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Carg10488 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10488
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionauxin-responsive protein SAUR50-like
Genome locationCarg_Chr03:8532501..8532896
RNA-Seq ExpressionCarg10488
SyntenyCarg10488
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604342.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]1.5e-67100Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMV
        MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMV
Subjt:  MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMV

Query:  PCSVSAFQEIVSAVECCNGRFDFGELVEEFL
        PCSVSAFQEIVSAVECCNGRFDFGELVEEFL
Subjt:  PCSVSAFQEIVSAVECCNGRFDFGELVEEFL

XP_022925979.1 auxin-induced protein 15A [Cucurbita moschata]4.5e-6799.24Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMV
        MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSP+STPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMV
Subjt:  MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMV

Query:  PCSVSAFQEIVSAVECCNGRFDFGELVEEFL
        PCSVSAFQEIVSAVECCNGRFDFGELVEEFL
Subjt:  PCSVSAFQEIVSAVECCNGRFDFGELVEEFL

XP_022972619.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]1.2e-5990.23Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQ--SPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNAL
        MLGKKMVSFKKLAKKVKVRVGTEGE+S+NE LLRD+LE  +DHDS   SPTSTPTGSFA+YVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNAL
Subjt:  MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQ--SPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNAL

Query:  MVPCSVSAFQEIVSAVECCNGRFDFGELVEEFL
        +VPCSVSAFQEIVSAVECCNGRFDFGE+VEEFL
Subjt:  MVPCSVSAFQEIVSAVECCNGRFDFGELVEEFL

XP_022977936.1 auxin-induced protein 15A-like [Cucurbita maxima]1.4e-6597.71Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMV
        MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSP++TPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMV
Subjt:  MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMV

Query:  PCSVSAFQEIVSAVECCNGRFDFGELVEEFL
        PCSVSAFQEIVSAVEC NGRFDFGELVEEFL
Subjt:  PCSVSAFQEIVSAVECCNGRFDFGELVEEFL

XP_038883394.1 auxin-responsive protein SAUR50 [Benincasa hispida]6.9e-6091.04Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDS---QSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA
        MLGKKMVSFKKLAKKVKVRVGTE EAS+NECLL D+LE  EDHDS    SPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA
Subjt:  MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDS---QSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA

Query:  LMVPCSVSAFQEIVSAVECCNGRFDFGELVEEFL
        L+VPCSVSAFQEIVSAVECCNGRFDFGE+VEEFL
Subjt:  LMVPCSVSAFQEIVSAVECCNGRFDFGELVEEFL

TrEMBL top hitse value%identityAlignment
A0A0A0KEY4 Uncharacterized protein2.2e-5686.67Show/hide
Query:  MLGKKMVSFKKLAKKVK-VRVGTEGEASYNECLLRDQLEPPEDHDS---QSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN
        ML KKMVSFKKLAKKVK VRVGTE E S+NECLL D+ E P DHDS    SPTSTPTGSFAIYVG+ERQRFVVPTSFLSHPLFRM+LDKAYREFGFEQRN
Subjt:  MLGKKMVSFKKLAKKVK-VRVGTEGEASYNECLLRDQLEPPEDHDS---QSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN

Query:  ALMVPCSVSAFQEIVSAVECCNGRFDFGELVEEFL
        AL+VPCSVSAFQEIVSAVECCNGRFDFGE+VEEFL
Subjt:  ALMVPCSVSAFQEIVSAVECCNGRFDFGELVEEFL

A0A6J1EDQ2 auxin-induced protein 15A2.2e-6799.24Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMV
        MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSP+STPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMV
Subjt:  MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMV

Query:  PCSVSAFQEIVSAVECCNGRFDFGELVEEFL
        PCSVSAFQEIVSAVECCNGRFDFGELVEEFL
Subjt:  PCSVSAFQEIVSAVECCNGRFDFGELVEEFL

A0A6J1HIA1 auxin-induced protein 6B-like1.3e-5988.97Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTEGE-ASYNECLLRDQLEPPEDHDSQ----SPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQR
        MLGKKMVSFKKLAKKVKVRVGTEGE +S+NECLLRD+LE  +DHDS     SPTSTPTGSFA+YVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQR
Subjt:  MLGKKMVSFKKLAKKVKVRVGTEGE-ASYNECLLRDQLEPPEDHDSQ----SPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQR

Query:  NALMVPCSVSAFQEIVSAVECCNGRFDFGELVEEFL
        NAL+VPCSVSAFQEIVSAVECCNGRFDFGE+VEEFL
Subjt:  NALMVPCSVSAFQEIVSAVECCNGRFDFGELVEEFL

A0A6J1IC38 auxin-responsive protein SAUR50-like5.7e-6090.23Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQ--SPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNAL
        MLGKKMVSFKKLAKKVKVRVGTEGE+S+NE LLRD+LE  +DHDS   SPTSTPTGSFA+YVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNAL
Subjt:  MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQ--SPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNAL

Query:  MVPCSVSAFQEIVSAVECCNGRFDFGELVEEFL
        +VPCSVSAFQEIVSAVECCNGRFDFGE+VEEFL
Subjt:  MVPCSVSAFQEIVSAVECCNGRFDFGELVEEFL

A0A6J1ILC7 auxin-induced protein 15A-like7.0e-6697.71Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMV
        MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSP++TPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMV
Subjt:  MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMV

Query:  PCSVSAFQEIVSAVECCNGRFDFGELVEEFL
        PCSVSAFQEIVSAVEC NGRFDFGELVEEFL
Subjt:  PCSVSAFQEIVSAVECCNGRFDFGELVEEFL

SwissProt top hitse value%identityAlignment
O64538 Auxin-responsive protein SAUR401.2e-0936.36Show/hide
Query:  TSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAV
        +S P+G   + VG++++RFVV    L+HP+F  LL+++ +E+G+ Q+  L +PC+V  F+++V ++
Subjt:  TSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAV

O65695 Auxin-responsive protein SAUR504.3e-1244.78Show/hide
Query:  PTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAV
        P   P G F +YVG+ R R++VP SFL+HP F+ LL +A  EFGF+    L +PC    FQ + S +
Subjt:  PTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAV

P0DKL1 Auxin-responsive protein SAUR506.8e-1039.44Show/hide
Query:  DSQSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAV
        DS  P   P G F +YVG+ R R++VP S L HP F+ LL ++  EFGF     +++PC    F    S +
Subjt:  DSQSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAV

Q9LTV3 Auxin-responsive protein SAUR723.6e-1142.42Show/hide
Query:  TSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAV
        +S P G   +YVGDE +RFVV    L+HP+F  LL+++ +E+G+EQ+  L +PC V  F+ I+ ++
Subjt:  TSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAV

Q9SA49 Auxin-responsive protein SAUR411.2e-0934.52Show/hide
Query:  STPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVEC--CNGRFDFGELVEEFL
        + P G   +YVG+E +RFVV    ++HP+F  LL+++ +E+G+ Q+  L +PC V  F+ +V  +      G  D   LV   L
Subjt:  STPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVEC--CNGRFDFGELVEEFL

Arabidopsis top hitse value%identityAlignment
AT2G36210.1 SAUR-like auxin-responsive protein family4.4e-3657.55Show/hide
Query:  MLGKKMVSFKKLAKKVK-----VRVGTEG--EASYNECLLRDQLEPPEDHDSQSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREF-GF
        MLGK++ SFK LAKK+K      R G EG  E++YNE LL ++     D  +   + TPTG+FA+YVG+ER + VVPTS+L+HPLFRMLLDK++ EF  F
Subjt:  MLGKKMVSFKKLAKKVK-----VRVGTEG--EASYNECLLRDQLEPPEDHDSQSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREF-GF

Query:  EQRNALMVPCSVSAFQEIVSAVECCNGRFDFGELVEEFL
        EQ+  L+VPCS+S FQ++V+AVE CNG FDFGE VEEFL
Subjt:  EQRNALMVPCSVSAFQEIVSAVECCNGRFDFGELVEEFL

AT3G43120.1 SAUR-like auxin-responsive protein family1.5e-1545.71Show/hide
Query:  QSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVE
        + P   P G  A+YVG E +RF++PT+FLSH LF++LL+KA  E+GF+   AL +PC V  F+ ++  +E
Subjt:  QSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVE

AT5G20810.1 SAUR-like auxin-responsive protein family6.5e-1638.05Show/hide
Query:  GKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPC
        GK+ V+    A   ++     G++    C      EPP D         P G+ A+YVG E +RF++PTS+LSH LF++LL+KA  EFGF+Q  AL +PC
Subjt:  GKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPC

Query:  SVSAFQEIVSAVE
         V  F+ ++  +E
Subjt:  SVSAFQEIVSAVE

AT5G20810.2 SAUR-like auxin-responsive protein family6.5e-1638.05Show/hide
Query:  GKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPC
        GK+ V+    A   ++     G++    C      EPP D         P G+ A+YVG E +RF++PTS+LSH LF++LL+KA  EFGF+Q  AL +PC
Subjt:  GKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPC

Query:  SVSAFQEIVSAVE
         V  F+ ++  +E
Subjt:  SVSAFQEIVSAVE

AT5G66260.1 SAUR-like auxin-responsive protein family1.4e-1347.62Show/hide
Query:  PTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAV
        P G F +YVG  R R V+P SFL+HP+F+MLL ++  EFGF Q N L +PC    F+ ++S++
Subjt:  PTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAGGCAAGAAAATGGTTTCCTTCAAGAAACTCGCCAAGAAAGTGAAGGTCCGAGTCGGGACGGAGGGTGAAGCATCGTACAACGAATGTTTGCTCAGAGATCAATT
GGAACCACCGGAGGATCACGATTCTCAGTCACCTACGTCGACTCCGACTGGCTCGTTCGCGATTTACGTCGGCGATGAACGGCAGCGCTTCGTTGTACCGACGAGCTTCT
TGTCGCATCCGCTCTTTAGGATGCTGCTCGATAAAGCGTACAGAGAGTTCGGATTCGAGCAGAGGAATGCGCTTATGGTTCCTTGTAGCGTCTCTGCTTTTCAAGAAATT
GTGAGCGCTGTCGAATGCTGCAATGGTAGATTCGATTTCGGCGAGCTTGTTGAGGAGTTTTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTAGGCAAGAAAATGGTTTCCTTCAAGAAACTCGCCAAGAAAGTGAAGGTCCGAGTCGGGACGGAGGGTGAAGCATCGTACAACGAATGTTTGCTCAGAGATCAATT
GGAACCACCGGAGGATCACGATTCTCAGTCACCTACGTCGACTCCGACTGGCTCGTTCGCGATTTACGTCGGCGATGAACGGCAGCGCTTCGTTGTACCGACGAGCTTCT
TGTCGCATCCGCTCTTTAGGATGCTGCTCGATAAAGCGTACAGAGAGTTCGGATTCGAGCAGAGGAATGCGCTTATGGTTCCTTGTAGCGTCTCTGCTTTTCAAGAAATT
GTGAGCGCTGTCGAATGCTGCAATGGTAGATTCGATTTCGGCGAGCTTGTTGAGGAGTTTTTGTAG
Protein sequenceShow/hide protein sequence
MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEI
VSAVECCNGRFDFGELVEEFL