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Carg10227 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10227
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPeroxisomal membrane protein PEX16
Genome locationCarg_Chr17:30791..31351
RNA-Seq ExpressionCarg10227
SyntenyCarg10227
Gene Ontology termsGO:0007031 - peroxisome organization (biological process)
GO:0005778 - peroxisomal membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR013919 - Peroxisome membrane protein, Pex16


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013349.1 Peroxisome biogenesis protein 16, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-29100Show/hide
Query:  MFDLVQLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
        MFDLVQLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
Subjt:  MFDLVQLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
KAG7026034.1 Peroxisome biogenesis protein 16, partial [Cucurbita argyrosperma subsp. argyrosperma]9.1e-2789.86Show/hide
Query:  MFDLVQLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
        +FDLVQLRRRKM WAFY+MRDPFFER+TRRKLEGAEKVL+PVPFVGFLTAKIVEL++GAQTRYTYMSAS
Subjt:  MFDLVQLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
XP_022959429.1 peroxisome biogenesis protein 16-like isoform X1 [Cucurbita moschata]2.6e-2698.44Show/hide
Query:  QLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
        +LRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
Subjt:  QLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
XP_022999826.1 peroxisome biogenesis protein 16 isoform X1 [Cucurbita maxima]1.2e-2691.18Show/hide
Query:  FDLVQLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
        FDLVQLRRRKMLWAFY+MRDPFF R+TRRKLEGAEKVL+PVPFVGFLTAKIVEL++GAQTRYTYMSAS
Subjt:  FDLVQLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
XP_022999828.1 peroxisome biogenesis protein 16 isoform X3 [Cucurbita maxima]1.2e-2691.18Show/hide
Query:  FDLVQLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
        FDLVQLRRRKMLWAFY+MRDPFF R+TRRKLEGAEKVL+PVPFVGFLTAKIVEL++GAQTRYTYMSAS
Subjt:  FDLVQLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
TrEMBL top hitse value%identityAlignment
A0A5D3DLT0 Peroxisomal membrane protein PEX161.7e-2696.88Show/hide
Query:  QLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
        +LRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELI+GAQTRYTYMSAS
Subjt:  QLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
A0A6J1H4U6 Peroxisomal membrane protein PEX161.3e-2698.44Show/hide
Query:  QLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
        +LRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
Subjt:  QLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
A0A6J1H817 Peroxisomal membrane protein PEX161.3e-2698.44Show/hide
Query:  QLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
        +LRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
Subjt:  QLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
A0A6J1KE71 Peroxisomal membrane protein PEX165.7e-2791.18Show/hide
Query:  FDLVQLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
        FDLVQLRRRKMLWAFY+MRDPFF R+TRRKLEGAEKVL+PVPFVGFLTAKIVEL++GAQTRYTYMSAS
Subjt:  FDLVQLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
A0A6J1KKT7 Peroxisomal membrane protein PEX165.7e-2791.18Show/hide
Query:  FDLVQLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
        FDLVQLRRRKMLWAFY+MRDPFF R+TRRKLEGAEKVL+PVPFVGFLTAKIVEL++GAQTRYTYMSAS
Subjt:  FDLVQLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
SwissProt top hitse value%identityAlignment
Q8S8S1 Peroxisome biogenesis protein 163.2e-1967.19Show/hide
Query:  QLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
        +LRRRK++WA YLMRDPFF +YTR+KLE ++K LE +P +GFLT KIVEL+ GAQ+RYTY+S S
Subjt:  QLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
Arabidopsis top hitse value%identityAlignment
AT2G45690.1 shrunken seed protein (SSE1)2.3e-2067.19Show/hide
Query:  QLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS
        +LRRRK++WA YLMRDPFF +YTR+KLE ++K LE +P +GFLT KIVEL+ GAQ+RYTY+S S
Subjt:  QLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGACTTGGTTCAGCTGAGAAGACGGAAGATGCTTTGGGCATTTTACCTCATGAGAGACCCATTCTTCGAGAGATATACAAGGCGAAAACTTGAAGGGGCCGAAAA
AGTTTTAGAACCTGTACCTTTTGTCGGATTCCTCACAGCAAAAATTGTTGAGCTTATTATTGGAGCTCAGACAAGATATACTTACATGTCAGCGTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGACTTGGTTCAGCTGAGAAGACGGAAGATGCTTTGGGCATTTTACCTCATGAGAGACCCATTCTTCGAGAGATATACAAGGCGAAAACTTGAAGGGGCCGAAAA
AGTTTTAGAACCTGTACCTTTTGTCGGATTCCTCACAGCAAAAATTGTTGAGCTTATTATTGGAGCTCAGACAAGATATACTTACATGTCAGCGTCATGAGATGAGAGGG
AAATTGGAGTTTGAAGGGCCCAAGTCTTCCCTCCTGGTTTGTTGTTTCTACGCTTCATACAAATATTTGGTGACGTTTCTTTTTGCAATCAGCTATTCTGAATAATAATA
ATAAGAATAATAATAATAATAATAATAATAATAATAATAATAATAATA
Protein sequenceShow/hide protein sequence
MFDLVQLRRRKMLWAFYLMRDPFFERYTRRKLEGAEKVLEPVPFVGFLTAKIVELIIGAQTRYTYMSAS