; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg10379 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10379
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRING-type domain-containing protein
Genome locationCarg_Chr10:694436..695886
RNA-Seq ExpressionCarg10379
SyntenyCarg10379
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR039515 - NOT4, modified RING finger, HC subclass (C4C4-type)
IPR039780 - CCR4-NOT transcription complex subunit 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589475.1 CCR4-NOT transcription complex subunit 4, partial [Cucurbita argyrosperma subsp. sororia]5.5e-19799.71Show/hide
Query:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC
        MVTDSIANASISLAP+ARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC
Subjt:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC

Query:  SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSRN
        SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSRN
Subjt:  SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSRN

Query:  ELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
        ELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
Subjt:  ELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC

Query:  HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS
        HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS
Subjt:  HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS

KAG7023160.1 CCR4-NOT transcription complex subunit 4 [Cucurbita argyrosperma subsp. argyrosperma]2.5e-197100Show/hide
Query:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC
        MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC
Subjt:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC

Query:  SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSRN
        SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSRN
Subjt:  SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSRN

Query:  ELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
        ELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
Subjt:  ELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC

Query:  HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS
        HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS
Subjt:  HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS

XP_022921889.1 uncharacterized protein LOC111430021 [Cucurbita moschata]2.3e-19598.85Show/hide
Query:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC
        MVTDSIANASISLAP+ARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC
Subjt:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC

Query:  SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSRN
        SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSC DSRN
Subjt:  SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSRN

Query:  ELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
        ELG+GDGDSSIEHGRI RRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
Subjt:  ELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC

Query:  HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS
        HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS
Subjt:  HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS

XP_022988378.1 uncharacterized protein LOC111485637 [Cucurbita maxima]5.9e-19196.26Show/hide
Query:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC
        MVTDSIANASISLAP+ARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKW++EDNRLDSEVVKTVEDD L SKKINRR+IGEEDDRSVHHHSDC
Subjt:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC

Query:  SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSRN
        SESPSNSPPS+GSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDE DDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSRN
Subjt:  SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSRN

Query:  ELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
        ELG+GDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCG +PWACGGV+PVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
Subjt:  ELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC

Query:  HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS
        HKRILEEDGRCPGCRKPYDRDPADNETNE+SGSPTFPLARSCSMISRS
Subjt:  HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS

XP_023516237.1 uncharacterized protein LOC111780152 [Cucurbita pepo subsp. pepo]1.8e-19297.13Show/hide
Query:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC
        MVTDSIANASISLAP+ARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWS+EDNRL+SEVVKTVEDDKL SKKINRR+IGEEDDRSVHHHSDC
Subjt:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC

Query:  SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSRN
        SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSC DSRN
Subjt:  SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSRN

Query:  ELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
        ELG+GDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+PVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
Subjt:  ELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC

Query:  HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS
        HKRILEEDGRCPGCRKPYDRDPADNETNE+SGSPTFPLARSCSMISRS
Subjt:  HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS

TrEMBL top hitse value%identityAlignment
A0A1S3BVJ1 uncharacterized protein LOC1034939475.2e-16986.53Show/hide
Query:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC
        MVTDSIANASISLAP+ARDLPL KK+R RNSKLKQSKLDVRREQWLSRGA+KNKKW++EDNRLDS V+KT +DD L S+KIN R+IGEE+DRSVHHHSD 
Subjt:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC

Query:  SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSIT-EEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSR
        S+SPSNSPPS+GSSILGGNDSG HFTGSSSSSSCRSSSSGCRSGSIT EEEE+EGDDDCL+DWEA AD L ATDKQ DQCSESSPRG+VVSQL SCGD R
Subjt:  SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSIT-EEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSR

Query:  NELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLF
        NELG+GDGDS++E GRI +RASMN RAWRPDDA RPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+PVPTSCPICFEDLDLTDS+FLPC CGFRLCLF
Subjt:  NELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS
        CHKRILEEDGRCPGCRKPYDRDPADNETN   GSPT PLARSCSMISRS
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS

