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Carg10547 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10547
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr03:7542894..7543826
RNA-Seq ExpressionCarg10547
SyntenyCarg10547
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027135.1 hypothetical protein SDJN02_11146, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-1183.67Show/hide
Query:  GAFSDTLSASLFAFPLYIAISRRAQSGCRSTTTARGFCLSDRAALVCRS
        GAFSD LSAS   FPLYIAISRR QSGCRSTTTA G CLS+RAALVCRS
Subjt:  GAFSDTLSASLFAFPLYIAISRRAQSGCRSTTTARGFCLSDRAALVCRS
KAG7034433.1 hypothetical protein SDJN02_04162, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-34100Show/hide
Query:  MWLVAVAEGAFSDTLSASLFAFPLYIAISRRAQSGCRSTTTARGFCLSDRAALVCRSCAYNFKHRSRGPFSLGYNN
        MWLVAVAEGAFSDTLSASLFAFPLYIAISRRAQSGCRSTTTARGFCLSDRAALVCRSCAYNFKHRSRGPFSLGYNN
Subjt:  MWLVAVAEGAFSDTLSASLFAFPLYIAISRRAQSGCRSTTTARGFCLSDRAALVCRSCAYNFKHRSRGPFSLGYNN
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCTTGTGGCTGTTGCAGAGGGAGCTTTCTCAGACACTCTGTCTGCTTCTCTTTTCGCCTTTCCTCTTTATATTGCTATAAGTAGGCGAGCACAGAGTGGCTGCAG
AAGCACAACAACAGCCAGAGGCTTCTGCTTATCGGACCGCGCCGCTCTTGTTTGTCGCTCGTGCGCTTACAATTTCAAACACAGATCTCGAGGCCCTTTTAGTCTTGGCT
ATAACAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGCTTGTGGCTGTTGCAGAGGGAGCTTTCTCAGACACTCTGTCTGCTTCTCTTTTCGCCTTTCCTCTTTATATTGCTATAAGTAGGCGAGCACAGAGTGGCTGCAG
AAGCACAACAACAGCCAGAGGCTTCTGCTTATCGGACCGCGCCGCTCTTGTTTGTCGCTCGTGCGCTTACAATTTCAAACACAGATCTCGAGGCCCTTTTAGTCTTGGCT
ATAACAACTGACATCTGTTTTGCTTTTACACCATTTTTTTTGTTCCTTCCCCCGCCATTTTCTCTTATTTATTTAGAGGCCAATCTTCCTCCTCCGTTGGGTTTGAGCTC
AATACAAAGCACTTGGATTAGTTTTTTTTGGGTTTGTTTTATACTTTGCTCAAAGGCGTGGGGATTGACTCTTGAGAAGTTGCATCAGCCATAATCTTAGCCGGGTCGGT
GACACTCTGTTGAATATTGCTGTTGCTTTGCAGTGATCTCGAGGTATAGCCTTCGAACCTTGCTTCCTTGGGCTGTGTTTCCTGTATTTGATTATTCCAATCACTTCCTT
TTGTTTTGT
Protein sequenceShow/hide protein sequence
MWLVAVAEGAFSDTLSASLFAFPLYIAISRRAQSGCRSTTTARGFCLSDRAALVCRSCAYNFKHRSRGPFSLGYNN