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Carg10341 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10341
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSerine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B
Genome locationCarg_Chr10:520745..522754
RNA-Seq ExpressionCarg10341
SyntenyCarg10341
Gene Ontology termsGO:0050790 - regulation of catalytic activity (biological process)
GO:0000159 - protein phosphatase type 2A complex (cellular component)
GO:0019888 - protein phosphatase regulator activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057847.1 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like [Cucumis melo var. makuwa]2.5e-0470.59Show/hide
Query:  MTVCNDLFRAPLEWKFSPVFGERIAGEDIQDGEL
        MTV ND   APL+WKFS VFGER+AGEDIQD ++
Subjt:  MTVCNDLFRAPLEWKFSPVFGERIAGEDIQDGEL

KAG6589441.1 Protein MICRORCHIDIA 6, partial [Cucurbita argyrosperma subsp. sororia]4.1e-3997.85Show/hide
Query:  MSVSPCCSAACKRSNLLIALFFIRRSPDGMRANVNCSLQSHLAGLSLSSIALHAVRYASPIAESKRPAARIAACLKDRLSSLSFTTSSISSLR
        MSVSPCCSAACKRSNLLIALFFIRRSPDGMRANV+CSLQSHLAGLSLSSIALHAVRYASPIAESKRPAARIAAC KDRLSSLSFTTSSISSLR
Subjt:  MSVSPCCSAACKRSNLLIALFFIRRSPDGMRANVNCSLQSHLAGLSLSSIALHAVRYASPIAESKRPAARIAACLKDRLSSLSFTTSSISSLR

KAG7023122.1 hypothetical protein SDJN02_14147, partial [Cucurbita argyrosperma subsp. argyrosperma]9.3e-68100Show/hide
Query:  MTVCNDLFRAPLEWKFSPVFGERIAGEDIQDGELSTQMSVSPCCSAACKRSNLLIALFFIRRSPDGMRANVNCSLQSHLAGLSLSSIALHAVRYASPIAE
        MTVCNDLFRAPLEWKFSPVFGERIAGEDIQDGELSTQMSVSPCCSAACKRSNLLIALFFIRRSPDGMRANVNCSLQSHLAGLSLSSIALHAVRYASPIAE
Subjt:  MTVCNDLFRAPLEWKFSPVFGERIAGEDIQDGELSTQMSVSPCCSAACKRSNLLIALFFIRRSPDGMRANVNCSLQSHLAGLSLSSIALHAVRYASPIAE

Query:  SKRPAARIAACLKDRLSSLSFTTSSISSLRECQDQ
        SKRPAARIAACLKDRLSSLSFTTSSISSLRECQDQ
Subjt:  SKRPAARIAACLKDRLSSLSFTTSSISSLRECQDQ

XP_008464552.1 PREDICTED: serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like [Cucumis melo]2.5e-0470.59Show/hide
Query:  MTVCNDLFRAPLEWKFSPVFGERIAGEDIQDGEL
        MTV ND   APL+WKFS VFGER+AGEDIQD ++
Subjt:  MTVCNDLFRAPLEWKFSPVFGERIAGEDIQDGEL

XP_022135336.1 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like [Momordica charantia]3.3e-0473.53Show/hide
Query:  MTVCNDLFRAPLEWKFSPVFGERIAGEDIQDGEL
        MTV N  FRAPLEWKFS VFGER AGEDI D ++
Subjt:  MTVCNDLFRAPLEWKFSPVFGERIAGEDIQDGEL

TrEMBL top hitse value%identityAlignment
A0A0A0LNW2 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B7.8e-0467.65Show/hide
Query:  MTVCNDLFRAPLEWKFSPVFGERIAGEDIQDGEL
        MTV ND   AP +WKFS VFGER+AGEDIQD ++
Subjt:  MTVCNDLFRAPLEWKFSPVFGERIAGEDIQDGEL

A0A1S3CLQ9 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B1.2e-0470.59Show/hide
Query:  MTVCNDLFRAPLEWKFSPVFGERIAGEDIQDGEL
        MTV ND   APL+WKFS VFGER+AGEDIQD ++
Subjt:  MTVCNDLFRAPLEWKFSPVFGERIAGEDIQDGEL

A0A5D3BFF8 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B1.2e-0470.59Show/hide
Query:  MTVCNDLFRAPLEWKFSPVFGERIAGEDIQDGEL
        MTV ND   APL+WKFS VFGER+AGEDIQD ++
Subjt:  MTVCNDLFRAPLEWKFSPVFGERIAGEDIQDGEL

A0A6J1C0D5 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B1.6e-0473.53Show/hide
Query:  MTVCNDLFRAPLEWKFSPVFGERIAGEDIQDGEL
        MTV N  FRAPLEWKFS VFGER AGEDI D ++
Subjt:  MTVCNDLFRAPLEWKFSPVFGERIAGEDIQDGEL

A0A6J1EP45 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B7.8e-0470.59Show/hide
Query:  MTVCNDLFRAPLEWKFSPVFGERIAGEDIQDGEL
        MTV N L  A LEWKFS VFGER+AGEDIQD ++
Subjt:  MTVCNDLFRAPLEWKFSPVFGERIAGEDIQDGEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGTATGCAACGATTTGTTTCGCGCTCCTCTTGAATGGAAGTTTTCTCCAGTCTTTGGAGAACGAATTGCTGGAGAGGATATTCAGGATGGCGAGCTATCAACACA
GATGTCGGTTTCACCCTGCTGTTCCGCCGCTTGCAAGCGTTCAAACCTCTTGATCGCTCTCTTCTTCATCCGCCGGTCGCCGGACGGCATGCGTGCAAATGTCAACTGCT
CTCTCCAGTCGCATCTCGCCGGATTGTCTTTGAGTAGTATTGCGCTTCATGCCGTTCGTTATGCTTCTCCCATAGCAGAAAGCAAACGTCCAGCGGCTAGAATTGCCGCT
TGCCTTAAAGATAGGCTTTCTAGTCTTTCTTTCACGACAAGTTCAATTTCTTCATTAAGGGAATGTCAAGATCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGACTGTATGCAACGATTTGTTTCGCGCTCCTCTTGAATGGAAGTTTTCTCCAGTCTTTGGAGAACGAATTGCTGGAGAGGATATTCAGGATGGCGAGCTATCAACACA
GATGTCGGTTTCACCCTGCTGTTCCGCCGCTTGCAAGCGTTCAAACCTCTTGATCGCTCTCTTCTTCATCCGCCGGTCGCCGGACGGCATGCGTGCAAATGTCAACTGCT
CTCTCCAGTCGCATCTCGCCGGATTGTCTTTGAGTAGTATTGCGCTTCATGCCGTTCGTTATGCTTCTCCCATAGCAGAAAGCAAACGTCCAGCGGCTAGAATTGCCGCT
TGCCTTAAAGATAGGCTTTCTAGTCTTTCTTTCACGACAAGTTCAATTTCTTCATTAAGGGAATGTCAAGATCAATAG
Protein sequenceShow/hide protein sequence
MTVCNDLFRAPLEWKFSPVFGERIAGEDIQDGELSTQMSVSPCCSAACKRSNLLIALFFIRRSPDGMRANVNCSLQSHLAGLSLSSIALHAVRYASPIAESKRPAARIAA
CLKDRLSSLSFTTSSISSLRECQDQ