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Carg10499 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10499
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein trichome birefringence-like 8
Genome locationCarg_Chr03:8473692..8474876
RNA-Seq ExpressionCarg10499
SyntenyCarg10499
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025234.1 protein trichome birefringence-like 8 [Cucumis melo var. makuwa]1.2e-1776.12Show/hide
Query:  CSSRKEA----TKPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNRGPDTPDEA
        C++ KE     TK EDEPENNIFISNVIKQMD+VKHK+Q LNITYLTEFRKD HPSKNR P TPD+A
Subjt:  CSSRKEA----TKPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNRGPDTPDEA
KAG6604332.1 hypothetical protein SDJN03_04941, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2443.68Show/hide
Query:  MENGFGMRLMHSTLTPRIAPSLILDSGASKMAGMMTVTGSGSGRRTAAISRERFKSFRKIDSTLQNTKRLLFLRRGETEYGCNGSILWVATDIEAMGGGT
        MENGFGMRLMHSTLTPRIAPSLILDSGASKMAGMMTVTGSGSGRRTAAISR                                                 
Subjt:  MENGFGMRLMHSTLTPRIAPSLILDSGASKMAGMMTVTGSGSGRRTAAISRERFKSFRKIDSTLQNTKRLLFLRRGETEYGCNGSILWVATDIEAMGGGT

Query:  FGSKLNSSFLSRVFSCSSRKEATKPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNRGPDTPDEASLVPAWNTRYEE
                                                                  EFRKDEHPSKNRGPDTPDEASLVPAWNTRYEE
Subjt:  FGSKLNSSFLSRVFSCSSRKEATKPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNRGPDTPDEASLVPAWNTRYEE
KAG7034482.1 Protein trichome birefringence-like 8, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-101100Show/hide
Query:  MENGFGMRLMHSTLTPRIAPSLILDSGASKMAGMMTVTGSGSGRRTAAISRERFKSFRKIDSTLQNTKRLLFLRRGETEYGCNGSILWVATDIEAMGGGT
        MENGFGMRLMHSTLTPRIAPSLILDSGASKMAGMMTVTGSGSGRRTAAISRERFKSFRKIDSTLQNTKRLLFLRRGETEYGCNGSILWVATDIEAMGGGT
Subjt:  MENGFGMRLMHSTLTPRIAPSLILDSGASKMAGMMTVTGSGSGRRTAAISRERFKSFRKIDSTLQNTKRLLFLRRGETEYGCNGSILWVATDIEAMGGGT

Query:  FGSKLNSSFLSRVFSCSSRKEATKPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNRGPDTPDEASLVPAWNTRYEE
        FGSKLNSSFLSRVFSCSSRKEATKPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNRGPDTPDEASLVPAWNTRYEE
Subjt:  FGSKLNSSFLSRVFSCSSRKEATKPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNRGPDTPDEASLVPAWNTRYEE
KGN48564.2 hypothetical protein Csa_003393 [Cucumis sativus]2.5e-1860.2Show/hide
Query:  SILWVATDIEAMGGGTFGSKLNSSFLSRVFSCSSRKEA----TKPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNRGPDTPDEA
        S +  A D+E   GGT+         S    C++ KE     TK EDEPENNIFISNVIKQMDSVK+K+Q LNITYLTEFRKD HPSKNR P TPD+A
Subjt:  SILWVATDIEAMGGGTFGSKLNSSFLSRVFSCSSRKEA----TKPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNRGPDTPDEA
XP_022979173.1 uncharacterized protein LOC111478892 [Cucurbita maxima]6.1e-3363.57Show/hide
Query:  MENGFGMRLMHSTLTPRIAPSLILDSGASKMAGMMTVTGSGSGRRTAAISRERFKSFRKIDSTLQNTKRLLFLRRGETEYGCNGSILWVATDIEAMGGGT
        ME+GFGMRL+HSTLTPRIAPSLILDSGA KM GMMTVT + +                  D  L+  +RLLF RRGE EYGCNGSI WVATDIEA+GGGT
Subjt:  MENGFGMRLMHSTLTPRIAPSLILDSGASKMAGMMTVTGSGSGRRTAAISRERFKSFRKIDSTLQNTKRLLFLRRGETEYGCNGSILWVATDIEAMGGGT

Query:  FGSKLNSSFLSRVFSCSSRKEATKPEDEP
        FGSKLN SFLS+ FSCS R   +   DEP
Subjt:  FGSKLNSSFLSRVFSCSSRKEATKPEDEP
TrEMBL top hitse value%identityAlignment
A0A0A0KHJ0 PMR5N domain-containing protein1.3e-1776.12Show/hide
Query:  CSSRKEA----TKPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNRGPDTPDEA
        C++ KE     TK EDEPENNIFISNVIKQMDSVK+K+Q LNITYLTEFRKD HPSKNR P TPD+A
Subjt:  CSSRKEA----TKPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNRGPDTPDEA
A0A1S3CHA4 protein trichome birefringence-like 86.0e-1876.12Show/hide
Query:  CSSRKEA----TKPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNRGPDTPDEA
        C++ KE     TK EDEPENNIFISNVIKQMD+VKHK+Q LNITYLTEFRKD HPSKNR P TPD+A
Subjt:  CSSRKEA----TKPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNRGPDTPDEA
A0A5A7SHX5 Protein trichome birefringence-like 86.0e-1876.12Show/hide
Query:  CSSRKEA----TKPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNRGPDTPDEA
        C++ KE     TK EDEPENNIFISNVIKQMD+VKHK+Q LNITYLTEFRKD HPSKNR P TPD+A
Subjt:  CSSRKEA----TKPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNRGPDTPDEA
A0A6J1BTW5 protein trichome birefringence-like 81.1e-1474.58Show/hide
Query:  KEATKPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNRGPDTPDEA
        ++ T+ EDEPE N FISN IKQMDSVKHKVQ LNITYLTEFRKD HPSK R P TP++A
Subjt:  KEATKPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNRGPDTPDEA
A0A6J1IVD0 uncharacterized protein LOC1114788923.0e-3363.57Show/hide
Query:  MENGFGMRLMHSTLTPRIAPSLILDSGASKMAGMMTVTGSGSGRRTAAISRERFKSFRKIDSTLQNTKRLLFLRRGETEYGCNGSILWVATDIEAMGGGT
        ME+GFGMRL+HSTLTPRIAPSLILDSGA KM GMMTVT + +                  D  L+  +RLLF RRGE EYGCNGSI WVATDIEA+GGGT
Subjt:  MENGFGMRLMHSTLTPRIAPSLILDSGASKMAGMMTVTGSGSGRRTAAISRERFKSFRKIDSTLQNTKRLLFLRRGETEYGCNGSILWVATDIEAMGGGT

Query:  FGSKLNSSFLSRVFSCSSRKEATKPEDEP
        FGSKLN SFLS+ FSCS R   +   DEP
Subjt:  FGSKLNSSFLSRVFSCSSRKEATKPEDEP
SwissProt top hitse value%identityAlignment
Q9CAX1 Protein trichome birefringence-like 83.2e-0854.55Show/hide
Query:  KPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNRGPDTPDEA
        K E +P +N +IS  I++M     KV+ LNITYLTEFRKD HPS+ R P TP++A
Subjt:  KPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNRGPDTPDEA
Arabidopsis top hitse value%identityAlignment
AT3G11570.1 TRICHOME BIREFRINGENCE-LIKE 82.3e-0954.55Show/hide
Query:  KPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNRGPDTPDEA
        K E +P +N +IS  I++M     KV+ LNITYLTEFRKD HPS+ R P TP++A
Subjt:  KPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNRGPDTPDEA
AT5G06230.1 TRICHOME BIREFRINGENCE-LIKE 91.7e-0445Show/hide
Query:  KPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNR----GPDTPDEAS
        K E +  +N +I  VI++M     KV+ LNITYLTEFRKD H S+ R      D P + S
Subjt:  KPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNR----GPDTPDEAS
AT5G06230.2 TRICHOME BIREFRINGENCE-LIKE 91.7e-0445Show/hide
Query:  KPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNR----GPDTPDEAS
        K E +  +N +I  VI++M     KV+ LNITYLTEFRKD H S+ R      D P + S
Subjt:  KPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNR----GPDTPDEAS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATGGGTTTGGGATGAGACTTATGCATTCCACTCTTACGCCGAGAATTGCCCCTTCGCTGATCCTGGATTCCGGTGCGTCCAAAATGGCGGGAATGATGACGGT
TACCGGAAGCGGTAGCGGCAGACGGACGGCAGCGATATCCCGAGAGAGATTCAAATCGTTTAGGAAAATTGATAGCACTCTTCAGAACACTAAGAGGTTACTATTTCTAA
GAAGAGGAGAGACTGAATATGGATGTAATGGAAGCATTTTGTGGGTCGCTACAGACATCGAAGCGATGGGTGGAGGAACATTTGGATCCAAACTGAACTCGAGTTTTCTT
TCAAGGGTATTCTCCTGTTCATCAAGGAAAGAGGCTACAAAGCCGGAAGATGAGCCAGAAAACAATATTTTCATTTCAAATGTAATAAAACAAATGGATTCTGTAAAACA
TAAAGTTCAGGTATTGAATATTACATATCTAACAGAGTTCAGAAAGGATGAACACCCTTCAAAGAATCGTGGGCCCGACACGCCAGATGAAGCTTCACTGGTGCCTGCCT
GGAATACCAGATACGAGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATGGGTTTGGGATGAGACTTATGCATTCCACTCTTACGCCGAGAATTGCCCCTTCGCTGATCCTGGATTCCGGTGCGTCCAAAATGGCGGGAATGATGACGGT
TACCGGAAGCGGTAGCGGCAGACGGACGGCAGCGATATCCCGAGAGAGATTCAAATCGTTTAGGAAAATTGATAGCACTCTTCAGAACACTAAGAGGTTACTATTTCTAA
GAAGAGGAGAGACTGAATATGGATGTAATGGAAGCATTTTGTGGGTCGCTACAGACATCGAAGCGATGGGTGGAGGAACATTTGGATCCAAACTGAACTCGAGTTTTCTT
TCAAGGGTATTCTCCTGTTCATCAAGGAAAGAGGCTACAAAGCCGGAAGATGAGCCAGAAAACAATATTTTCATTTCAAATGTAATAAAACAAATGGATTCTGTAAAACA
TAAAGTTCAGGTATTGAATATTACATATCTAACAGAGTTCAGAAAGGATGAACACCCTTCAAAGAATCGTGGGCCCGACACGCCAGATGAAGCTTCACTGGTGCCTGCCT
GGAATACCAGATACGAGGAATAA
Protein sequenceShow/hide protein sequence
MENGFGMRLMHSTLTPRIAPSLILDSGASKMAGMMTVTGSGSGRRTAAISRERFKSFRKIDSTLQNTKRLLFLRRGETEYGCNGSILWVATDIEAMGGGTFGSKLNSSFL
SRVFSCSSRKEATKPEDEPENNIFISNVIKQMDSVKHKVQVLNITYLTEFRKDEHPSKNRGPDTPDEASLVPAWNTRYEE