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Carg10410 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10410
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionmini zinc finger protein 3-like
Genome locationCarg_Chr10:851558..851845
RNA-Seq ExpressionCarg10410
SyntenyCarg10410
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006456 - ZF-HD homeobox protein, Cys/His-rich dimerisation domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023191.1 Mini zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-48100Show/hide
Query:  MKKRVVVVKKSDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH
        MKKRVVVVKKSDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH
Subjt:  MKKRVVVVKKSDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH

XP_022135253.1 mini zinc finger protein 3-like [Momordica charantia]2.0e-4090.43Show/hide
Query:  MKKRVVVVKKSDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDH
        MKKR+VVVKKSDG GGR NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEAL CAAC CHRNFHRREVD+EVVFEYSPPNS +
Subjt:  MKKRVVVVKKSDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDH

XP_022921765.1 mini zinc finger protein 3-like [Cucurbita moschata]4.9e-4798.95Show/hide
Query:  MKKRVVVVKKSDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH
        MKKRVVVVKKSDG GGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH
Subjt:  MKKRVVVVKKSDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH

XP_022987207.1 mini zinc finger protein 3-like [Cucurbita maxima]1.1e-4697.89Show/hide
Query:  MKKRVVVVKKSDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH
        MKKRVVVVKKSDG GGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRR+VDAEVVFEYSPPNSDHH
Subjt:  MKKRVVVVKKSDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH

XP_023516615.1 mini zinc finger protein 3-like [Cucurbita pepo subsp. pepo]4.1e-4697.89Show/hide
Query:  MKKRVVVVKKSDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH
        MKKRVVVVKKSDG GGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSP NSDHH
Subjt:  MKKRVVVVKKSDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH

TrEMBL top hitse value%identityAlignment
A0A0A0LSA6 ZF-HD dimerization-type domain-containing protein1.2e-3886.32Show/hide
Query:  MKKRVVVVKKSDGPGGRGNR--SGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSD
        MKKR+VVV+KSDG  GR N   S SGS VRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEAL+CAACGCHRNFHRREVDAEVVFEYSPPNS+
Subjt:  MKKRVVVVKKSDGPGGRGNR--SGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSD

A0A5A7UWS7 Mini zinc finger protein 3-like1.5e-3885.42Show/hide
Query:  MKKRVVVVKKSDGPGGRGNR---SGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSD
        MKKR+VVVKKSDG  GR N    + SGS VRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEAL+CAACGCHRNFHRREVDAEVVFEYSPPNS+
Subjt:  MKKRVVVVKKSDGPGGRGNR---SGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSD

A0A6J1C4B2 mini zinc finger protein 3-like9.6e-4190.43Show/hide
Query:  MKKRVVVVKKSDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDH
        MKKR+VVVKKSDG GGR NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEAL CAAC CHRNFHRREVD+EVVFEYSPPNS +
Subjt:  MKKRVVVVKKSDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDH

A0A6J1E6Q9 mini zinc finger protein 3-like2.4e-4798.95Show/hide
Query:  MKKRVVVVKKSDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH
        MKKRVVVVKKSDG GGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH
Subjt:  MKKRVVVVKKSDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH

A0A6J1J9R5 mini zinc finger protein 3-like5.3e-4797.89Show/hide
Query:  MKKRVVVVKKSDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH
        MKKRVVVVKKSDG GGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRR+VDAEVVFEYSPPNSDHH
Subjt:  MKKRVVVVKKSDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH

SwissProt top hitse value%identityAlignment
B8BIU8 Mini zinc finger protein 12.4e-2064.79Show/hide
Query:  SDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDA
        S        R  +  VVRY ECQ+NHAA +GG AVDGCREFMA G EGT  AL CAACGCHR+FHRREV+A
Subjt:  SDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDA

Q2Q493 Mini zinc finger protein 39.9e-2763.83Show/hide
Query:  MKKRVVVVKKSDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDH
        MKKR VV+K+          + S S VRY ECQKNHAA +GG+AVDGCREFMA    G ++AL+CAACGCHRNFHRREVD EVV EYSPPN+++
Subjt:  MKKRVVVVKKSDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDH

Q9CA51 Mini zinc finger protein 12.6e-2761.39Show/hide
Query:  MKKRVVVVKK---------SDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPN
        MKKR +V+K+         S       + S   S VRY ECQKNHAA +GG+AVDGCREFMA G EGT +AL CAACGCHRNFHR+EVD EVV EYSPPN
Subjt:  MKKRVVVVKK---------SDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPN

Query:  S
        +
Subjt:  S

Q9LJW5 Mini zinc finger protein 21.0e-2358.76Show/hide
Query:  MKKRVVVVKKS--DGPGGRGNRSGSGSV--VRYAECQKNHAAKLGGFAVDGCREFMA-RGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNS
        M+KR VV++++  + P    + + S +V  VRY ECQKNHAA +GG+AVDGCREFMA RGEEGT  AL+CAACGCHR+FHRRE++ EVV + + P S
Subjt:  MKKRVVVVKKS--DGPGGRGNRSGSGSV--VRYAECQKNHAAKLGGFAVDGCREFMA-RGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNS

Q9SB61 Zinc-finger homeodomain protein 21.8e-2061.97Show/hide
Query:  SDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDA
        S G GG G   G G+ +RY EC KNHA  +GG AVDGC EFM  GE+GT +AL CAACGCHRNFHR+E ++
Subjt:  SDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDA

Arabidopsis top hitse value%identityAlignment
AT1G18835.1 mini zinc finger7.1e-2863.83Show/hide
Query:  MKKRVVVVKKSDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDH
        MKKR VV+K+          + S S VRY ECQKNHAA +GG+AVDGCREFMA    G ++AL+CAACGCHRNFHRREVD EVV EYSPPN+++
Subjt:  MKKRVVVVKKSDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDH

AT1G74660.1 mini zinc finger 11.9e-2861.39Show/hide
Query:  MKKRVVVVKK---------SDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPN
        MKKR +V+K+         S       + S   S VRY ECQKNHAA +GG+AVDGCREFMA G EGT +AL CAACGCHRNFHR+EVD EVV EYSPPN
Subjt:  MKKRVVVVKK---------SDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPN

Query:  S
        +
Subjt:  S

AT2G02540.1 homeobox protein 212.1e-1957.97Show/hide
Query:  VVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDH
        V++Y EC KNHAA +GG A+DGC EFM  GEEG+ EAL+C+ C CHRNFHRRE + E    +SP  + H
Subjt:  VVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDH

AT3G28917.1 mini zinc finger 27.3e-2558.76Show/hide
Query:  MKKRVVVVKKS--DGPGGRGNRSGSGSV--VRYAECQKNHAAKLGGFAVDGCREFMA-RGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNS
        M+KR VV++++  + P    + + S +V  VRY ECQKNHAA +GG+AVDGCREFMA RGEEGT  AL+CAACGCHR+FHRRE++ EVV + + P S
Subjt:  MKKRVVVVKKS--DGPGGRGNRSGSGSV--VRYAECQKNHAAKLGGFAVDGCREFMA-RGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNS

AT4G24660.1 homeobox protein 221.3e-2161.97Show/hide
Query:  SDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDA
        S G GG G   G G+ +RY EC KNHA  +GG AVDGC EFM  GE+GT +AL CAACGCHRNFHR+E ++
Subjt:  SDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAAGGGTGGTGGTGGTGAAGAAATCCGATGGGCCTGGGGGGCGAGGAAACCGGTCTGGTTCGGGCTCGGTCGTGCGCTACGCCGAGTGCCAGAAGAATCACGC
GGCGAAGCTCGGTGGGTTCGCGGTGGACGGTTGCCGTGAGTTCATGGCCAGAGGCGAGGAGGGGACTGAGGAGGCTCTCAGCTGCGCTGCTTGTGGCTGCCACCGGAATT
TTCATAGAAGAGAGGTGGATGCTGAAGTTGTTTTCGAGTATTCTCCTCCAAACTCCGATCATCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAAGGGTGGTGGTGGTGAAGAAATCCGATGGGCCTGGGGGGCGAGGAAACCGGTCTGGTTCGGGCTCGGTCGTGCGCTACGCCGAGTGCCAGAAGAATCACGC
GGCGAAGCTCGGTGGGTTCGCGGTGGACGGTTGCCGTGAGTTCATGGCCAGAGGCGAGGAGGGGACTGAGGAGGCTCTCAGCTGCGCTGCTTGTGGCTGCCACCGGAATT
TTCATAGAAGAGAGGTGGATGCTGAAGTTGTTTTCGAGTATTCTCCTCCAAACTCCGATCATCATTGA
Protein sequenceShow/hide protein sequence
MKKRVVVVKKSDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH