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Carg10304 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10304
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCentromere protein X
Genome locationCarg_Chr10:325727..327929
RNA-Seq ExpressionCarg10304
SyntenyCarg10304
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0051382 - kinetochore assembly (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR018552 - Centromere protein X


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589406.1 Protein JINGUBANG, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3883.19Show/hide
Query:  SLSQSLVSLAMEESTFDPLSLFPLLSDNFFIFRFGARISSEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGI
        SLSQSLVSLAMEESTFDP  +  +    +      +R S EREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGI
Subjt:  SLSQSLVSLAMEESTFDPLSLFPLLSDNFFIFRFGARISSEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGI

Query:  SRIEATHLERILPQLLLDF
        SRIEATHLERILPQLLLDF
Subjt:  SRIEATHLERILPQLLLDF

KAG7023086.1 Protein MHF2-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-53100Show/hide
Query:  SLSQSLVSLAMEESTFDPLSLFPLLSDNFFIFRFGARISSEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGI
        SLSQSLVSLAMEESTFDPLSLFPLLSDNFFIFRFGARISSEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGI
Subjt:  SLSQSLVSLAMEESTFDPLSLFPLLSDNFFIFRFGARISSEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGI

Query:  SRIEATHLERILPQLLLDF
        SRIEATHLERILPQLLLDF
Subjt:  SRIEATHLERILPQLLLDF

XP_022921828.1 protein MHF2 homolog [Cucurbita moschata]4.5e-3481.65Show/hide
Query:  MEESTFDPLSLFPLLSDNFFIFRFGARISSEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLER
        MEESTFDP  +  +    +      +R S EREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLER
Subjt:  MEESTFDPLSLFPLLSDNFFIFRFGARISSEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLER

Query:  ILPQLLLDF
        ILPQLLLDF
Subjt:  ILPQLLLDF

XP_022987126.1 protein MHF2 homolog [Cucurbita maxima]1.7e-3380.73Show/hide
Query:  MEESTFDPLSLFPLLSDNFFIFRFGARISSEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLER
        MEESTFDP  +  +    +       R S EREKNESSDAMDCEVDAGTSKKSRPMSANANALKL+SKLLQIFVSEAVQRAATIAEAEGISRIEATHLER
Subjt:  MEESTFDPLSLFPLLSDNFFIFRFGARISSEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLER

Query:  ILPQLLLDF
        ILPQLLLDF
Subjt:  ILPQLLLDF

XP_023516676.1 protein MHF2 homolog [Cucurbita pepo subsp. pepo]1.3e-3380.73Show/hide
Query:  MEESTFDPLSLFPLLSDNFFIFRFGARISSEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLER
        MEESTFDP  +  +    +      +R S EREKNESSDAMDCEVDAGTSKKSRPMSANANALKL+SKLLQIFVSEAVQRAATIAEAEGISRIEATHLER
Subjt:  MEESTFDPLSLFPLLSDNFFIFRFGARISSEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLER

Query:  ILPQLLLDF
        ILPQLLLDF
Subjt:  ILPQLLLDF

TrEMBL top hitse value%identityAlignment
A0A0A0LU58 Uncharacterized protein3.4e-2770.54Show/hide
Query:  MEESTFDPLSLFPLLSDNFFIFRFGARISSEREKNESS-DAMDCEVD--AGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATH
        MEE+ F P  +  +    +      +R S EREKNE++ DAMDCEVD  AGTSKKSRPMSANANALKL+SKL+QIF+SEAVQRAATIAEAEGISRIE TH
Subjt:  MEESTFDPLSLFPLLSDNFFIFRFGARISSEREKNESS-DAMDCEVD--AGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATH

Query:  LERILPQLLLDF
        LER+LPQLLLDF
Subjt:  LERILPQLLLDF

A0A1S3CLK5 centromere protein X isoform X26.8e-2870.27Show/hide
Query:  MEESTFDPLSLFPLLSDNFFIFRFGARISSEREKNESSDAMDCEVD--AGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHL
        MEE+ F P  +  +    +      +R S EREKNE+ DAMDCEVD  AGTSKKSRPMSANANALKL+SKL+QIF+SEAVQRAATIAEAEGI RIE THL
Subjt:  MEESTFDPLSLFPLLSDNFFIFRFGARISSEREKNESSDAMDCEVD--AGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHL

