; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg10381 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10381
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTORTIFOLIA1-like protein 3
Genome locationCarg_Chr10:702716..703959
RNA-Seq ExpressionCarg10381
SyntenyCarg10381
Gene Ontology termsGO:0005874 - microtubule (cellular component)
GO:0008017 - microtubule binding (molecular function)
InterPro domainsIPR033337 - MT-associated protein TORTIFOLIA1/SPIRAL2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023162.1 TORTIFOLIA1-like protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-79100Show/hide
Query:  MDRTRLFQYENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRS
        MDRTRLFQYENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRS
Subjt:  MDRTRLFQYENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRS

Query:  GDRHGANVDAGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP
        GDRHGANVDAGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP
Subjt:  GDRHGANVDAGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP

XP_022921762.1 TORTIFOLIA1-like protein 3 [Cucurbita moschata]2.1e-7399.29Show/hide
Query:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVD
        +NFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVD
Subjt:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVD

Query:  AGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP
        AGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP
Subjt:  AGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP

XP_022988351.1 TORTIFOLIA1-like protein 3 [Cucurbita maxima]4.0e-7297.86Show/hide
Query:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVD
        +NFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCC+LPGADFLSSRFWKRAEGR SSSKFSTPIGATPLAPMRSRSGDRHGANVD
Subjt:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVD

Query:  AGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP
        AGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP
Subjt:  AGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP

XP_023516289.1 TORTIFOLIA1-like protein 3 [Cucurbita pepo subsp. pepo]6.9e-7297.14Show/hide
Query:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVD
        +NFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCC+LPGADFLSSRFWKRA+GRHSSSKFSTPIGATPLAPMRSRSGD HGANVD
Subjt:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVD

Query:  AGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP
        AGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP
Subjt:  AGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP

XP_038878681.1 TORTIFOLIA1-like protein 3 [Benincasa hispida]5.8e-6388.57Show/hide
Query:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVD
        +NFIGSSQNGMRSLETRVHGLE ALDEISYDLAVSSGRMSYANTPTTTCC+LPGADFLSSRFWKRAE RHS+SKFSTPI ATPLA MRSRSGDRHGANVD
Subjt:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVD

Query:  AGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP
        AG M  ENHRF VQRRGGFMVNPLA+RQ E RVVS+ ALP
Subjt:  AGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP

TrEMBL top hitse value%identityAlignment
A0A1S3BWA7 microtubule-associated protein TORTIFOLIA12.6e-6184.29Show/hide
Query:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVD
        +NFIGSSQNGMRSLETRVHGLE ALDEISYDLAVSSGRMSYANTPTTTCC+LPGADFLSSRFWKRAE RHS+SKFSTPI ATPLAP+RSRSGDRHG NVD
Subjt:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVD

Query:  AGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP
         G M  ENHRF +QRRGGFMVNPLA+RQ E R  S+  LP
Subjt:  AGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP

A0A5A7URW5 Microtubule-associated protein TORTIFOLIA17.7e-6183.57Show/hide
Query:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVD
        +NFIGSSQNGMRSLETRVHGLE ALDEISYDLAVSSGRMSY NTPTTTCC+LPGADFLSSRFWKRAE RHS+SKFSTPI ATPLAP+RSRSGDRHG NVD
Subjt:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVD

Query:  AGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP
         G M  ENHRF +QRRGGFMVNPLA+RQ E R  S+  LP
Subjt:  AGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP

A0A5D3BFQ9 Microtubule-associated protein TORTIFOLIA17.7e-6183.57Show/hide
Query:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVD
        +NFIGSSQNGMRSLETRVHGLE ALDEISYDLAVSSGRMSY NTPTTTCC+LPGADFLSSRFWKRAE RHS+SKFSTPI ATPLAP+RSRSGDRHG NVD
Subjt:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVD

Query:  AGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP
         G M  ENHRF +QRRGGFMVNPLA+RQ E R  S+  LP
Subjt:  AGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP

A0A6J1E1C9 TORTIFOLIA1-like protein 31.0e-7399.29Show/hide
Query:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVD
        +NFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVD
Subjt:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVD

Query:  AGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP
        AGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP
Subjt:  AGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP

A0A6J1JCT6 TORTIFOLIA1-like protein 31.9e-7297.86Show/hide
Query:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVD
        +NFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCC+LPGADFLSSRFWKRAEGR SSSKFSTPIGATPLAPMRSRSGDRHGANVD
Subjt:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVD

Query:  AGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP
        AGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP
Subjt:  AGFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP

SwissProt top hitse value%identityAlignment
Q6NPR6 TORTIFOLIA1-like protein 36.8e-2247.2Show/hide
Query:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVD
        + F+GSSQ+GMR LETRVHGLE ALDEISYDLAVS+GRMS  ++    CC+LP   F+ S+FWK+ + ++S+S+ ST          R+R       N +
Subjt:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVD

Query:  AGFMTPENHRFQVQRRGGFMVNPLA
           +    HRF      GF+VNPLA
Subjt:  AGFMTPENHRFQVQRRGGFMVNPLA

Q93ZH1 TORTIFOLIA1-like protein 44.4e-1352.11Show/hide
Query:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRM--SYANTPTTTCCMLPGADFLSSRFWKRAEGR
        + F+G+SQ+G++SLE+RV GLE ALDEIS DLAVS+GR+  + +     +C  LPG +FLS +FW++ E R
Subjt:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRM--SYANTPTTTCCMLPGADFLSSRFWKRAEGR