A0A5A7UPV5 Suppressor protein SRP40 isoform X21.5e-16886.49Show/hide
Query:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC
        MVTDSIANASISLAP+ARDLPL KK+R RNSKLKQSKLDVRREQWLSRGA+KNKKW++EDNRLDS V+KT +DD L S+KIN R+IGEE+DRSVHHHSD 
Subjt:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC

Query:  SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSIT-EEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSR
        S+SPSNSPPS+GSSILGGNDSG HFTGSSSSSSCRSSSSGCRSGSIT EEEE+EGDDDCL+DWEA AD L ATDKQ DQCSESSPRG+VVSQL SCGD R
Subjt:  SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSIT-EEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSR

Query:  NELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLF
        NELG+GDGDS++E GRI +RASMN RAWRPDDA RPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+PVPTSCPICFEDLDLTDS+FLPC CGFRLCLF
Subjt:  NELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISR
        CHKRILEEDGRCPGCRKPYDRDPADNETN   GSPT PLARSCSMISR
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISR

A0A5D3BIS7 Suppressor protein SRP40 isoform X25.8e-16886.46Show/hide
Query:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC
        MVTDSIANASISLAP+ARDLPL KK+R RNSKLKQSKLDVRREQWLSRGA+KNKKW++EDNRLDS V+KT +DD L S+KIN R+IGEE+DRSVHHHSD 
Subjt:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC

Query:  SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSIT-EEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSR
        S+SPSNSPPS+GSSILGGNDSG HFTGSSSSSSCRSSSSGCRSGSIT EEEE+EGDDDCL+DWEA AD L ATDKQ DQCSESSPRG+VVSQL SCGD R
Subjt:  SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSIT-EEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSR

Query:  NELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLF
        NELG+GDGDS++E GRI +RASMN RAWRPDDA RPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+PVPTSCPICFEDLDLTDS+FLPC CGFRLCLF
Subjt:  NELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMIS
        CHKRILEEDGRCPGCRKPYDRDPADNETN   GSPT PLARSCSMIS
Subjt:  CHKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMIS

A0A6J1E1T5 uncharacterized protein LOC1114300211.1e-19598.85Show/hide
Query:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC
        MVTDSIANASISLAP+ARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC
Subjt:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC

Query:  SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSRN
        SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSC DSRN
Subjt:  SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSRN

Query:  ELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
        ELG+GDGDSSIEHGRI RRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
Subjt:  ELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC

Query:  HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS
        HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS
Subjt:  HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS

A0A6J1JM47 uncharacterized protein LOC1114856372.8e-19196.26Show/hide
Query:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC
        MVTDSIANASISLAP+ARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKW++EDNRLDSEVVKTVEDD L SKKINRR+IGEEDDRSVHHHSDC
Subjt:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC

Query:  SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSRN
        SESPSNSPPS+GSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDE DDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSRN
Subjt:  SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSRN

Query:  ELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
        ELG+GDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCG +PWACGGV+PVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
Subjt:  ELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC

Query:  HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS
        HKRILEEDGRCPGCRKPYDRDPADNETNE+SGSPTFPLARSCSMISRS
Subjt:  HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS

SwissProt top hitse value%identityAlignment
O95628 CCR4-NOT transcription complex subunit 41.6e-1354.55Show/hide
Query:  PTSCPICFEDLDLTDSNFLPCPCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA
        P  CP+C E L++ D NF PC CG+++C FC  RI  +E+G CP CRKPY  DPA
Subjt:  PTSCPICFEDLDLTDSNFLPCPCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA

P34909 General negative regulator of transcription subunit 43.0e-1254Show/hide
Query:  CPICFEDLDLTDSNFLPCPCGFRLCLFCHKRIL---EEDGRCPGCRKPYD
        CP+C E +D+TD NF PCPCG+++C FC+  I    E +GRCP CR+ YD
Subjt:  CPICFEDLDLTDSNFLPCPCGFRLCLFCHKRIL---EEDGRCPGCRKPYD

Q09818 Putative general negative regulator of transcription C16C9.04c1.3e-1050Show/hide
Query:  CPICFEDLDLTDSNFLPCPCGFRLCLFCHKRILEE-DGRCPGCRKPYDRD
        CP+C E++D++D NF PC CG+R+C FC   I E+ +GRCP CR+ Y  +
Subjt:  CPICFEDLDLTDSNFLPCPCGFRLCLFCHKRILEE-DGRCPGCRKPYDRD

Q8BT14 CCR4-NOT transcription complex subunit 41.6e-1354.55Show/hide
Query:  PTSCPICFEDLDLTDSNFLPCPCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA
        P  CP+C E L++ D NF PC CG+++C FC  RI  +E+G CP CRKPY  DPA
Subjt:  PTSCPICFEDLDLTDSNFLPCPCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA

Q9M9M4 Cellulose synthase-like protein D33.0e-0433.82Show/hide
Query:  DLTDSNFLPCPCGFRLCLFCHKRILEEDGRCPGCRKPY-DRDPADNETNEYSGSPTFPLARSCSMISR
        D    + LPC C F++C  C    ++  G CPGC++PY + D AD   N     P  P     S + R
Subjt:  DLTDSNFLPCPCGFRLCLFCHKRILEEDGRCPGCRKPY-DRDPADNETNEYSGSPTFPLARSCSMISR

Arabidopsis top hitse value%identityAlignment
AT1G74870.1 RING/U-box superfamily protein4.1e-1728.88Show/hide
Query:  SKKRRAR-NSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGNDS
        SKKR+A    KLKQ K+D RR+QW+S+    N    +   RL S +      +KL  +K  R D  +++D  +    + + S ++SP    +S+L   DS
Subjt:  SKKRRAR-NSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGNDS

Query:  GHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSRNELGIGDGDSSIEHGRIARRAS
                      S    C S  +TEEEE E  DD  ++W+ F D L + +  +++ S       +V++     D   E      D+S    +  + A+
Subjt:  GHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSRNELGIGDGDSSIEHGRIARRAS

Query:  MNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFCHKRILEEDGRCPGCRKPYDRD
           +           ++   S +    N++++ G G               CPIC E +D TD  F PC CGFR+CLFCH +I E + RCP CRK Y + 
Subjt:  MNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFCHKRILEEDGRCPGCRKPYDRD

Query:  PADNETNEYS--GSPTFPLARSCSMISRS
           +    Y   G  T PL+ S   + R+
Subjt:  PADNETNEYS--GSPTFPLARSCSMISRS

AT3G45630.1 RNA binding (RRM/RBD/RNP motifs) family protein8.9e-1242.86Show/hide
Query:  SCPICFEDLDLTDSNFLPCPCGFRLCLFCHKRIL------EEDGRCPGCRKPYDRD
        +CP+C E++DLTD    PC CG+++C++C   I+      + +GRCP CR PYD++
Subjt:  SCPICFEDLDLTDSNFLPCPCGFRLCLFCHKRIL------EEDGRCPGCRKPYDRD

AT3G48070.1 RING/U-box superfamily protein5.3e-6546.93Show/hide
Query:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNK--KWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIG------EEDDR
        M++DSI NAS + AP+ARD    KKR  R++KLKQSKL +RREQWLS+ A+ NK  K   E NR            ++ S+K ++RD+       +ED+ 
Subjt:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNK--KWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIG------EEDDR

Query:  SVHHHSDCSESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS--ESSPRGDVVS
          H H    ES SNSP    +SIL G +S  +F+ SSS     S S G  SG+IT EEED  DD CL+DWEA AD L A D++H++ +  ES    + + 
Subjt:  SVHHHSDCSESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS--ESSPRGDVVS

Query:  QLGSCGDSRNELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPC
        Q    G +   L     DS        RR   + +AWRPDD  RPQ LP L KQ S P  +  F           V  VP+SCPIC+EDLDLTDSNFLPC
Subjt:  QLGSCGDSRNELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPC

Query:  PCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS
        PCGFRLCLFCHK I + DGRCPGCRKPY+R+    E +   G  T  LARS SM  RS
Subjt:  PCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS

AT3G48070.2 RING/U-box superfamily protein1.2e-6446.78Show/hide
Query:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNK--KWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIG------EEDDR
        M++DSI NAS + AP+ARD    KKR  R++KLKQSKL +RREQWLS+ A+ NK  K   E NR            ++ S+K ++RD+       +ED+ 
Subjt:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNK--KWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIG------EEDDR

Query:  SVHHHSDCSESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS--ESSPRGDVVS
          H H    ES SNSP    +SIL G +S  +F+ SSS     S S G  SG+IT EEED  DD CL+DWEA AD L A D++H++ +  ES    + + 
Subjt:  SVHHHSDCSESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS--ESSPRGDVVS

Query:  QLGSCGDSRNELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPC
        Q    G +   L     DS        RR   + +AWRPDD  RPQ LP L KQ S P  +  F           V  VP+SCPIC+EDLDLTDSNFLPC
Subjt:  QLGSCGDSRNELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPC

Query:  PCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISR
        PCGFRLCLFCHK I + DGRCPGCRKPY+R+    E +   G  T  LARS SM  R
Subjt:  PCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISR

AT5G62910.1 RING/U-box superfamily protein5.0e-6346.05Show/hide
Query:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC
        M+TDSI NAS + AP  RD    KKR  +++K+KQ+KL +RREQWLS+ A+ NK+  +E +   S+       DK+      RR+       ++ HH   
Subjt:  MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDC

Query:  SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEE-DEGDDDCLEDWEAFADTLIATD--KQHDQCSESSPRGDVVSQLGS--C
         ESPSNS        +GG  S  +F+G SS SS  SSSSG  SG+ITEEE  D+ DD C++DWEA AD L A +  ++  +  ES      V Q  S  C
Subjt:  SESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEE-DEGDDDCLEDWEAFADTLIATD--KQHDQCSESSPRGDVVSQLGS--C

Query:  GDSRNELG--IGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCG
          S ++    +G  D   E  R++ R   + RAWR DD  RPQ LP L+KQLS P  D+RF            + +P+SCPIC+EDLDLTDSNFLPCPCG
Subjt:  GDSRNELG--IGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCG

Query:  FRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISR
        FRLCLFCHK I + DGRCPGCRKPY+R+    ET+   G  T  LARS SM  +
Subjt:  FRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTACTGATTCGATCGCTAATGCTTCAATTTCTTTGGCCCCTAGCGCCCGGGATTTGCCCCTGTCCAAGAAGAGGAGGGCTAGGAACTCCAAATTGAAGCAGTCCAA
GCTTGACGTTCGTCGCGAGCAATGGCTTTCTCGAGGTGCGATAAAGAACAAAAAATGGAGCAAAGAAGACAATCGGCTTGATTCAGAGGTCGTCAAAACGGTGGAAGATG
ATAAACTTCCCTCCAAAAAAATAAATAGGAGGGACATAGGAGAAGAGGACGACAGATCGGTCCACCATCACAGCGATTGTTCGGAGTCGCCGTCCAATAGCCCCCCTAGT
ATTGGAAGTAGTATCTTGGGTGGTAATGATTCGGGTCACCATTTTACTGGGAGTAGCAGTAGCAGTAGCTGCCGCAGCAGTTCTAGTGGGTGTCGCTCGGGGAGTATAAC
GGAGGAGGAGGAAGATGAAGGAGATGATGACTGCTTGGAAGATTGGGAGGCTTTTGCCGATACCCTAATCGCCACTGACAAGCAGCATGATCAATGCTCCGAGTCTTCCC
CTAGGGGCGATGTTGTTTCTCAATTGGGTTCTTGCGGAGACAGCAGAAATGAGTTGGGCATAGGAGATGGTGACTCGAGCATTGAGCATGGGAGAATTGCGCGGAGGGCT
TCAATGAATGGCCGAGCATGGAGGCCTGATGATGCCGATCGTCCCCAGAGTTTGCCCACGTTATCAAAACAGCTTAGTTTACCGAATACAGATCGGCGTTTTGGATGTGG
AGGCATCCCTTGGGCTTGTGGTGGTGTTATGCCTGTGCCTACATCTTGTCCAATTTGCTTTGAAGACTTAGACCTTACAGACTCCAACTTTTTACCTTGTCCCTGTGGAT
TCCGGCTATGCCTTTTCTGTCACAAGAGGATTCTTGAAGAGGATGGGCGTTGTCCTGGTTGCAGGAAGCCATATGATCGTGATCCTGCGGATAACGAGACAAACGAATAC
AGTGGCAGCCCGACGTTCCCATTGGCTCGTTCTTGTAGCATGATTTCAAGGTCTTAG
mRNA sequenceShow/hide mRNA sequence
TTTTTTTTTCTCTCTCTCTCTCTCTCTCTTTCTCTCCCCCTCGAAGATCTTCTCTCTCCCGGAAAATAAAAATATCCACACAAATTAGGGTTTCCTTGCGAACTTGGTTC
CTTCAATTCGATTTCAACTCTCCCATCATGGTTACTGATTCGATCGCTAATGCTTCAATTTCTTTGGCCCCTAGCGCCCGGGATTTGCCCCTGTCCAAGAAGAGGAGGGC
TAGGAACTCCAAATTGAAGCAGTCCAAGCTTGACGTTCGTCGCGAGCAATGGCTTTCTCGAGGTGCGATAAAGAACAAAAAATGGAGCAAAGAAGACAATCGGCTTGATT
CAGAGGTCGTCAAAACGGTGGAAGATGATAAACTTCCCTCCAAAAAAATAAATAGGAGGGACATAGGAGAAGAGGACGACAGATCGGTCCACCATCACAGCGATTGTTCG
GAGTCGCCGTCCAATAGCCCCCCTAGTATTGGAAGTAGTATCTTGGGTGGTAATGATTCGGGTCACCATTTTACTGGGAGTAGCAGTAGCAGTAGCTGCCGCAGCAGTTC
TAGTGGGTGTCGCTCGGGGAGTATAACGGAGGAGGAGGAAGATGAAGGAGATGATGACTGCTTGGAAGATTGGGAGGCTTTTGCCGATACCCTAATCGCCACTGACAAGC
AGCATGATCAATGCTCCGAGTCTTCCCCTAGGGGCGATGTTGTTTCTCAATTGGGTTCTTGCGGAGACAGCAGAAATGAGTTGGGCATAGGAGATGGTGACTCGAGCATT
GAGCATGGGAGAATTGCGCGGAGGGCTTCAATGAATGGCCGAGCATGGAGGCCTGATGATGCCGATCGTCCCCAGAGTTTGCCCACGTTATCAAAACAGCTTAGTTTACC
GAATACAGATCGGCGTTTTGGATGTGGAGGCATCCCTTGGGCTTGTGGTGGTGTTATGCCTGTGCCTACATCTTGTCCAATTTGCTTTGAAGACTTAGACCTTACAGACT
CCAACTTTTTACCTTGTCCCTGTGGATTCCGGCTATGCCTTTTCTGTCACAAGAGGATTCTTGAAGAGGATGGGCGTTGTCCTGGTTGCAGGAAGCCATATGATCGTGAT
CCTGCGGATAACGAGACAAACGAATACAGTGGCAGCCCGACGTTCCCATTGGCTCGTTCTTGTAGCATGATTTCAAGGTCTTAG
Protein sequenceShow/hide protein sequence
MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKEDNRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDCSESPSNSPPS
IGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCGDSRNELGIGDGDSSIEHGRIARRA
SMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNEY
SGSPTFPLARSCSMISRS