; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg10479 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10479
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein BIC1-like
Genome locationCarg_Chr03:8565118..8565504
RNA-Seq ExpressionCarg10479
SyntenyCarg10479
Gene Ontology termsGO:0009785 - blue light signaling pathway (biological process)
InterPro domainsIPR040374 - Protein BIC


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025256.1 protein BIC1 isoform X1 [Cucumis melo var. makuwa]4.1e-3366.17Show/hide
Query:  MTLPI-KPNSPL------SPHLQHSDQTTHHHDLHTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAR
        MTLP   PNS L       PHLQ SDQT   HD      +   ++ RERLKRHR+AVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGI+ AR ALAR
Subjt:  MTLPI-KPNSPL------SPHLQHSDQTTHHHDLHTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAR

Query:  EAKRSSPNNNTATAATTTTTAPAAASGDLRLLN
        +AKR SPNNNTATA  T      AA+G LR+LN
Subjt:  EAKRSSPNNNTATAATTTTTAPAAASGDLRLLN

KAG6604351.1 Protein BIC1, partial [Cucurbita argyrosperma subsp. sororia]1.9e-6297.66Show/hide
Query:  MTLPIKPNSPLSPHLQHSDQTTHHHDLHTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREAKRSSP
        MTLPIKPNSPLSPHLQHSDQTTHHHDLHTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREAKRSSP
Subjt:  MTLPIKPNSPLSPHLQHSDQTTHHHDLHTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREAKRSSP

Query:  NNNTATAATTTTTAPAAASGDLRLLNGC
        NNN AT  TTTTTAPAAASGDLRLLNGC
Subjt:  NNNTATAATTTTTAPAAASGDLRLLNGC

KAG7034502.1 Protein BIC1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-65100Show/hide
Query:  MTLPIKPNSPLSPHLQHSDQTTHHHDLHTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREAKRSSP
        MTLPIKPNSPLSPHLQHSDQTTHHHDLHTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREAKRSSP
Subjt:  MTLPIKPNSPLSPHLQHSDQTTHHHDLHTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREAKRSSP

Query:  NNNTATAATTTTTAPAAASGDLRLLNGC
        NNNTATAATTTTTAPAAASGDLRLLNGC
Subjt:  NNNTATAATTTTTAPAAASGDLRLLNGC

XP_011657706.1 protein BIC1 [Cucumis sativus]1.1e-3368.7Show/hide
Query:  MTLPI-KPNS----PLSPHLQHSDQTTHHHDLHTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREA
        MTLP   PNS    P  PHLQ SDQT   HD         D++ RERLKRHR+AVAGHVWIPDKWGKEEFLKDWIDGSAFEASLF SGI+ AR ALAR+A
Subjt:  MTLPI-KPNS----PLSPHLQHSDQTTHHHDLHTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREA

Query:  KRSSPNNNTATAATTTTTAPAAASGDLRLLN
        KR SPNNNTATAA T T    AA+G LR+LN
Subjt:  KRSSPNNNTATAATTTTTAPAAASGDLRLLN

XP_038882952.1 protein BIC2-like [Benincasa hispida]2.1e-3265.93Show/hide
Query:  MTLPI-KPNSPLSPH--LQHSDQT---THHHDLH-TSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAR
        MTLP  KPNSPL  H  LQ SDQ+    H   L  TSS +  +++ RERLKRHRVAVAG VWIPDKWGKEEFLKDWIDGSAFEASLFPSGI+ AR+ALAR
Subjt:  MTLPI-KPNSPLSPH--LQHSDQT---THHHDLH-TSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAR

Query:  EAKRSSPNNNTATAATTTTTAPAAASGDLRLLNGC
        +AKR SPNNN A       T  AA +G LR+LN C
Subjt:  EAKRSSPNNNTATAATTTTTAPAAASGDLRLLNGC

TrEMBL top hitse value%identityAlignment
A0A0A0KFC4 Uncharacterized protein5.3e-3468.7Show/hide
Query:  MTLPI-KPNS----PLSPHLQHSDQTTHHHDLHTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREA
        MTLP   PNS    P  PHLQ SDQT   HD         D++ RERLKRHR+AVAGHVWIPDKWGKEEFLKDWIDGSAFEASLF SGI+ AR ALAR+A
Subjt:  MTLPI-KPNS----PLSPHLQHSDQTTHHHDLHTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREA

Query:  KRSSPNNNTATAATTTTTAPAAASGDLRLLN
        KR SPNNNTATAA T T    AA+G LR+LN
Subjt:  KRSSPNNNTATAATTTTTAPAAASGDLRLLN

A0A5D3C697 Protein BIC1 isoform X12.0e-3366.17Show/hide
Query:  MTLPI-KPNSPL------SPHLQHSDQTTHHHDLHTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAR
        MTLP   PNS L       PHLQ SDQT   HD      +   ++ RERLKRHR+AVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGI+ AR ALAR
Subjt:  MTLPI-KPNSPL------SPHLQHSDQTTHHHDLHTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAR

Query:  EAKRSSPNNNTATAATTTTTAPAAASGDLRLLN
        +AKR SPNNNTATA  T      AA+G LR+LN
Subjt:  EAKRSSPNNNTATAATTTTTAPAAASGDLRLLN

A0A6J1HFE1 protein BIC1-like4.2e-3162.4Show/hide
Query:  PIKPNSPLSPHLQHSDQTTHHHDLHTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREAKRSSPNNN
        P+KP SPL P  Q SDQ +    L     +  ++   ERLKRHRVAVAG VWIP+KWGKEE LKDWIDGSAFEASLFPSGI+ AR+ALAREAKRSSPNNN
Subjt:  PIKPNSPLSPHLQHSDQTTHHHDLHTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREAKRSSPNNN

Query:  TATAATTTTTAPAAASGDLRLLNGC
        +A A+ T        +G LR+LN C
Subjt:  TATAATTTTTAPAAASGDLRLLNGC

A0A6J1I6F1 protein BIC1-like1.7e-3263.28Show/hide
Query:  MTLPIKPNSPLSPHLQHSDQTTHHHDLHTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREAKRSSP
        +T P+KP SPL P  Q SDQ +    L     + +++   ERLKRHRVAVAG VWIP+KWGKEE LKDWIDGSAFEASLFPSGI+ AR+ALAREAKRSSP
Subjt:  MTLPIKPNSPLSPHLQHSDQTTHHHDLHTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREAKRSSP

Query:  NNNTATAATTTTTAPAAASGDLRLLNGC
        NNN+ATA        +AA+G LR+LN C
Subjt:  NNNTATAATTTTTAPAAASGDLRLLNGC

M5VRF4 Uncharacterized protein4.1e-1865.28Show/hide
Query:  HTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREAKRSS
        H  S V  +D+ RERLK+HRV VAG VWIPD WG+EE LKDW+D SAF+ASLFPSGIM AR AL  E +R +
Subjt:  HTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREAKRSS

SwissProt top hitse value%identityAlignment
Q9LXJ1 Protein BIC11.4e-1560.32Show/hide
Query:  DTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREAKRSS
        DT RERLK+HR  +AG VWIP+ WG+EE LKDWID S F+  L P+GI  AR AL  EA+R++
Subjt:  DTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREAKRSS

Q9M280 Protein BIC21.9e-0943.62Show/hide
Query:  LPIKPNSPLSPHLQHSDQT-THHHDLHTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREA
        LP +   P+SP   H  Q  T        +TV S    R+RLKRHR  VAG V IPD WGKE  L  W+D S F+A+   S I+ AR AL  ++
Subjt:  LPIKPNSPLSPHLQHSDQT-THHHDLHTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREA

Arabidopsis top hitse value%identityAlignment
AT3G44450.1 unknown protein1.4e-1043.62Show/hide
Query:  LPIKPNSPLSPHLQHSDQT-THHHDLHTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREA
        LP +   P+SP   H  Q  T        +TV S    R+RLKRHR  VAG V IPD WGKE  L  W+D S F+A+   S I+ AR AL  ++
Subjt:  LPIKPNSPLSPHLQHSDQT-THHHDLHTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREA

AT3G52740.1 unknown protein9.9e-1760.32Show/hide
Query:  DTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREAKRSS
        DT RERLK+HR  +AG VWIP+ WG+EE LKDWID S F+  L P+GI  AR AL  EA+R++
Subjt:  DTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREAKRSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTCCCTATCAAACCCAACTCCCCATTATCGCCTCATCTCCAACACTCAGATCAAACCACTCACCATCACGACCTTCACACCTCCTCCACCGTCCCGTCCGATGA
CACCCCCCGAGAGAGGTTAAAGCGCCACCGTGTCGCTGTGGCCGGGCACGTTTGGATCCCTGACAAGTGGGGAAAAGAAGAGTTCTTGAAGGATTGGATCGACGGCTCTG
CATTTGAAGCCTCTTTGTTCCCCTCCGGGATCATGTTGGCTCGCCAGGCTTTGGCTCGAGAAGCTAAGAGATCGTCGCCGAATAACAACACCGCCACCGCCGCCACCACC
ACCACCACCGCCCCTGCTGCTGCTTCCGGAGATTTGAGATTATTAAACGGTTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTCTCCCTATCAAACCCAACTCCCCATTATCGCCTCATCTCCAACACTCAGATCAAACCACTCACCATCACGACCTTCACACCTCCTCCACCGTCCCGTCCGATGA
CACCCCCCGAGAGAGGTTAAAGCGCCACCGTGTCGCTGTGGCCGGGCACGTTTGGATCCCTGACAAGTGGGGAAAAGAAGAGTTCTTGAAGGATTGGATCGACGGCTCTG
CATTTGAAGCCTCTTTGTTCCCCTCCGGGATCATGTTGGCTCGCCAGGCTTTGGCTCGAGAAGCTAAGAGATCGTCGCCGAATAACAACACCGCCACCGCCGCCACCACC
ACCACCACCGCCCCTGCTGCTGCTTCCGGAGATTTGAGATTATTAAACGGTTGTTAA
Protein sequenceShow/hide protein sequence
MTLPIKPNSPLSPHLQHSDQTTHHHDLHTSSTVPSDDTPRERLKRHRVAVAGHVWIPDKWGKEEFLKDWIDGSAFEASLFPSGIMLARQALAREAKRSSPNNNTATAATT
TTTAPAAASGDLRLLNGC