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Carg10555 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10555
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionpollen-specific leucine-rich repeat extensin-like protein 1
Genome locationCarg_Chr03:7483753..7484513
RNA-Seq ExpressionCarg10555
SyntenyCarg10555
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604268.1 hypothetical protein SDJN03_04877, partial [Cucurbita argyrosperma subsp. sororia]1.6e-8698.9Show/hide
Query:  MGACATKPKVLKPDSGDAPAPDPAPEPSPEKTVPETKLENGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP
        MGACATKPKVLKPDSGDAPAP PAPEPSPEKTVPETKLENGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP
Subjt:  MGACATKPKVLKPDSGDAPAPDPAPEPSPEKTVPETKLENGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP

Query:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN
        SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDEN PPPEKTESPEKPTETEEPVIKVISN
Subjt:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN

KAG7034425.1 hypothetical protein SDJN02_04154 [Cucurbita argyrosperma subsp. argyrosperma]3.7e-88100Show/hide
Query:  MGACATKPKVLKPDSGDAPAPDPAPEPSPEKTVPETKLENGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP
        MGACATKPKVLKPDSGDAPAPDPAPEPSPEKTVPETKLENGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP
Subjt:  MGACATKPKVLKPDSGDAPAPDPAPEPSPEKTVPETKLENGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP

Query:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN
        SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN
Subjt:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN

XP_022949635.1 pollen-specific leucine-rich repeat extensin-like protein 1 [Cucurbita moschata]1.2e-8698.9Show/hide
Query:  MGACATKPKVLKPDSGDAPAPDPAPEPSPEKTVPETKLENGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP
        MGACATKPKVLKPDSGDAPAP PAPEPSPEKTVPETKLE+GTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP
Subjt:  MGACATKPKVLKPDSGDAPAPDPAPEPSPEKTVPETKLENGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP

Query:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN
        SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN
Subjt:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN

XP_022979013.1 early nodulin-75-like [Cucurbita maxima]5.6e-7691.16Show/hide
Query:  MGACATKPKVLKPDSGDAPAPDPAPEPSPEKTVPETKLENGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP
        MGACATKPKVLK DSG+APAP PAPE SPEKTV ETKLENG+S AQGTEIVDEDKV SKPRCLSHLF+DQEKTAAADPSEKEEIP E+EKKMNPPPEEKP
Subjt:  MGACATKPKVLKPDSGDAPAPDPAPEPSPEKTVPETKLENGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP

Query:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN
        SETIPPETEKKINPPTEEKP ETNPPEPEPPVSDSVTENA PIESN KVEV DEN+PPPEKTESPEKPTETEEPVIKVISN
Subjt:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN

XP_023543402.1 early nodulin-75-like [Cucurbita pepo subsp. pepo]3.2e-7993.37Show/hide
Query:  MGACATKPKVLKPDSGDAPAPDPAPEPSPEKTVPETKLENGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP
        MGACATKPKVLK DSGDAPAP PAPE S EKTVPETKLENG+SDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPS KEEIPPE+EKKMNPPPEEKP
Subjt:  MGACATKPKVLKPDSGDAPAPDPAPEPSPEKTVPETKLENGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP

Query:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN
        SETIPPETEKKINPPTE+KPSETNPPEPEPPVSDSVTENA PIESN KVEV DEN+PPPEKTESPEKPTETEEPVIKVISN
Subjt:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN

TrEMBL top hitse value%identityAlignment
A0A0A0KFS6 Uncharacterized protein1.1e-2150.81Show/hide
Query:  MGACATKPKVLKPDSGDAPAPDPAPEPSPEKTVPETKLENGTSDAQGTEIVDEDKVDSKPRCLSHLF-----NDQEKTAAADPSEKEEIPPESEKKMNPP
        MGACATKPK LK +SGDAP   PA          ETK ++   +     +VD+DKVDSKP  L+ LF      ++EKT  ADP EK+             
Subjt:  MGACATKPKVLKPDSGDAPAPDPAPEPSPEKTVPETKLENGTSDAQGTEIVDEDKVDSKPRCLSHLF-----NDQEKTAAADPSEKEEIPPESEKKMNPP

Query:  PEEKPSETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESN-----IKVEVPDENKPPPEKTESPEKPTETEEPV
              ET PPETEK+INP  EEKPSE NP  PEP VSDSVTEN    E       IKVEV  EN  PPEKTES EKPTETE+ V
Subjt:  PEEKPSETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESN-----IKVEVPDENKPPPEKTESPEKPTETEEPV

A0A1S3B2G7 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X11.5e-2147.57Show/hide
Query:  MGACATKPKVLKPDSGDAPAPDPAPEPSPEKTVPETKLENGTSDAQGTEIVDEDKVDSKPRCLSHLFND------QEKTAAADPSEKEEIPPESEKKMNP
        MGACATKPK +K +SG+AP   PA          ETK ++   +     +VD+DKVDSKPR LS+LF D      +EKT  ADP EK+            
Subjt:  MGACATKPKVLKPDSGDAPAPDPAPEPSPEKTVPETKLENGTSDAQGTEIVDEDKVDSKPRCLSHLFND------QEKTAAADPSEKEEIPPESEKKMNP

Query:  PPEEKPSETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPI--------------------ESNIKVEVPDENKPPPEKTESPEKPTETEEP
               ET PPETEK+I+P  EEKPSE NP  PEP VSDSVTEN   I                    E  IKVEV  EN  PPEKTES EKPTETE+ 
Subjt:  PPEEKPSETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPI--------------------ESNIKVEVPDENKPPPEKTESPEKPTETEEP