Q9T041 Microtubule-associated protein TORTIFOLIA18.3e-0442.11Show/hide
Query:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRM-----------SYANTPT
        + FIG S + M +LE RV GLER +++++ DL++SSGR            S+AN PT
Subjt:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRM-----------SYANTPT

Arabidopsis top hitse value%identityAlignment
AT1G27210.1 ARM repeat superfamily protein3.1e-1452.11Show/hide
Query:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRM--SYANTPTTTCCMLPGADFLSSRFWKRAEGR
        + F+G+SQ+G++SLE+RV GLE ALDEIS DLAVS+GR+  + +     +C  LPG +FLS +FW++ E R
Subjt:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRM--SYANTPTTTCCMLPGADFLSSRFWKRAEGR

AT1G50890.1 ARM repeat superfamily protein2.2e-0448.65Show/hide
Query:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSG
        ++F+G S +GM SLE RV GLER ++E+S ++++ SG
Subjt:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSG

AT1G59850.1 ARM repeat superfamily protein3.8e-0444Show/hide
Query:  YENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTC
        ++ F+ SS NGM+SLE RV GLE +   IS DL VS       N     C
Subjt:  YENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTC

AT4G27060.1 ARM repeat superfamily protein5.9e-0542.11Show/hide
Query:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRM-----------SYANTPT
        + FIG S + M +LE RV GLER +++++ DL++SSGR            S+AN PT
Subjt:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRM-----------SYANTPT

AT5G62580.1 ARM repeat superfamily protein4.8e-2347.2Show/hide
Query:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVD
        + F+GSSQ+GMR LETRVHGLE ALDEISYDLAVS+GRMS  ++    CC+LP   F+ S+FWK+ + ++S+S+ ST          R+R       N +
Subjt:  ENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVD

Query:  AGFMTPENHRFQVQRRGGFMVNPLA
           +    HRF      GF+VNPLA
Subjt:  AGFMTPENHRFQVQRRGGFMVNPLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGAACAAGGTTGTTCCAATATGAGAACTTCATTGGGAGTTCACAAAACGGAATGCGATCCTTGGAGACGCGTGTGCATGGTCTGGAACGGGCATTGGATGAGAT
CTCATATGATCTTGCTGTATCAAGTGGAAGGATGTCTTATGCTAACACCCCCACAACCACATGTTGCATGCTACCTGGAGCTGATTTTTTGAGCTCAAGGTTCTGGAAAA
GAGCAGAGGGCAGACACTCATCGTCAAAGTTCTCAACTCCCATTGGTGCAACTCCATTGGCTCCAATGCGCAGCAGATCAGGTGATCGCCATGGAGCTAATGTGGATGCT
GGATTTATGACTCCAGAGAACCATAGGTTTCAGGTCCAGCGAAGGGGTGGCTTTATGGTGAATCCATTGGCTTTGAGACAAGGTGAACCCAGGGTTGTCTCAAATGCGGC
ACTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGAACAAGGTTGTTCCAATATGAGAACTTCATTGGGAGTTCACAAAACGGAATGCGATCCTTGGAGACGCGTGTGCATGGTCTGGAACGGGCATTGGATGAGAT
CTCATATGATCTTGCTGTATCAAGTGGAAGGATGTCTTATGCTAACACCCCCACAACCACATGTTGCATGCTACCTGGAGCTGATTTTTTGAGCTCAAGGTTCTGGAAAA
GAGCAGAGGGCAGACACTCATCGTCAAAGTTCTCAACTCCCATTGGTGCAACTCCATTGGCTCCAATGCGCAGCAGATCAGGTGATCGCCATGGAGCTAATGTGGATGCT
GGATTTATGACTCCAGAGAACCATAGGTTTCAGGTCCAGCGAAGGGGTGGCTTTATGGTGAATCCATTGGCTTTGAGACAAGGTGAACCCAGGGTTGTCTCAAATGCGGC
ACTTCCTTGAGCAACTGGATCAGAAGGCACTAAAGAGCTTACGGCTATGGATTTTCTCATGCCTTTGCCATGGGAATCTAAAGCATTCCTTTGGAACTCTCAAATGATGC
AGAAAGCAACTACCATGATTTATGTTGTCGAGGTAATGAATTCCGTTTTGGATTTAAAATATTCTCTGGTATGTCTAAACCAAGTGATCTGAAAAATTTCAGTGAGAAGT
CCTAAAAAATTTGAGTGAGCTGTCAAGTTAAGTTTATCCTTTTTCTTTTATTACCTTTTTTTTGGAATTTGATTGAAATTGGAAAAAAGA
Protein sequenceShow/hide protein sequence
MDRTRLFQYENFIGSSQNGMRSLETRVHGLERALDEISYDLAVSSGRMSYANTPTTTCCMLPGADFLSSRFWKRAEGRHSSSKFSTPIGATPLAPMRSRSGDRHGANVDA
GFMTPENHRFQVQRRGGFMVNPLALRQGEPRVVSNAALP