Query:  ERILPQLLLDF
        ER+LPQLLLDF
Subjt:  ERILPQLLLDF

A0A6J1C4N9 protein MHF2 homolog2.3e-3176.15Show/hide
Query:  MEESTFDPLSLFPLLSDNFFIFRFGARISSEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLER
        MEES FD   +  +    +      +R S ERE+NESSDAMDCEV+AGTSKKSRPMSANANALKL+SKLLQIF+SEAVQRAATIAEAEGISRIEATHLER
Subjt:  MEESTFDPLSLFPLLSDNFFIFRFGARISSEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLER

Query:  ILPQLLLDF
        ILPQLLLDF
Subjt:  ILPQLLLDF

A0A6J1E4X1 protein MHF2 homolog2.2e-3481.65Show/hide
Query:  MEESTFDPLSLFPLLSDNFFIFRFGARISSEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLER
        MEESTFDP  +  +    +      +R S EREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLER
Subjt:  MEESTFDPLSLFPLLSDNFFIFRFGARISSEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLER

Query:  ILPQLLLDF
        ILPQLLLDF
Subjt:  ILPQLLLDF

A0A6J1JD93 protein MHF2 homolog8.3e-3480.73Show/hide
Query:  MEESTFDPLSLFPLLSDNFFIFRFGARISSEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLER
        MEESTFDP  +  +    +       R S EREKNESSDAMDCEVDAGTSKKSRPMSANANALKL+SKLLQIFVSEAVQRAATIAEAEGISRIEATHLER
Subjt:  MEESTFDPLSLFPLLSDNFFIFRFGARISSEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLER

Query:  ILPQLLLDF
        ILPQLLLDF
Subjt:  ILPQLLLDF

SwissProt top hitse value%identityAlignment
A8MT69 Centromere protein X3.9e-0443.1Show/hide
Query:  KSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        K      + +AL+L  +LL++FV EA  R    A+AE   R++   LE++LPQLLLDF
Subjt:  KSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

P0DJH7 Centromere protein X1.1e-0650.98Show/hide
Query:  NANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        N +AL L ++LL++FV EA  RAA  A+AE + +++  H+E++LPQLLLDF
Subjt:  NANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

Q2NKU0 Centromere protein X4.2e-0644.83Show/hide
Query:  KSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        K +    + +AL+L ++LL+IFV EA  R+   A+AEG++ ++   LE++LPQLLLDF
Subjt:  KSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

Q8C4X1 Centromere protein X3.9e-0447.06Show/hide
Query:  NANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        + +AL+L ++ L+IFV EA  R    A+AE +  +E   LE++LPQLLLDF
Subjt:  NANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

Q8L7N3 Protein MHF2 homolog1.6e-2169.05Show/hide
Query:  ARISSEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        AR   ERE++++ DA + EV  GT+KK+R  SANANALKL+ +LL+ FVSEAVQRAA IAEAEG+ +IEATHLERILPQLLLDF
Subjt:  ARISSEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

Arabidopsis top hitse value%identityAlignment
AT1G78790.1 unknown protein1.1e-2269.05Show/hide
Query:  ARISSEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        AR   ERE++++ DA + EV  GT+KK+R  SANANALKL+ +LL+ FVSEAVQRAA IAEAEG+ +IEATHLERILPQLLLDF
Subjt:  ARISSEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