Query:  VIKVIS
        V KVI+
Subjt:  VIKVIS

A0A5A7SHD6 Pollen-specific leucine-rich repeat extensin-like protein 1 isoform X11.5e-2147.57Show/hide
Query:  MGACATKPKVLKPDSGDAPAPDPAPEPSPEKTVPETKLENGTSDAQGTEIVDEDKVDSKPRCLSHLFND------QEKTAAADPSEKEEIPPESEKKMNP
        MGACATKPK +K +SG+AP   PA          ETK ++   +     +VD+DKVDSKPR LS+LF D      +EKT  ADP EK+            
Subjt:  MGACATKPKVLKPDSGDAPAPDPAPEPSPEKTVPETKLENGTSDAQGTEIVDEDKVDSKPRCLSHLFND------QEKTAAADPSEKEEIPPESEKKMNP

Query:  PPEEKPSETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPI--------------------ESNIKVEVPDENKPPPEKTESPEKPTETEEP
               ET PPETEK+I+P  EEKPSE NP  PEP VSDSVTEN   I                    E  IKVEV  EN  PPEKTES EKPTETE+ 
Subjt:  PPEEKPSETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPI--------------------ESNIKVEVPDENKPPPEKTESPEKPTETEEP

Query:  VIKVIS
        V KVI+
Subjt:  VIKVIS

A0A6J1GDB0 pollen-specific leucine-rich repeat extensin-like protein 15.8e-8798.9Show/hide
Query:  MGACATKPKVLKPDSGDAPAPDPAPEPSPEKTVPETKLENGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP
        MGACATKPKVLKPDSGDAPAP PAPEPSPEKTVPETKLE+GTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP
Subjt:  MGACATKPKVLKPDSGDAPAPDPAPEPSPEKTVPETKLENGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP

Query:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN
        SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN
Subjt:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN

A0A6J1IUX1 early nodulin-75-like2.7e-7691.16Show/hide
Query:  MGACATKPKVLKPDSGDAPAPDPAPEPSPEKTVPETKLENGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP
        MGACATKPKVLK DSG+APAP PAPE SPEKTV ETKLENG+S AQGTEIVDEDKV SKPRCLSHLF+DQEKTAAADPSEKEEIP E+EKKMNPPPEEKP
Subjt:  MGACATKPKVLKPDSGDAPAPDPAPEPSPEKTVPETKLENGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKP

Query:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN
        SETIPPETEKKINPPTEEKP ETNPPEPEPPVSDSVTENA PIESN KVEV DEN+PPPEKTESPEKPTETEEPVIKVISN
Subjt:  SETIPPETEKKINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCCTGTGCGACGAAGCCAAAGGTTCTCAAGCCTGACTCCGGCGACGCTCCGGCTCCGGATCCGGCGCCAGAGCCTTCTCCGGAGAAGACGGTGCCCGAAACTAA
ACTGGAGAATGGCACCAGCGACGCCCAGGGCACGGAGATCGTCGATGAAGACAAGGTGGATTCTAAGCCTCGTTGTCTCAGCCATTTGTTCAATGATCAGGAGAAGACAG
CAGCAGCGGATCCATCGGAGAAGGAAGAGATCCCACCGGAATCTGAGAAGAAAATGAACCCACCGCCGGAGGAGAAGCCGTCTGAAACTATCCCACCGGAAACAGAGAAG
AAAATAAACCCTCCGACGGAGGAGAAGCCGTCTGAGACCAACCCACCGGAGCCGGAGCCACCAGTTTCCGACTCTGTTACAGAAAATGCAGGACCAATTGAAAGCAATAT
CAAAGTCGAAGTTCCCGATGAGAACAAGCCTCCGCCTGAGAAGACAGAGTCGCCGGAGAAACCCACTGAAACAGAGGAACCAGTGATCAAAGTAATCAGCAATTAA
mRNA sequenceShow/hide mRNA sequence
ACACAGAAGGATGGGAGCCTGTGCGACGAAGCCAAAGGTTCTCAAGCCTGACTCCGGCGACGCTCCGGCTCCGGATCCGGCGCCAGAGCCTTCTCCGGAGAAGACGGTGC
CCGAAACTAAACTGGAGAATGGCACCAGCGACGCCCAGGGCACGGAGATCGTCGATGAAGACAAGGTGGATTCTAAGCCTCGTTGTCTCAGCCATTTGTTCAATGATCAG
GAGAAGACAGCAGCAGCGGATCCATCGGAGAAGGAAGAGATCCCACCGGAATCTGAGAAGAAAATGAACCCACCGCCGGAGGAGAAGCCGTCTGAAACTATCCCACCGGA
AACAGAGAAGAAAATAAACCCTCCGACGGAGGAGAAGCCGTCTGAGACCAACCCACCGGAGCCGGAGCCACCAGTTTCCGACTCTGTTACAGAAAATGCAGGACCAATTG
AAAGCAATATCAAAGTCGAAGTTCCCGATGAGAACAAGCCTCCGCCTGAGAAGACAGAGTCGCCGGAGAAACCCACTGAAACAGAGGAACCAGTGATCAAAGTAATCAGC
AATTAA
Protein sequenceShow/hide protein sequence
MGACATKPKVLKPDSGDAPAPDPAPEPSPEKTVPETKLENGTSDAQGTEIVDEDKVDSKPRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKPSETIPPETEK
KINPPTEEKPSETNPPEPEPPVSDSVTENAGPIESNIKVEVPDENKPPPEKTESPEKPTETEEPVIKVISN