CuGenDBv2

Gene ID	Carg10260
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Mitochondrial import inner membrane translocase subunit
Genome location	Carg_Chr10:130751..132272
RNA-Seq Expression	Carg10260
Synteny	Carg10260
Gene Ontology terms	GO:0015031 - protein transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0005758 - mitochondrial intermembrane space (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR004217 - Tim10-like IPR035427 - Tim10-like domain superfamily IPR039238 - Mitochondrial import inner membrane translocase subunit Tim8/13

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7023044.1 Mitochondrial import inner membrane translocase subunit TIM8, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.1e-63

100

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Query:  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQNRMKVHIILVASKDILHWPFHFGSN
        MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQNRMKVHIILVASKDILHWPFHFGSN
Subjt:  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQNRMKVHIILVASKDILHWPFHFGSN

Query:  LPQIPTISASNCYDNDRLEFDL
        LPQIPTISASNCYDNDRLEFDL
Subjt:  LPQIPTISASNCYDNDRLEFDL

XP_008464391.1 PREDICTED: mitochondrial import inner membrane translocase subunit TIM8 [Cucumis melo]

2.0e-32

97.37

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Query:  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQN
        MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCW KC+TGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQN
Subjt:  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQN

XP_011073110.1 mitochondrial import inner membrane translocase subunit TIM8 [Sesamum indicum]

2.1e-26

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Query:  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQ
        MD SSLNSPEL  F+N+EK++AMV EM+ KLTS CW KC+TGTPGSKFSSSESNCL+NCAQRYMDMS+IIMKRFQ
Subjt:  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQ

XP_022135207.1 mitochondrial import inner membrane translocase subunit TIM8 [Momordica charantia]

5.7e-32

96.05

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Query:  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQN
        MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCW KC+TG+PGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQN
Subjt:  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQN

XP_022872200.1 mitochondrial import inner membrane translocase subunit TIM8-like [Olea europaea var. sylvestris]

3.2e-27

81.58

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Query:  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQN
        MDSSSLNSPEL  FI++EK++AMV EM+AKLT+VCW KC+TGTPGSKFSSSES+CL+NCAQRYMDMS+IIMKRFQN
Subjt:  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LTY7 Mitochondrial import inner membrane translocase subunit

9.5e-33

97.37

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Query:  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQN
        MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCW KC+TGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQN
Subjt:  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQN

A0A1S3CLD0 Mitochondrial import inner membrane translocase subunit

9.5e-33

97.37

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Query:  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQN
        MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCW KC+TGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQN
Subjt:  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQN

A0A6J1C212 Mitochondrial import inner membrane translocase subunit

2.8e-32

96.05

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Query:  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQN
        MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCW KC+TG+PGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQN
Subjt:  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQN

A0A6J1E0G1 Mitochondrial import inner membrane translocase subunit

9.5e-33

97.37

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Query:  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQN
        MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCW KC+TGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQN
Subjt:  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQN

A0A6J1IHF0 Mitochondrial import inner membrane translocase subunit

9.5e-33

97.37

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Query:  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQN
        MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCW KC+TGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQN
Subjt:  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQN

SwissProt top hits

e value

%identity

Alignment

P0CR94 Mitochondrial import inner membrane translocase subunit TIM8

1.8e-09

39.39

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Query:  ELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQ
        EL +F+ +E+ +A +   + +LT+ CW  C+TG   SKFS SE+ CL NC  R++D S+ I+++ +
Subjt:  ELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQ

P0CR95 Mitochondrial import inner membrane translocase subunit TIM8

1.8e-09

39.39

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Query:  ELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQ
        EL +F+ +E+ +A +   + +LT+ CW  C+TG   SKFS SE+ CL NC  R++D S+ I+++ +
Subjt:  ELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQ

Q4IJW4 Mitochondrial import inner membrane translocase subunit TIM8

7.8e-08

40.62

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Query:  ELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGT-PGSKFSSSESNCLSNCAQRYMDMSIIIMK
        EL  F+  E+QR+ +      LT +CW+KCV GT    K   SE  CL+NC +R++D++ + MK
Subjt:  ELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGT-PGSKFSSSESNCLSNCAQRYMDMSIIIMK

Q9XGY4 Mitochondrial import inner membrane translocase subunit TIM8

7.0e-25

68.83

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Query:  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQNR
        MD S  N+PEL+ F+ +EK+RAMV EMV+K+TSVCW KC+T  PGSKFSSSES+CL++CAQRYMDMS+IIMKRF ++
Subjt:  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQNR

Q9Y1A3 Mitochondrial import inner membrane translocase subunit Tim8

1.6e-08

35.9

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Query:  DSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQNRMK
        ++ S N  EL  F+  EKQ+A V   + +   +CW KC+ G P +K   +   CLSNC  R++D S++I +RF   ++
Subjt:  DSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQNRMK

Arabidopsis top hits

e value

%identity

Alignment

AT1G61570.1 translocase of the inner mitochondrial membrane 13

1.5e-06

39.44

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Query:  SSSLNSPE-LMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMK
        S S  SPE +M  +  +  +A   E++  L + C+ KCVT  PGS    SES+C+S C +RYM+ + II +
Subjt:  SSSLNSPE-LMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMK

AT5G50810.1 translocase inner membrane subunit 8

5.0e-26

68.83

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Query:  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQNR
        MD S  N+PEL+ F+ +EK+RAMV EMV+K+TSVCW KC+T  PGSKFSSSES+CL++CAQRYMDMS+IIMKRF ++
Subjt:  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQNR

Sequences

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CDS sequence

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ATGGATTCCTCGTCTCTTAACTCCCCGGAGCTGATGAATTTTATCAATGAAGAGAAGCAAAGAGCTATGGTTGCCGAGATGGTGGCTAAGCTTACCAGTGTGTGTTGGAC
CAAGTGTGTCACTGGTACGCCAGGGAGTAAGTTCAGTTCTAGTGAATCCAACTGTCTATCAAACTGTGCCCAGCGCTATATGGATATGAGCATCATCATTATGAAGCGAT
TCCAAAACAGAATGAAAGTTCATATAATTTTGGTTGCCTCAAAAGACATCCTTCATTGGCCTTTCCACTTTGGTTCCAATCTACCTCAAATCCCCACTATATCAGCTTCC
AATTGCTATGATAATGACAGACTGGAATTTGATTTGTAG

mRNA sequence

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Protein sequence

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MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWTKCVTGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQNRMKVHIILVASKDILHWPFHFGSNLPQIPTISAS
NCYDNDRLEFDL

Carg10260 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome