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Carg10360 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10360
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionBEST Arabidopsis thaliana protein match is: NHL domain-containing protein .
Genome locationCarg_Chr10:606794..607309
RNA-Seq ExpressionCarg10360
SyntenyCarg10360
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589457.1 hypothetical protein SDJN03_14880, partial [Cucurbita argyrosperma subsp. sororia]4.0e-9297.66Show/hide
Query:  MAYPDAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGG
        MAYPDAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRN    
Subjt:  MAYPDAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGG

Query:  GGGGATGRPGKFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA
        GGGGATGRPGKFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA
Subjt:  GGGGATGRPGKFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA

KAG7023141.1 hypothetical protein SDJN02_14166, partial [Cucurbita argyrosperma subsp. argyrosperma]6.0e-96100Show/hide
Query:  MAYPDAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGG
        MAYPDAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGG
Subjt:  MAYPDAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGG

Query:  GGGGATGRPGKFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA
        GGGGATGRPGKFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA
Subjt:  GGGGATGRPGKFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA

XP_022921694.1 uncharacterized protein LOC111429865 [Cucurbita moschata]2.3e-8793.57Show/hide
Query:  MAYPDAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGG
        MAYPDAEEPPPCE  NSNSLLPTTRCGCFRLSCLE RRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGG G
Subjt:  MAYPDAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGG

Query:  GGGGATGRPGKFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA
              GRPGKF YDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA
Subjt:  GGGGATGRPGKFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA

XP_022988416.1 uncharacterized protein LOC111485666 [Cucurbita maxima]2.6e-9196.49Show/hide
Query:  MAYPDAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGG
        MAYPDAEEPPP EA NSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIR SQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGG
Subjt:  MAYPDAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGG

Query:  GGGGATGRPGKFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA
        GGG A GRPGKF YDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA
Subjt:  GGGGATGRPGKFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA

XP_023516338.1 uncharacterized protein LOC111780229 [Cucurbita pepo subsp. pepo]4.9e-9094.74Show/hide
Query:  MAYPDAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGG
        MAYPDAEEPPPCEA +SNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNG GG
Subjt:  MAYPDAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGG

Query:  GGGGATGRPGKFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA
        GG  A GRPGKF YDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIP PLKTGG TGKDISTVA
Subjt:  GGGGATGRPGKFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA

TrEMBL top hitse value%identityAlignment
A0A1S3BVG0 uncharacterized protein LOC1034939213.7e-7584.62Show/hide
Query:  DAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNG--GGGGG
        D EE P CEA  SNSLLPT RCGCFRLSC  SRR   VGPSWWERIRASQVHSEGRWWARGV+VILK+REWSEIVAGPRWKTFIRRFNRNR+G  GGGGG
Subjt:  DAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNG--GGGGG

Query:  GGATGRPGKFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA
        GG+  R GKF YDPLSYAMNFDEGSRQIGELDDD DDFNGYRNFSARYASIPAPLKTGGT  KD+S VA
Subjt:  GGATGRPGKFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA

A0A5A7UWM1 Putative Serine/arginine repetitive matrix protein 26.3e-7583.63Show/hide
Query:  DAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRN----GGGG
        D EE P CEA  SNSLLPT RCGCFRLSC  SRR   VGPSWWERIRASQVHSEGRWWARGV+VILK+REWSEIVAGPRWKTFIRRFNRNR+    GGGG
Subjt:  DAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRN----GGGG

Query:  GGGGATGRPGKFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA
        GGGG+  R GKF YDPLSYAMNFDEGSRQIGELDDD DDFNGYRNFSARYASIPAPLKTGGT  KD+S VA
Subjt:  GGGGATGRPGKFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA

A0A5D3BK38 Putative Serine/arginine repetitive matrix protein 23.7e-7584.62Show/hide
Query:  DAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNG--GGGGG
        D EE P CEA  SNSLLPT RCGCFRLSC  SRR   VGPSWWERIRASQVHSEGRWWARGV+VILK+REWSEIVAGPRWKTFIRRFNRNR+G  GGGGG
Subjt:  DAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNG--GGGGG

Query:  GGATGRPGKFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA
        GG+  R GKF YDPLSYAMNFDEGSRQIGELDDD DDFNGYRNFSARYASIPAPLKTGGT  KD+S VA
Subjt:  GGATGRPGKFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA

A0A6J1E188 uncharacterized protein LOC1114298651.1e-8793.57Show/hide
Query:  MAYPDAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGG
        MAYPDAEEPPPCE  NSNSLLPTTRCGCFRLSCLE RRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGG G
Subjt:  MAYPDAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGG

Query:  GGGGATGRPGKFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA
              GRPGKF YDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA
Subjt:  GGGGATGRPGKFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA

A0A6J1JH52 uncharacterized protein LOC1114856661.3e-9196.49Show/hide
Query:  MAYPDAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGG
        MAYPDAEEPPP EA NSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIR SQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGG
Subjt:  MAYPDAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGG

Query:  GGGGATGRPGKFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA
        GGG A GRPGKF YDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA
Subjt:  GGGGATGRPGKFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01430.1 BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1)1.0e-2442.44Show/hide
Query:  EEPPPCEAANSNSL---LPTTRCGCFRLSCLESRRAVAVGPS-WWERI-RASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNR-NRNGGGG
        + PP  E   ++ +   L   R  CF + CL S +    G S WW+RI    ++  + RWW RG R   ++REWSE+VAGPRWKT+IRRF R N  GGGG
Subjt:  EEPPPCEAANSNSL---LPTTRCGCFRLSCLESRRAVAVGPS-WWERI-RASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNR-NRNGGGG

Query:  G---------GGGA----TGRPGKFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKT
        G         GGGA    +   GKF YD LSY++NFD+G+ Q G  DD+      YR++S R+A+   P+ T
Subjt:  G---------GGGA----TGRPGKFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKT

AT3G48020.1 unknown protein3.2e-2345.07Show/hide
Query:  EAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGGGGGGATGRPGKF
        E   +N LL  + C      C     +  V  SWW+RI  +  H E RWW   VR  LKIREWSEIVAGPRWKTFIRRFNR+   G            KF
Subjt:  EAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGGGGGGATGRPGKF

Query:  HYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIP
         YDP+SY ++F++  +     DDD     G R+FS RYAS+P
Subjt:  HYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIP

AT5G14890.1 NHL domain-containing protein1.6e-2245.59Show/hide
Query:  CFRLSCL-ESRRAVAVGPSWWERIR-ASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGGGGGGATGRPG--KFHYDPLSYAMNF
        CF L CL  S+ +   G  WW+RIR   ++  + RWW  G    +K+REWSEIVAGP+WKTFIRRF RN    GG  GG   RP    F YD  SY++NF
Subjt:  CFRLSCL-ESRRAVAVGPSWWERIR-ASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGGGGGGATGRPG--KFHYDPLSYAMNF

Query:  DEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKT
        D+G +Q G  +D+      YR++S R+A+   P+ T
Subjt:  DEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKT

AT5G25240.1 unknown protein3.0e-0535.62Show/hide
Query:  QVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGGGGGGATGRPGKFHYDPLSYAMNFDEG
        Q    G W   G   +  ++E SE +AGP+WK FIR F+  R            R   F YD  +Y++NFD+G
Subjt:  QVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGGGGGGATGRPGKFHYDPLSYAMNFDEG

AT5G62865.1 unknown protein1.1e-2349.29Show/hide
Query:  RCGCFRLSCLESRRAVAVGPSWWERIRA--SQVHS-----EGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGGGGGGATGRPGKFHYDPL
        RC CF  S   SR + AVG S W RIR      HS     E RWW   +R  LKIREWSEIVAGPRWKTFIRRFNR+   G            KF YDPL
Subjt:  RCGCFRLSCLESRRAVAVGPSWWERIRA--SQVHS-----EGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGGGGGGATGRPGKFHYDPL

Query:  SYAMNFDEGSRQIGELDDDNDDF---NGYRNFSARYASIP
        SY++NFD+        DD+ D++    G R+FS R+AS+P
Subjt:  SYAMNFDEGSRQIGELDDDNDDF---NGYRNFSARYASIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTATCCAGATGCAGAAGAGCCTCCTCCTTGCGAAGCGGCTAATTCCAATTCTTTGTTGCCGACCACCAGGTGCGGATGTTTCCGGTTATCGTGCTTGGAATCTCG
CCGTGCGGTAGCCGTCGGGCCATCGTGGTGGGAGAGGATTAGGGCGTCGCAGGTTCACAGCGAGGGGCGCTGGTGGGCGCGAGGCGTTAGGGTTATATTGAAGATCCGAG
AGTGGTCTGAGATAGTCGCTGGACCGAGATGGAAGACTTTCATTCGTCGATTTAACAGGAATCGGAACGGTGGTGGTGGTGGTGGTGGTGGTGCTACTGGTAGGCCTGGG
AAATTTCATTACGATCCCTTGAGTTACGCTATGAATTTTGATGAAGGTTCGAGGCAGATTGGGGAATTGGACGACGATAATGACGACTTCAATGGGTATCGGAACTTCTC
TGCTCGTTACGCTTCAATACCGGCGCCGTTGAAGACCGGAGGAACAACTGGGAAGGATATATCTACCGTCGCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTATCCAGATGCAGAAGAGCCTCCTCCTTGCGAAGCGGCTAATTCCAATTCTTTGTTGCCGACCACCAGGTGCGGATGTTTCCGGTTATCGTGCTTGGAATCTCG
CCGTGCGGTAGCCGTCGGGCCATCGTGGTGGGAGAGGATTAGGGCGTCGCAGGTTCACAGCGAGGGGCGCTGGTGGGCGCGAGGCGTTAGGGTTATATTGAAGATCCGAG
AGTGGTCTGAGATAGTCGCTGGACCGAGATGGAAGACTTTCATTCGTCGATTTAACAGGAATCGGAACGGTGGTGGTGGTGGTGGTGGTGGTGCTACTGGTAGGCCTGGG
AAATTTCATTACGATCCCTTGAGTTACGCTATGAATTTTGATGAAGGTTCGAGGCAGATTGGGGAATTGGACGACGATAATGACGACTTCAATGGGTATCGGAACTTCTC
TGCTCGTTACGCTTCAATACCGGCGCCGTTGAAGACCGGAGGAACAACTGGGAAGGATATATCTACCGTCGCGTAA
Protein sequenceShow/hide protein sequence
MAYPDAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGGGGGGATGRPG
KFHYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA