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Carg10418 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10418
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHTH myb-type domain-containing protein
Genome locationCarg_Chr03:8908275..8911723
RNA-Seq ExpressionCarg10418
SyntenyCarg10418
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034563.1 hypothetical protein SDJN02_04293 [Cucurbita argyrosperma subsp. argyrosperma]2.7e-37100Show/hide
Query:  MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNGGELL
        MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNGGELL
Subjt:  MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNGGELL

XP_022925801.1 uncharacterized protein LOC111433102 isoform X1 [Cucurbita moschata]7.4e-35100Show/hide
Query:  MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNG
        MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNG
Subjt:  MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNG

XP_022925803.1 uncharacterized protein LOC111433102 isoform X2 [Cucurbita moschata]7.4e-3595.89Show/hide
Query:  MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNGGEL
        MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTN  E+
Subjt:  MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNGGEL

XP_022925806.1 uncharacterized protein LOC111433102 isoform X4 [Cucurbita moschata]7.4e-35100Show/hide
Query:  MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNG
        MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNG
Subjt:  MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNG

XP_023543747.1 uncharacterized protein LOC111803529 isoform X2 [Cucurbita pepo subsp. pepo]7.4e-3595.89Show/hide
Query:  MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNGGEL
        MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTN  E+
Subjt:  MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNGGEL

TrEMBL top hitse value%identityAlignment
A0A6J1ECM4 uncharacterized protein LOC111433102 isoform X13.6e-35100Show/hide
Query:  MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNG
        MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNG
Subjt:  MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNG

A0A6J1ED68 uncharacterized protein LOC111433102 isoform X43.6e-35100Show/hide
Query:  MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNG
        MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNG
Subjt:  MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNG

A0A6J1EGA3 uncharacterized protein LOC111433102 isoform X23.6e-3595.89Show/hide
Query:  MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNGGEL
        MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTN  E+
Subjt:  MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNGGEL

A0A6J1IIN6 uncharacterized protein LOC111477818 isoform X21.0e-3494.52Show/hide
Query:  MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNGGEL
        MDQEVHFCQKFTNMNYHWVK+EGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTN  E+
Subjt:  MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNGGEL

A0A6J1IK21 uncharacterized protein LOC111477818 isoform X11.0e-3498.57Show/hide
Query:  MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNG
        MDQEVHFCQKFTNMNYHWVK+EGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNG
Subjt:  MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAAGAAGTGCATTTCTGCCAGAAGTTCACAAATATGAATTATCATTGGGTAAAAATGGAGGGATCTTTTCTTCCTGCACCATTAAATGAATCAAATGAAGTCGA
TCATTTTCTTGTGGAGCCTAAAAGCGACCATGAATTAGGAAATTGCTTGAGAGTTCAAGATTTCTCTCGTGACTTTGGCTACGAAATACAAACAAATGGTGGTGAACTCT
TATGA
mRNA sequenceShow/hide mRNA sequence
TAACCTCTCTGCCATCGCTCTTTTGGCGGTTTAAAAGGATTGCATTTGTATTTTTTCTTCTTTTCGGTTTGGAACCTCTGACGCAACGCTCGCGTCTCTCCCCAATCCTC
TAATCGAGCTGAACTCGGATCTTCAGCTTCCTTGCTGGATTGAGCTTAAGAGTAAATGGATCAAGAAGTGCATTTCTGCCAGAAGTTCACAAATATGAATTATCATTGGG
TAAAAATGGAGGGATCTTTTCTTCCTGCACCATTAAATGAATCAAATGAAGTCGATCATTTTCTTGTGGAGCCTAAAAGCGACCATGAATTAGGAAATTGCTTGAGAGTT
CAAGATTTCTCTCGTGACTTTGGCTACGAAATACAAACAAATGGTGGTGAACTCTTATGATCCATTCCTTATGCTTTTATTAGTGCTAATTTGCACTCTACTCATTGGGC
TTCTTCCATCCATGTTCTTTTGTTTTGGTATTTGTTGGCGAACTGTAGTCTTATCCTATTTTCCCTATAAGCTCAACATATAGAAAGGGTCTTTATTGGTCTGATGTGAA
TATGTTTTGGAAACCTTTCCTTGTATATGTGGACAAATCCAGAAAAGTGATGCTAATTATTGAGTTCAACATGCTTAGACATTTTAAATTTATTTTCCAATAATTTTTTT
TTTTTACATCAGTAAGCAATCTAATCCTGGCCAATTTCTTTTATTACCTATAAGGTGGATTGGATTCTAATAGCAAGCAGGGACGCAAATATAAACTTGAATTGGAGTAT
GCTTCTATCTTATGATATTTTCATGTCATGCGAATTGATCATTTCATCATGTCTTAAAGTGGTAGAGAGGTTCAGCCTTTGAGAATCAAATGAGGGAAAGTATAGATGTT
GATGTGCTAAATGGTTGTTTCTTAGACTTTGACCTCCTCATTGAAACTCTCTCCTCTTTTCGACCTTAAGGACCCAAGTTATTTGCCTATGAATCC
Protein sequenceShow/hide protein sequence
MDQEVHFCQKFTNMNYHWVKMEGSFLPAPLNESNEVDHFLVEPKSDHELGNCLRVQDFSRDFGYEIQTNGGELL