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Carg10416 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10416
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAuxin responsive SAUR protein
Genome locationCarg_Chr03:8921402..8921773
RNA-Seq ExpressionCarg10416
SyntenyCarg10416
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595237.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]2.0e-5691.23Show/hide
Query:  MKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCD
        MKG FIRACANKWRK+GSKVVPC  CE CCQWVLWS LHEDCFIPRDVPKGHLVVYVGEN RR VIKISLLNHPLFKALLDQAQDEFDFT NSKLCIPCD
Subjt:  MKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCD

Query:  ENLFLSVVRRATSP
        ENLFLSVVRRA+SP
Subjt:  ENLFLSVVRRATSP

KAG6604414.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]3.8e-68100Show/hide
Query:  MKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCD
        MKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCD
Subjt:  MKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCD

Query:  ENLFLSVVRRATSPDNRQSPLCL
        ENLFLSVVRRATSPDNRQSPLCL
Subjt:  ENLFLSVVRRATSPDNRQSPLCL

XP_016900724.1 PREDICTED: indole-3-acetic acid-induced protein ARG7 [Cucumis melo]1.9e-5990.16Show/hide
Query:  KGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDE
        KG FIRACANKWRKIGSKVVPC ACE CCQWVLWS LHEDCFIPRDVPKGHLVVYVGEN RR VIKISLLNHPLFKALLDQAQDEFDFT NSKLCIPCDE
Subjt:  KGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDE

Query:  NLFLSVVRRATSPDNRQSPLCL
        NLFLSVV RA++PDNRQ PL L
Subjt:  NLFLSVVRRATSPDNRQSPLCL

XP_022963217.1 auxin-induced protein 15A [Cucurbita moschata]7.4e-5690.35Show/hide
Query:  MKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCD
        MKG FIRACANKWRK+GSKVVPC  CE CCQWVLWS LHEDCFIPRDVPKGHLVVYVGEN RR VIKISLLNHPLFKALLDQAQDEFDFT NSKLCIPCD
Subjt:  MKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCD

Query:  ENLFLSVVRRATSP
        ENLFLSVV RA+SP
Subjt:  ENLFLSVVRRATSP

XP_038883934.1 auxin-responsive protein SAUR50 [Benincasa hispida]2.6e-6192.62Show/hide
Query:  KGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDE
        KG FIRACANKWRKIGSKVVPC ACE CCQWVLWS LHEDCFIPRDVPKGHLVVYVGENNRR VIKISLLNHPLFKALLDQAQDEFDFT NSKLCIPCDE
Subjt:  KGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDE

Query:  NLFLSVVRRATSPDNRQSPLCL
        NLFLSVVRRA+SPDNRQ PL L
Subjt:  NLFLSVVRRATSPDNRQSPLCL

TrEMBL top hitse value%identityAlignment
A0A1S4DXL1 indole-3-acetic acid-induced protein ARG79.2e-6090.16Show/hide
Query:  KGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDE
        KG FIRACANKWRKIGSKVVPC ACE CCQWVLWS LHEDCFIPRDVPKGHLVVYVGEN RR VIKISLLNHPLFKALLDQAQDEFDFT NSKLCIPCDE
Subjt:  KGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDE

Query:  NLFLSVVRRATSPDNRQSPLCL
        NLFLSVV RA++PDNRQ PL L
Subjt:  NLFLSVVRRATSPDNRQSPLCL

A0A2N9EJG5 Uncharacterized protein5.9e-5175.61Show/hide
Query:  MKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCD
        MKG  +R C NKWRK+GS+V PCAACE CCQW  W S HE+  IP+DVPKGHLVVYVGEN +R VIKI+LLNHPLFKALLDQA+DE+DFTT+SKLCIPCD
Subjt:  MKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCD

Query:  ENLFLSVVRRATSPDNRQSPLCL
        ENLFLSVVR A+SP++R+ PLCL
Subjt:  ENLFLSVVRRATSPDNRQSPLCL

A0A6J1CQ37 uncharacterized protein LOC1110136976.8e-5590.18Show/hide
Query:  MKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCD
        MKG FIRAC NKWRKIGSKVVPC ACE CCQWVLWS LHEDCFIP DVPKGHLVVYVGENNRR VIKISLLNHPLFKALLDQAQDEFDFT NSKLCIPCD
Subjt:  MKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCD

Query:  ENLFLSVVRRAT
        E+LFLSVV RA+
Subjt:  ENLFLSVVRRAT

A0A6J1HEL5 auxin-induced protein 15A3.6e-5690.35Show/hide
Query:  MKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCD
        MKG FIRACANKWRK+GSKVVPC  CE CCQWVLWS LHEDCFIPRDVPKGHLVVYVGEN RR VIKISLLNHPLFKALLDQAQDEFDFT NSKLCIPCD
Subjt:  MKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCD

Query:  ENLFLSVVRRATSP
        ENLFLSVV RA+SP
Subjt:  ENLFLSVVRRATSP

A0A6J1I941 auxin-induced protein 15A-like1.8e-5590.27Show/hide
Query:  MKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCD
        MKG FIRACANKWRK+GSKVVPC  CE CCQWVLWS LHEDCFIPRDVPKGHLVVYVGEN RR VIKISLLNHPLFKALLDQAQDEFDFT+NSKLCIPCD
Subjt:  MKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCD

Query:  ENLFLSVVRRATS
        ENLFLSVV RA+S
Subjt:  ENLFLSVVRRATS

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR504.3e-1455.38Show/hide
Query:  EDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLF
        EDC +P DVPKGH  VYVGEN  R ++ IS L HP F++LL +A++EF F  +  L IPCDE +F
Subjt:  EDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLF

P0DKL1 Auxin-responsive protein SAUR502.8e-1348.53Show/hide
Query:  HEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLS
        ++D  +P DVPKGH VVYVGE   R ++ IS L+HP F+ LL ++++EF F  +  + IPC E  FLS
Subjt:  HEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLS

P32295 Indole-3-acetic acid-induced protein ARG79.9e-1155.93Show/hide
Query:  DVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFT-TNSKLCIPCDENLF
        D PKG+L VYVGEN +R VI +S LN PLF+ LL QA++EF +      L IPC E+LF
Subjt:  DVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFT-TNSKLCIPCDENLF

P33080 Auxin-induced protein X10A6.4e-1051.61Show/hide
Query:  DVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFT-TNSKLCIPCDENLFLSV
        +VPKG+LVVYVG+  RR +I +S LN P F+ LL+QA++EF +      L IPC E+ FL+V
Subjt:  DVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFT-TNSKLCIPCDENLFLSV

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 108.9e-1249.23Show/hide
Query:  IPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSVV
        +P+DVPKGH  VYVG N  R ++ IS L+H  F+ LL  A++EF F  +  L IPCDE  F S++
Subjt:  IPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSVV

Arabidopsis top hitse value%identityAlignment
AT1G75590.1 SAUR-like auxin-responsive protein family3.0e-1543.42Show/hide
Query:  IPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSVVRRATSPDNRQS
        +P DVP GH+ VYVG + RR V++ + LNHP+ + LL QA++EF F     L IPC+E++F   +R  +  D+ +S
Subjt:  IPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSVVRRATSPDNRQS

AT2G21220.1 SAUR-like auxin-responsive protein family1.8e-1541.67Show/hide
Query:  KIGSKVVPCAACEQC---CQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSV
        K  SK+   A  +Q    C  +  +  +++  +P DVPKGH  VYVGE   R ++ IS L HP FK+LL QA++EF F  +  L IPC+E +F S+
Subjt:  KIGSKVVPCAACEQC---CQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSV

AT2G37030.1 SAUR-like auxin-responsive protein family7.7e-3554.03Show/hide
Query:  MKGGFIRACANKWRKIGSKV-VPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPC
        MK  FI++C  K +K+ SKV +PCA+CE C + + W+   E   IPRDVPKGHLVVYVGE  +R VI I+LL HPLF+ALLDQAQD + F+ +S+L IPC
Subjt:  MKGGFIRACANKWRKIGSKV-VPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPC

Query:  DENLFLSVVRRATSPDNRQSPLCL
        +E+ FL VVR A +P ++ + +C+
Subjt:  DENLFLSVVRRATSPDNRQSPLCL

AT3G53250.1 SAUR-like auxin-responsive protein family1.6e-2754.21Show/hide
Query:  KIGSKVVPC--AACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSVVRRAT
        K  S V+PC  ++CE CC  V W    E+  IP+DVP+GHLVVYVG++ +R VIK+SLL HP+FKALLDQAQD ++   +S+L IPCDEN FL VVR + 
Subjt:  KIGSKVVPC--AACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSVVRRAT

Query:  SPDNRQS
        +P ++++
Subjt:  SPDNRQS

AT5G03310.1 SAUR-like auxin-responsive protein family2.0e-1948.62Show/hide
Query:  ANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVG---ENNRRLVIKISLLNHPLFKALLDQAQDEF--DFTT-NSKLCIPCDENL
        A  W+++ S+V            V   +  +   IP DVPKGHLVVYVG   E  +R VIKI+LL+ P+F+ALLDQ++DE   DFT+ +SKLCI CDE L
Subjt:  ANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVG---ENNRRLVIKISLLNHPLFKALLDQAQDEF--DFTT-NSKLCIPCDENL

Query:  FLSVVRRAT
        FL V+R A+
Subjt:  FLSVVRRAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGGGGGTTTATAAGAGCATGCGCAAACAAATGGAGGAAGATAGGAAGCAAAGTGGTACCTTGTGCAGCCTGCGAGCAGTGTTGCCAATGGGTTTTGTGGTCTTC
CTTGCATGAGGATTGCTTCATTCCGCGAGACGTCCCAAAGGGTCACTTGGTTGTGTATGTGGGTGAGAATAACAGAAGGCTTGTAATCAAAATTAGCCTTCTCAATCATC
CTCTGTTCAAGGCATTGCTGGATCAAGCACAAGATGAGTTTGATTTCACTACGAACTCAAAACTCTGCATTCCTTGTGATGAGAACCTTTTCCTTAGTGTTGTCCGCCGC
GCTACCTCACCTGATAATCGACAGAGCCCTCTGTGTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGGGGGTTTATAAGAGCATGCGCAAACAAATGGAGGAAGATAGGAAGCAAAGTGGTACCTTGTGCAGCCTGCGAGCAGTGTTGCCAATGGGTTTTGTGGTCTTC
CTTGCATGAGGATTGCTTCATTCCGCGAGACGTCCCAAAGGGTCACTTGGTTGTGTATGTGGGTGAGAATAACAGAAGGCTTGTAATCAAAATTAGCCTTCTCAATCATC
CTCTGTTCAAGGCATTGCTGGATCAAGCACAAGATGAGTTTGATTTCACTACGAACTCAAAACTCTGCATTCCTTGTGATGAGAACCTTTTCCTTAGTGTTGTCCGCCGC
GCTACCTCACCTGATAATCGACAGAGCCCTCTGTGTCTTTGA
Protein sequenceShow/hide protein sequence
MKGGFIRACANKWRKIGSKVVPCAACEQCCQWVLWSSLHEDCFIPRDVPKGHLVVYVGENNRRLVIKISLLNHPLFKALLDQAQDEFDFTTNSKLCIPCDENLFLSVVRR
ATSPDNRQSPLCL