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Carg10549 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10549
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein IDA-LIKE 2
Genome locationCarg_Chr03:7524180..7524437
RNA-Seq ExpressionCarg10549
SyntenyCarg10549
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4283463.1 unnamed protein product [Prunus armeniaca]3.7e-1460.53Show/hide
Query:  TRKLAWMLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPHSYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP
        +R+   +LLV L +        N + ++ A  FKLKPK  HS GHF GFLPRRIPIPASGPSRKHNDIGLRSWR+P
Subjt:  TRKLAWMLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPHSYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP

KAB1210294.1 Protein IDA-LIKE 2 [Morella rubra]1.4e-1356.79Show/hide
Query:  VGGGRTRKLAWMLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPHSYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP
        VG G   +L W+L  +L   G     C+G  T +   FKL+PK  +S GHF GFLPRRIPIP SGPSRKHNDIGL+SWR+P
Subjt:  VGGGRTRKLAWMLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPHSYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP

KAE8647464.1 hypothetical protein Csa_004278 [Cucumis sativus]2.8e-1755.21Show/hide
Query:  RTRKLAWM--LLVMLLMNGE---LLICCNG------------YPTKHALFFKLKPKKPHS--YGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP
        R + ++WM  L++MLLMN E   L+ICCN                + +   KLKPK  ++  YGHFFGFLPRRIPIPASGPSRKHNDIGLRSWR+P
Subjt:  RTRKLAWM--LLVMLLMNGE---LLICCNG------------YPTKHALFFKLKPKKPHS--YGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP

KAG7034431.1 Protein IDA-LIKE 2, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-43100Show/hide
Query:  MIVFVGGGRTRKLAWMLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPHSYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP
        MIVFVGGGRTRKLAWMLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPHSYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP
Subjt:  MIVFVGGGRTRKLAWMLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPHSYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP

ONI01802.1 hypothetical protein PRUPE_6G159700 [Prunus persica]8.3e-1464.29Show/hide
Query:  MLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPHSYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP
        +LLV L +        N + ++ A  FKLKPK  HS GHF GFLPRRIPIPASGPSRKHNDIGLRSWR+P
Subjt:  MLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPHSYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP

TrEMBL top hitse value%identityAlignment
A0A0A0KFQ3 Uncharacterized protein1.5e-1657.47Show/hide
Query:  MLLVMLLMNGE---LLICCNG------------YPTKHALFFKLKPKKPHS--YGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP
        +L++MLLMN E   L+ICCN                + +   KLKPK  ++  YGHFFGFLPRRIPIPASGPSRKHNDIGLRSWR+P
Subjt:  MLLVMLLMNGE---LLICCNG------------YPTKHALFFKLKPKKPHS--YGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP

A0A6A1VC18 Protein IDA-LIKE 26.9e-1456.79Show/hide
Query:  VGGGRTRKLAWMLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPHSYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP
        VG G   +L W+L  +L   G     C+G  T +   FKL+PK  +S GHF GFLPRRIPIP SGPSRKHNDIGL+SWR+P
Subjt:  VGGGRTRKLAWMLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPHSYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP

A0A6J5V5G9 Uncharacterized protein1.8e-1460.53Show/hide
Query:  TRKLAWMLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPHSYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP
        +R+   +LLV L +        N + ++ A  FKLKPK  HS GHF GFLPRRIPIPASGPSRKHNDIGLRSWR+P
Subjt:  TRKLAWMLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPHSYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP

A0A7N2LYR6 Uncharacterized protein1.2e-1356.76Show/hide
Query:  KLAWMLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPHSYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP
        +L W+ L+++ + G     C+G  ++    FK KPK  +S GHF GFLPRRIPIPASGPSRKHNDIGL+SWR+P
Subjt:  KLAWMLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPHSYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP

M5W2Q5 Uncharacterized protein4.0e-1464.29Show/hide
Query:  MLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPHSYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP
        +LLV L +        N + ++ A  FKLKPK  HS GHF GFLPRRIPIPASGPSRKHNDIGLRSWR+P
Subjt:  MLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPHSYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP

SwissProt top hitse value%identityAlignment
Q6DUW6 Protein IDA-LIKE 43.2e-0840Show/hide
Query:  RKLAWMLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPHS-----YGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP
        R  A++LL++ L     +  C+      +  F   P   HS      GHF GFLPR +P+PAS PSRKHNDIG+++  +P
Subjt:  RKLAWMLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPHS-----YGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP

Q6DUW7 Protein IDA-LIKE 35.4e-0843.21Show/hide
Query:  LLVMLLMNGELLICCNGYPTKHALFFKLKPKK------PHSYGH----------FFGFLPRRIPIPASGPSRKHNDIGLRS
        +LV+LL+   LL CCNG  T +       PK+      PH + H          F G LPR+ P+P SGPSRKHN+IGL S
Subjt:  LLVMLLMNGELLICCNGYPTKHALFFKLKPKK------PHSYGH----------FFGFLPRRIPIPASGPSRKHNDIGLRS

Q6DUW8 Protein IDA-LIKE 52.8e-0431.91Show/hide
Query:  GGRTRKLAWMLLVMLLMNGELLIC------CNGYPTKHALFFKLKPKKPHSYGH--------------FFGFLPRRIPIPASGPSRKHNDIGLR
        G +  K   +L+VM++M     IC           ++   FFK++   P ++ H              F GFLP+ +PIP S PSRKHN  GL+
Subjt:  GGRTRKLAWMLLVMLLMNGELLIC------CNGYPTKHALFFKLKPKKPHSYGH--------------FFGFLPRRIPIPASGPSRKHNDIGLR

Q6DUW9 Protein IDA-LIKE 25.8e-1050.68Show/hide
Query:  MLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPH------SYGHFFGFLPRRIPIPASGPSRKHNDIGLRSW
        +LL+++L+ G     CNG  T +   F  KP K H      S   F GFLPR  P+PASGPSRKHNDIGL SW
Subjt:  MLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPH------SYGHFFGFLPRRIPIPASGPSRKHNDIGLRSW

Arabidopsis top hitse value%identityAlignment
AT1G76952.1 inflorescence deficient in abscission (IDA)-like 52.0e-0531.91Show/hide
Query:  GGRTRKLAWMLLVMLLMNGELLIC------CNGYPTKHALFFKLKPKKPHSYGH--------------FFGFLPRRIPIPASGPSRKHNDIGLR
        G +  K   +L+VM++M     IC           ++   FFK++   P ++ H              F GFLP+ +PIP S PSRKHN  GL+
Subjt:  GGRTRKLAWMLLVMLLMNGELLIC------CNGYPTKHALFFKLKPKKPHSYGH--------------FFGFLPRRIPIPASGPSRKHNDIGLR

AT3G18715.1 inflorescence deficient in abscission (IDA)-like 42.3e-0940Show/hide
Query:  RKLAWMLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPHS-----YGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP
        R  A++LL++ L     +  C+      +  F   P   HS      GHF GFLPR +P+PAS PSRKHNDIG+++  +P
Subjt:  RKLAWMLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPHS-----YGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP

AT5G09805.1 inflorescence deficient in abscission (IDA)-like 33.8e-0943.21Show/hide
Query:  LLVMLLMNGELLICCNGYPTKHALFFKLKPKK------PHSYGH----------FFGFLPRRIPIPASGPSRKHNDIGLRS
        +LV+LL+   LL CCNG  T +       PK+      PH + H          F G LPR+ P+P SGPSRKHN+IGL S
Subjt:  LLVMLLMNGELLICCNGYPTKHALFFKLKPKK------PHSYGH----------FFGFLPRRIPIPASGPSRKHNDIGLRS

AT5G64667.1 inflorescence deficient in abscission (IDA)-like 24.1e-1150.68Show/hide
Query:  MLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPH------SYGHFFGFLPRRIPIPASGPSRKHNDIGLRSW
        +LL+++L+ G     CNG  T +   F  KP K H      S   F GFLPR  P+PASGPSRKHNDIGL SW
Subjt:  MLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPH------SYGHFFGFLPRRIPIPASGPSRKHNDIGLRSW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGTGTTCGTGGGTGGAGGAAGAACAAGGAAGCTTGCTTGGATGTTATTGGTGATGTTGTTGATGAACGGGGAGCTACTCATATGCTGCAATGGGTACCCAACCAA
GCACGCCTTGTTCTTCAAGTTGAAGCCCAAAAAGCCTCATTCATACGGCCATTTCTTCGGATTCTTGCCCAGAAGAATACCCATTCCGGCCTCTGGTCCTTCCAGGAAAC
ACAACGATATTGGATTAAGAAGCTGGAGAGCGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCGTGTTCGTGGGTGGAGGAAGAACAAGGAAGCTTGCTTGGATGTTATTGGTGATGTTGTTGATGAACGGGGAGCTACTCATATGCTGCAATGGGTACCCAACCAA
GCACGCCTTGTTCTTCAAGTTGAAGCCCAAAAAGCCTCATTCATACGGCCATTTCTTCGGATTCTTGCCCAGAAGAATACCCATTCCGGCCTCTGGTCCTTCCAGGAAAC
ACAACGATATTGGATTAAGAAGCTGGAGAGCGCCTTGA
Protein sequenceShow/hide protein sequence
MIVFVGGGRTRKLAWMLLVMLLMNGELLICCNGYPTKHALFFKLKPKKPHSYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRAP