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Carg10468 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10468
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description60S acidic ribosomal protein P2-like
Genome locationCarg_Chr03:8612299..8613442
RNA-Seq ExpressionCarg10468
SyntenyCarg10468
Gene Ontology termsGO:0002182 - cytoplasmic translational elongation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain
IPR044076 - Ribosomal protein P2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604363.1 hypothetical protein SDJN03_04972, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4799.11Show/hide
Query:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAGGGGAASAAVAAEPVNEDKKEVEE
        MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEV+DERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAGGGGAASAAVAAEPVNEDKKEVEE
Subjt:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAGGGGAASAAVAAEPVNEDKKEVEE

Query:  ESEDEMCFSLFD
        ESEDEMCFSLFD
Subjt:  ESEDEMCFSLFD

XP_004143310.2 60S acidic ribosomal protein P2 [Cucumis sativus]4.6e-3677.39Show/hide
Query:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAG---GGGAASAAVAAEPVNEDKKE
        MKIVAAYLLA+LGGNTHPS+ DI AIL SVG+E EDERIELLLSQVKGKD+AE++A GREKMA +   GSAIPVAAG   GGGAA+A VAAEPV EDKKE
Subjt:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAG---GGGAASAAVAAEPVNEDKKE

Query:  VEEESEDEMCFSLFD
        V EES+++MCFSLFD
Subjt:  VEEESEDEMCFSLFD

XP_022925971.1 60S acidic ribosomal protein P2-like [Cucurbita moschata]5.2e-48100Show/hide
Query:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAGGGGAASAAVAAEPVNEDKKEVEE
        MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAGGGGAASAAVAAEPVNEDKKEVEE
Subjt:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAGGGGAASAAVAAEPVNEDKKEVEE

Query:  ESEDEMCFSLFD
        ESEDEMCFSLFD
Subjt:  ESEDEMCFSLFD

XP_022977389.1 60S acidic ribosomal protein P2-like [Cucurbita maxima]1.7e-4698.21Show/hide
Query:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAGGGGAASAAVAAEPVNEDKKEVEE
        MKIVAAYLLA LGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAGGGGAASAAVAAEPV EDKKEVEE
Subjt:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAGGGGAASAAVAAEPVNEDKKEVEE

Query:  ESEDEMCFSLFD
        ESEDEMCFSLFD
Subjt:  ESEDEMCFSLFD

XP_023543240.1 60S acidic ribosomal protein P2-2-like [Cucurbita pepo subsp. pepo]3.7e-4697.32Show/hide
Query:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAGGGGAASAAVAAEPVNEDKKEVEE
        MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKG+DLAEVIASGREKMASISSVGSAIPVAAGGGGAASAAVAAEPV EDKKE EE
Subjt:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAGGGGAASAAVAAEPVNEDKKEVEE

Query:  ESEDEMCFSLFD
        ESEDEMCFSLFD
Subjt:  ESEDEMCFSLFD

TrEMBL top hitse value%identityAlignment
A0A0A0KKF6 Uncharacterized protein2.2e-3677.39Show/hide
Query:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAG---GGGAASAAVAAEPVNEDKKE
        MKIVAAYLLA+LGGNTHPS+ DI AIL SVG+E EDERIELLLSQVKGKD+AE++A GREKMA +   GSAIPVAAG   GGGAA+A VAAEPV EDKKE
Subjt:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAG---GGGAASAAVAAEPVNEDKKE

Query:  VEEESEDEMCFSLFD
        V EES+++MCFSLFD
Subjt:  VEEESEDEMCFSLFD

A0A6J1CQB9 60S acidic ribosomal protein P2A-like6.2e-3172.65Show/hide
Query:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAI----PVAAGGGGAASAAVAAEP-VNEDK
        MKIVAAYLLAVLGGN  PSV+ I AILGSVG+EVED+RIELLLSQVKG DLAE++A GREKMASI   G+AI    P AAGG   A A+VAAEP   EDK
Subjt:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAI----PVAAGGGGAASAAVAAEP-VNEDK

Query:  KEVEEESEDEMCFSLFD
        KEV EES+++MCFSLFD
Subjt:  KEVEEESEDEMCFSLFD

A0A6J1EDL3 60S acidic ribosomal protein P2-like2.5e-48100Show/hide
Query:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAGGGGAASAAVAAEPVNEDKKEVEE
        MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAGGGGAASAAVAAEPVNEDKKEVEE
Subjt:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAGGGGAASAAVAAEPVNEDKKEVEE

Query:  ESEDEMCFSLFD
        ESEDEMCFSLFD
Subjt:  ESEDEMCFSLFD

A0A6J1IM66 60S acidic ribosomal protein P2-like8.1e-4798.21Show/hide
Query:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAGGGGAASAAVAAEPVNEDKKEVEE
        MKIVAAYLLA LGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAGGGGAASAAVAAEPV EDKKEVEE
Subjt:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAGGGGAASAAVAAEPVNEDKKEVEE

Query:  ESEDEMCFSLFD
        ESEDEMCFSLFD
Subjt:  ESEDEMCFSLFD

A0A6S7L8U1 Uncharacterized protein4.5e-2969.03Show/hide
Query:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPV-AAGGGGAASAAVAAEPVNEDKKEVE
        MK+VAAYLLA+LGGNT PS ED+  ILGSVG E E++RIELLLS+VKGKD+ E+IASGREK+AS+ S G  + V AA GGGAA AA AAEP  E+K E +
Subjt:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPV-AAGGGGAASAAVAAEPVNEDKKEVE

Query:  EESEDEMCFSLFD
        EES+DEM FSLFD
Subjt:  EESEDEMCFSLFD

SwissProt top hitse value%identityAlignment
O01725 60S acidic ribosomal protein P21.6e-2358.12Show/hide
Query:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAGGGGAAS----AAVAAEPVNEDKK
        M+ VAAYLLAVLGGN +PS  DI  ILGSVGI+ EDER+  ++ ++KGKD+ EV+A+GR K++S+ S G  +  AAGGGGAA+    AA AAE   E+KK
Subjt:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAGGGGAAS----AAVAAEPVNEDKK

Query:  -EVEEESEDEMCFSLFD
         E EEES+D+M F LFD
Subjt:  -EVEEESEDEMCFSLFD

P41099 60S acidic ribosomal protein P21.3e-2559.65Show/hide
Query:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAA--GGGGAASAAVAAEPVNEDKKEV
        MK++AA+LLA+LGGNT P+ ED+ +IL SVG + +D++IELLLSQVKGKD+ E+IASGRE++AS+ S G     AA  GGGG A AA A EP  E+K   
Subjt:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAA--GGGGAASAAVAAEPVNEDKKEV

Query:  EEESEDEMCFSLFD
        EEES++E+ FSLFD
Subjt:  EEESEDEMCFSLFD

P46252 60S acidic ribosomal protein P2A8.4e-2558.93Show/hide
Query:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAGGGGAASAAVAAEPVNEDKKEVEE
        MK VAAYLLAVL GN  PS +D+ AIL SVG EV++E++ELLLSQ+ GKD+ E+IA+GREK AS+   G  + VAA    A  AA AAE   E+K E +E
Subjt:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAGGGGAASAAVAAEPVNEDKKEVEE

Query:  ESEDEMCFSLFD
        ES+D+M FSLFD
Subjt:  ESEDEMCFSLFD

P51407 60S acidic ribosomal protein P2-18.4e-2559.13Show/hide
Query:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGS---AIPVAAGGGGAASAAVAAEPVNEDKKE
        MK+VAA+LLAVL G   P+  DI  ILGSVG E ED +IELLL +VKGKDLAE+IA+GREK+AS+ S G    A+  A  GGG    A AAE   E+KKE
Subjt:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGS---AIPVAAGGGGAASAAVAAEPVNEDKKE

Query:  VEEESEDEMCFSLFD
         +EES+D+M FSLF+
Subjt:  VEEESEDEMCFSLFD

Q9SLF7 60S acidic ribosomal protein P2-22.2e-2560Show/hide
Query:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGS---AIPVAAGGGGAASAAVAAEPVNEDKKE
        MK+VAAYLLAVL G   P+  DI  ILGSVG E ED +IELLL +VKGKDLAE+IA+GREK+AS+ S G    A+  A  GGG    A AAE   E+KKE
Subjt:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGS---AIPVAAGGGGAASAAVAAEPVNEDKKE

Query:  VEEESEDEMCFSLFD
         +EES+D+M FSLF+
Subjt:  VEEESEDEMCFSLFD

Arabidopsis top hitse value%identityAlignment
AT2G27710.1 60S acidic ribosomal protein family1.6e-2660Show/hide
Query:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGS---AIPVAAGGGGAASAAVAAEPVNEDKKE
        MK+VAAYLLAVL G   P+  DI  ILGSVG E ED +IELLL +VKGKDLAE+IA+GREK+AS+ S G    A+  A  GGG    A AAE   E+KKE
Subjt:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGS---AIPVAAGGGGAASAAVAAEPVNEDKKE

Query:  VEEESEDEMCFSLFD
         +EES+D+M FSLF+
Subjt:  VEEESEDEMCFSLFD

AT2G27710.2 60S acidic ribosomal protein family1.6e-2660Show/hide
Query:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGS---AIPVAAGGGGAASAAVAAEPVNEDKKE
        MK+VAAYLLAVL G   P+  DI  ILGSVG E ED +IELLL +VKGKDLAE+IA+GREK+AS+ S G    A+  A  GGG    A AAE   E+KKE
Subjt:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGS---AIPVAAGGGGAASAAVAAEPVNEDKKE

Query:  VEEESEDEMCFSLFD
         +EES+D+M FSLF+
Subjt:  VEEESEDEMCFSLFD

AT2G27710.3 60S acidic ribosomal protein family1.6e-2660Show/hide
Query:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGS---AIPVAAGGGGAASAAVAAEPVNEDKKE
        MK+VAAYLLAVL G   P+  DI  ILGSVG E ED +IELLL +VKGKDLAE+IA+GREK+AS+ S G    A+  A  GGG    A AAE   E+KKE
Subjt:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGS---AIPVAAGGGGAASAAVAAEPVNEDKKE

Query:  VEEESEDEMCFSLFD
         +EES+D+M FSLF+
Subjt:  VEEESEDEMCFSLFD

AT2G27710.4 60S acidic ribosomal protein family4.3e-2458.93Show/hide
Query:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAGGGGAASAAVAAEPVNEDKKEVEE
        MK+VAAYLLAVL G   P+  DI  ILGSVG E ED +IELLL +VKGKDLAE+IA+GREK+AS+ S          GGGA+    AAE   E+KKE +E
Subjt:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAGGGGAASAAVAAEPVNEDKKEVEE

Query:  ESEDEMCFSLFD
        ES+D+M FSLF+
Subjt:  ESEDEMCFSLFD

AT2G27720.1 60S acidic ribosomal protein family6.0e-2659.13Show/hide
Query:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGS---AIPVAAGGGGAASAAVAAEPVNEDKKE
        MK+VAA+LLAVL G   P+  DI  ILGSVG E ED +IELLL +VKGKDLAE+IA+GREK+AS+ S G    A+  A  GGG    A AAE   E+KKE
Subjt:  MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGS---AIPVAAGGGGAASAAVAAEPVNEDKKE

Query:  VEEESEDEMCFSLFD
         +EES+D+M FSLF+
Subjt:  VEEESEDEMCFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATAGTTGCGGCGTATTTGTTGGCTGTTTTGGGCGGAAACACTCACCCTTCGGTTGAGGATATCAACGCCATTCTCGGCTCTGTTGGAATAGAGGTTGAAGATGA
AAGAATAGAGTTGCTTCTTTCCCAAGTTAAGGGCAAAGATTTAGCAGAGGTCATAGCCAGTGGAAGGGAGAAGATGGCATCAATCTCTTCTGTTGGTTCTGCTATTCCTG
TAGCTGCCGGCGGCGGTGGCGCTGCTTCTGCTGCTGTGGCTGCCGAGCCTGTGAATGAGGACAAGAAAGAAGTTGAAGAAGAGTCAGAGGATGAGATGTGCTTCAGTCTC
TTTGATTAA
mRNA sequenceShow/hide mRNA sequence
TTTAAATTCTTTCGTATAACTTAGCTTCTTTCTCCAATTCCACCATTCATCTTGTGCGATTGTTTTCTCCTCCGTCTCCGGTATGTTCTTCGTCTCCTTCATCCATTCTG
TTCATGTTTTAGTTACATTGGGCAGAGTGTTTTAACACGGTTTGATTCGAGCTTCCTTTTCTTTTTATAGATTTTCAGAGATGAAGATAGTTGCGGCGTATTTGTTGGCT
GTTTTGGGCGGAAACACTCACCCTTCGGTTGAGGATATCAACGCCATTCTCGGCTCTGTTGGAATAGAGGTTGAAGATGAAAGAATAGAGTTGCTTCTTTCCCAAGTTAA
GGGCAAAGATTTAGCAGAGGTCATAGCCAGTGGAAGGGAGAAGATGGCATCAATCTCTTCTGTTGGTTCTGCTATTCCTGTAGCTGCCGGCGGCGGTGGCGCTGCTTCTG
CTGCTGTGGCTGCCGAGCCTGTGAATGAGGACAAGAAAGAAGTTGAAGAAGAGTCAGAGGATGAGATGTGCTTCAGTCTCTTTGATTAACCAGATTTTGCAACCCTCCCT
TACACAGTACTCGGATTCATTCAAATTGCTATCTAGAGACCTGGATTTTTGGTTACTTAATTATGATATAGGATGAACTATTATGACCAGTTATAGTTATAGACCCATTT
AGTTTTATGTGAATTTATCAATTCCTGGCTAGTTTATGTCTCTTGTATGGCATGTTCTTCAGCATTTCTATAAAATATTTCCAAGTTTTGAAGTGTTTTGTCCGTTTTCT
TTCACCCCTAGCTCAAGAACATCTCTCTGATTGGATAGCCCATAACTTGCAAGAAACTTGCTTTAATTTATCTATGCTTAAATTTATGTATGATTGGATATCCCTTAGCT
CAAAAAGTTCTTGACTGATGGTTGAATCCAA
Protein sequenceShow/hide protein sequence
MKIVAAYLLAVLGGNTHPSVEDINAILGSVGIEVEDERIELLLSQVKGKDLAEVIASGREKMASISSVGSAIPVAAGGGGAASAAVAAEPVNEDKKEVEEESEDEMCFSL
FD