKCSGGLELLC+S KIH+V +DPENG G            +LIMKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT L
Subjt:  LNMTVILTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPL

Query:  EEKDVVVFISTLHGG
        EEKDVVVFISTLHGG
Subjt:  EEKDVVVFISTLHGG

KAG7013351.1 Ubiquitin-related modifier 1-like 1 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-60100Show/hide
Query:  MLNMTVILTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTP
        MLNMTVILTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTP
Subjt:  MLNMTVILTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTP

Query:  LEEKDVVVFISTLHGG
        LEEKDVVVFISTLHGG
Subjt:  LEEKDVVVFISTLHGG

KAG7026033.1 Ubiquitin-related modifier 1-like 2, partial [Cucurbita argyrosperma subsp. argyrosperma]7.3e-4580.17Show/hide
Query:  MLNMTVILTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTP
        M++MTVIL FKCSGGLELLCDS KIH+V ++PENGAG            +L+MKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT 
Subjt:  MLNMTVILTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTP

Query:  LEEKDVVVFISTLHGG
        LEEKDVVVFISTLHGG
Subjt:  LEEKDVVVFISTLHGG

XP_022145475.1 ubiquitin-related modifier 1 homolog 2 isoform X1 [Momordica charantia]5.6e-4579.13Show/hide
Query:  LNMTVILTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPL
        ++MT++L FKCSGGLELLC+S KIH+V +DPENGAG            +LIMKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPL
Subjt:  LNMTVILTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPL

Query:  EEKDVVVFISTLHGG
        EEKDVVVFISTLHGG
Subjt:  EEKDVVVFISTLHGG

XP_038876424.1 ubiquitin-related modifier 1 homolog 2 isoform X2 [Benincasa hispida]1.5e-4581.03Show/hide
Query:  MLNMTVILTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTP
        M++MTVILTFKCSGGLELLCDS KIH+V +DPENG G            +LIMKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT 
Subjt:  MLNMTVILTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTP

Query:  LEEKDVVVFISTLHGG
        LEEKDVVVFISTLHGG
Subjt:  LEEKDVVVFISTLHGG

TrEMBL top hitse value%identityAlignment
A0A0A0KCT7 Ubiquitin-related modifier 1 homolog1.5e-4378.26Show/hide
Query:  LNMTVILTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPL
        ++MT+IL FKCSGGLELLC+S KIH+V +DPENG G            + IMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT L
Subjt:  LNMTVILTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPL

Query:  EEKDVVVFISTLHGG
        EEKDVVVFISTLHGG
Subjt:  EEKDVVVFISTLHGG

A0A5D3DLM7 Ubiquitin-related modifier 1 homolog4.3e-4377.39Show/hide
Query:  LNMTVILTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPL
        ++MT+ L FKCSGGLELLC+S KIH+V +DPENG G            +LIMKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT L
Subjt:  LNMTVILTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPL

Query:  EEKDVVVFISTLHGG
        EEKDVVVFISTLHGG
Subjt:  EEKDVVVFISTLHGG

A0A6J1CUK8 Ubiquitin-related modifier 1 homolog2.7e-4579.13Show/hide
Query:  LNMTVILTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPL
        ++MT++L FKCSGGLELLC+S KIH+V +DPENGAG            +LIMKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPL
Subjt:  LNMTVILTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPL

Query:  EEKDVVVFISTLHGG
        EEKDVVVFISTLHGG
Subjt:  EEKDVVVFISTLHGG

A0A6J1H5M9 Ubiquitin-related modifier 1 homolog4.3e-4383.49Show/hide
Query:  LTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVV
        LT +  GGLELLCDS KIHDV VDPENGAGT            LIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVV
Subjt:  LTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVV

Query:  VFISTLHGG
        VFISTLHGG
Subjt:  VFISTLHGG

A0A6J1KZL7 Ubiquitin-related modifier 1 homolog4.3e-4383.49Show/hide
Query:  LTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVV
        LT +  GGLELLCDS KIHDV VDPENGAGT            LIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVV
Subjt:  LTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVV

Query:  VFISTLHGG
        VFISTLHGG
Subjt:  VFISTLHGG

SwissProt top hitse value%identityAlignment
A0MDQ1 Ubiquitin-related modifier 1 homolog 14.7e-3973.39Show/hide
Query:  LTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVV
        LT +  GGLELLCDSEKIH V VD  NGA          +     MK LLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT +E+KDVV
Subjt:  LTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVV

Query:  VFISTLHGG
        VFISTLHGG
Subjt:  VFISTLHGG

B3H7G2 Ubiquitin-related modifier 1 homolog 21.3e-3669.44Show/hide
Query:  TFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVV
        T +  GGLELLCDS KIH V ++               +   L MKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LE+KDV+V
Subjt:  TFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVV

Query:  FISTLHGG
        FISTLHGG
Subjt:  FISTLHGG

B6SXH2 Ubiquitin-related modifier 1 homolog3.1e-3062.16Show/hide
Query:  LTFKCSGGLELLCD-SEKIHDVRV-DPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKD
        LT +  GGLELL + S K+H V V  P++G G            ++ MK LLSWV+ NLIKERPEMF+K D+VRPGVLVL+NDCDWEL G LD  LEEKD
Subjt:  LTFKCSGGLELLCD-SEKIHDVRV-DPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKD

Query:  VVVFISTLHGG
        VVVFISTLHGG
Subjt:  VVVFISTLHGG

Q0D6M1 Ubiquitin-related modifier 1 homolog1.9e-3262.73Show/hide
Query:  LTFKCSGGLELLCD-SEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDV
        LT +  GGLELL + S K+H V + P +G G            +++MK LL+WV+SNLIKERPEMF+KGD+VRPGVLVL+NDCDWEL G LD  LEEKDV
Subjt:  LTFKCSGGLELLCD-SEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDV

Query:  VVFISTLHGG
        VVFISTLHGG
Subjt:  VVFISTLHGG

Q7GBC8 Ubiquitin-related modifier 1 homolog1.9e-3262.73Show/hide
Query:  LTFKCSGGLELLCD-SEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDV
        LT +  GGLELL + S K+H V + P +G G            +++MK LL+WV+SNLIKERPEMF+KGD+VRPGVLVL+NDCDWEL G LD  LEEKDV
Subjt:  LTFKCSGGLELLCD-SEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDV

Query:  VVFISTLHGG
        VVFISTLHGG
Subjt:  VVFISTLHGG

Arabidopsis top hitse value%identityAlignment
AT2G45695.1 Ubiquitin related modifier 13.4e-4073.39Show/hide
Query:  LTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVV
        LT +  GGLELLCDSEKIH V VD  NGA          +     MK LLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT +E+KDVV
Subjt:  LTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVV

Query:  VFISTLHGG
        VFISTLHGG
Subjt:  VFISTLHGG

AT3G61113.1 Ubiquitin related modifier 19.2e-3869.44Show/hide
Query:  TFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVV
        T +  GGLELLCDS KIH V ++               +   L MKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LE+KDV+V
Subjt:  TFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVV

Query:  FISTLHGG
        FISTLHGG
Subjt:  FISTLHGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAAACATGACAGTAATATTAACTTTTAAATGCAGTGGGGGATTGGAGTTACTATGTGACTCTGAGAAGATCCACGATGTCCGCGTTGATCCTGAAAATGGAGCGGG
AACGCAAAAGTCTAATGCTTTCTTTCAAAACGGTTCTCAGTTAATTATGAAAGATTTGCTCTCTTGGGTCCGAAGTAATCTGATCAAGGAGAGGCCAGAAATGTTTATGA
AAGGCGACACTGTAAGACCTGGTGTTCTGGTGCTTGTAAATGATTGTGATTGGGAGCTGAGTGGGCAGCTTGATACACCATTGGAAGAGAAAGACGTGGTGGTGTTCATA
TCCACCCTGCATGGAGGCTAA
mRNA sequenceShow/hide mRNA sequence
CTCTCTCTCTCTCTCAAATTTTACTTGGAAGGAAAATTTCCCAGTTTGTTTAGCTCTGATCCTGGAACACAGAGTTTCAATGCCTTCTGTTTCTGGGAAAGTTGGAAATT
AGAAGAAATATCTTATTCGATCGTGTTTTTATGTTTTTTCGCAGCTTATAAACTTGAATTTCTGTGTCGTTGTCTATCCATAAAAATCGATTGTTTTCTGAATTTGAGCA
AACTCTTGAGTTCGTGAATTCTGTGTATTAATGAGGTATCGTGATACTGATGTTGGGGAATATTTCTCTTGAGCTGGCTCAAGGGAAGAAAAGATCGACTATTGGATATA
ATTGTTAGTGTTTAGTTGTCAATAATTCAAAATCTGCACCTATTTCAGGATATTGGGACCAAAACTATAGTTTTGCTTGAATATCCAGTTGCTTCACTGCCTCCATATTG
TTTTCATTCTGGTTTTGTTCGTTTATTACCATTGTTTTTGAAGCATATGCCAGTTTGTAAATTACACTCCGTTGTTCTTTCGTTAGATTATATATACATTGGAACTCGAT
AACCTGTTCTTTATCATATTCAACTTTTATTTGTGTTCGGTGGAACTCTTTGGCTGGATTGTACCATTTATAATTGCATATGTTGTTTCAACAATTCATCAGTGTGTTGT
TTACAGTGCTTGCAGATTTTGACTCCATCAGTACCCTCTATATTTCCTCATCCCCACCAAAGCCAAAAAAGAAGGAAAATAAATAATGTGGCAGTATCTTGAATAGCCTT
TTTCTGCAATATTAGAAATTATCCTTCCATATGCTTCTAGGTTGCATTTTTATTGCGTCTTTTATGACTGTAAAAGGTGAAACGGAAAAGATATCGATGCAGTATGTCAT
TCTTTAGGCTTTATTTTTTCAGCTAGTGTTTATATGTTAAACATGACAGTAATATTAACTTTTAAATGCAGTGGGGGATTGGAGTTACTATGTGACTCTGAGAAGATCCA
CGATGTCCGCGTTGATCCTGAAAATGGAGCGGGAACGCAAAAGTCTAATGCTTTCTTTCAAAACGGTTCTCAGTTAATTATGAAAGATTTGCTCTCTTGGGTCCGAAGTA
ATCTGATCAAGGAGAGGCCAGAAATGTTTATGAAAGGCGACACTGTAAGACCTGGTGTTCTGGTGCTTGTAAATGATTGTGATTGGGAGCTGAGTGGGCAGCTTGATACA
CCATTGGAAGAGAAAGACGTGGTGGTGTTCATATCCACCCTGCATGGAGGCTAACTCAGTAAGGAATATGGCTTTTCCAGCTTGTAGCTACGTGATTGTTGTCTGAGATA
ATGTGGCATTTTAACCTTAAAAATACGTATTGTTTGTTATCCTAAACTATACAAAGAATAATCCTGATCAGAGTTTGCTCTGAGGCTTGTGAAATCATCTTGTTGGGGTG
GATGTTCATGTTCAATGACTGAATAAAGTAGAAGAAAGGCTATATTCATAGGCATTTCAATTCATGTTCATGTTCATGTTCTGTTGTATAAGAAGTTCGAAAAGGTATTT
TAAATATTTCTTTTCAACATGTCAGACACAGAAATATATTGAGACAACCATAGAAGTTTTCTTTAAGGTTGAAGCATTGAAGTAACGGTGACTGATTTTCAATACCAAAA
ATCTTGATGCGGAGTTCCATCTTTCGGAATGAAAATAAAAGTCAAAGTCGAAGAAACTGGAATAATGAATGAACAACTATATTGACCAGAAAATCGAAACAGTAAAAATA
GTCCCAAGTCCTAAGTTTACGCAGCAGCATTTGTTCTAATAAAACACTTTCGGTATTATAATTCTCCAAGAAGAAATTCTTTAAAAGAAAAAAAAATGTAATAAGGAAAA
ACAAAAGCAAAGATAATAGAGAGTTGGGAAAAAGAAAGGGTATTGTTTTTAGGCCTTTTGCTTCCCTTTTCTAATTCTATCAAGCTCAGCTTCAGCATCGTTCAACTGCT
GTTTCAACGTTGATATTTTCCTCTCCAAGTCTTCCACCGAGTCTCTGCTAGTCGCTGGTTCATATGGCCTCACAAACTTACCTGAAAAGTCCTTCAGAGCTTCAACCCCA
GTCACCTGCAATACAGTGCACAACAAGTTTGGAAATCAAAGCTCTTCCCAATCTTTTTCTTTTGCTTCTTTCTGTTTTCAAATCAAAGCTCTTGCTTGGCATCTTCAACT
TTGGTGTTTTATCCACTAAGTTACGTTCATACTAACTAAAAATAAGATTGATATAACAGAACACGATATGTATAAAAGAGTTAGCAACTTGTCTCAGACGGTACAACAAA
TCGGTACTCACTACTATAAGACTAGGATCGGGTGAATAGGCACCTATTGCCATTTCTACCTTCCTTCTCCTCTCAAGGTCTACCAAACTTCAATAATTATATAGGAGAGA
ATGATAAGTTTAAAAAACAAAATATAATTCAAGACTTGGAACAAAACCCAATGGCAGACATGAAGGAAAAAGCATTTATGGAGTAGATGATAAAAGAAAACAGAATGAAT
CTCGATATATTGAGACAAATATGTGCAGAGAAAGCAGTACCTCTTGAGGCAGTAATGGCAA
Protein sequenceShow/hide protein sequence
MLNMTVILTFKCSGGLELLCDSEKIHDVRVDPENGAGTQKSNAFFQNGSQLIMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFI
STLHGG