AT1G78790.2 unknown protein2.1e-1353.57Show/hide
Query:  ARISSEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
        AR   ERE++++ DA + EV  GT+KK+R                    SEAVQRAA IAEAEG+ +IEATHLERILPQLLLDF
Subjt:  ARISSEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCGCTCTCGCAGTCGCTAGTCTCGCTCGCCATGGAAGAGAGCACATTCGATCCTTTATCTTTGTTTCCTCTTCTTTCTGATAATTTCTTCATTTTCCGTTTTGGTGCTCG
CATTTCTTCAGAGCGCGAGAAAAACGAGAGCTCGGATGCTATGGATTGTGAGGTTGACGCTGGAACATCAAAGAAGAGCAGGCCGATGTCAGCCAATGCTAATGCACTTA
AATTGACCTCTAAACTTCTACAAATCTTTGTGTCAGAGGCCGTACAGCGTGCTGCAACAATTGCTGAAGCAGAAGGTATTAGCAGAATTGAAGCCACTCATTTGGAGAGG
ATTCTTCCGCAGTTACTACTGGACTTTTGA
mRNA sequenceShow/hide mRNA sequence
TCGCTCTCGCAGTCGCTAGTCTCGCTCGCCATGGAAGAGAGCACATTCGATCCTTTATCTTTGTTTCCTCTTCTTTCTGATAATTTCTTCATTTTCCGTTTTGGTGCTCG
CATTTCTTCAGAGCGCGAGAAAAACGAGAGCTCGGATGCTATGGATTGTGAGGTTGACGCTGGAACATCAAAGAAGAGCAGGCCGATGTCAGCCAATGCTAATGCACTTA
AATTGACCTCTAAACTTCTACAAATCTTTGTGTCAGAGGCCGTACAGCGTGCTGCAACAATTGCTGAAGCAGAAGGTATTAGCAGAATTGAAGCCACTCATTTGGAGAGG
ATTCTTCCGCAGTTACTACTGGACTTTTGAGGTAGCATTCCGTTTCATACGTTTCAATGTTTTGCTCTTGAAGATTAAGTTCTTGATTTATGGAGTGATTATTGGGGCTG
TATCAGTCGTTAATGCCTAAGTTTGCTAATATGAGAGAGATCTCATAAATAGAATGGGATTGGGGGGTAGATATTGGTATATGTTTCAAGTAGTTTGTAATTGGGAGGGT
AGGAGAGAGTTTTCTCGTTTTGTAGTCTTCTTCTGATCCCAATACAAACGTCAATCTGGTTCATCAGTCCAATTCTAACTCGGTGCTCACACTCCATAGTCTATAGAAGT
AGGTTTCAGAATGCACAGCTGGTGTTGTGGATAAATTTCTCAATGAAAGAACTTCCTATCCATTAAAAATTCCTCTTGCTGGTTTGTTTGGTTTTTGTAAGAGATTCCTC
TAAGGTCGGCTAAGAGATGTCTTTTCCAGGAGGATCAAGCAGCCAATAAAAGAATTTGTATGAACAAGGTCTGTCTGATTCTTGTTCTTCCTCCACTATCAAATAATTTA
TCATGATTAGTAAGTAATTCTTGTGATCCTATTTTTCGTAAAGCCTGAATAAAAGATTGAAAAGCAGAAAAATATAAAGGAAAAAAATAAAATTCCTTGATCAAAATTGT
TGAGTCCCCGTCCAGAGATCTTTTGAGGGCAGAAAAGTAAAAGCCAACAGAACGTGAATGCTAGATATGGGTACTATGGTAATAGAAAATGATCATTAAAATGCAATCCA
GGGTTCGTATTGTTAGGATGCCGGTGGGTTCATGATACCTTATGAATGTTTAGTAACTAAAAATAATTACGTTCTATTCTTTGATACGTAATATTGAAGTACTGAGAAGG
ACAAGTGTCTTGGTTGCAATCTGGACTGTAGCAGTACACAGTGCTCCTCCTCCTGTTTCTGTGCGTCCTCTTAGGGTGTTCCTCATCTTTCTTAGACCTTGCTATTTTAT
TTTCAAAATTTACGTTTAGGTTTTGCCTTGGAATACGCAAGCAGATGATCAAAGTGCACAAATATATAAACATTTAGATA
Protein sequenceShow/hide protein sequence
SLSQSLVSLAMEESTFDPLSLFPLLSDNFFIFRFGARISSEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLER
ILPQLLLDF