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Carg10572 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10572
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSANT domain-containing protein
Genome locationCarg_Chr01:12517899..12519035
RNA-Seq ExpressionCarg10572
SyntenyCarg10572
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0010158 - abaxial cell fate specification (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608510.1 putative transcription factor KAN4, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2071.11Show/hide
Query:  MRWTTTLHAHFVHAVELLGGHETYHSESI--GLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSSLSL
        MRWTTTLHAHFVHAVELLGGHE    +S+   ++V       +     MFRTVKNSVKKGTDD+GRPEIEADGVLSSSSSSSSSSSS SL
Subjt:  MRWTTTLHAHFVHAVELLGGHETYHSESI--GLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSSLSL

KAG7037833.1 putative transcription factor KAN4, partial [Cucurbita argyrosperma subsp. argyrosperma]9.5e-46100Show/hide
Query:  MRWTTTLHAHFVHAVELLGGHETYHSESIGLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSSLSLQKSNFHTLKR
        MRWTTTLHAHFVHAVELLGGHETYHSESIGLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSSLSLQKSNFHTLKR
Subjt:  MRWTTTLHAHFVHAVELLGGHETYHSESIGLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSSLSLQKSNFHTLKR

XP_022941100.1 probable transcription factor KAN4 [Cucurbita moschata]8.3e-2673.79Show/hide
Query:  MRWTTTLHAHFVHAVELLGGHETYHSESI--GLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVL---SSSSSSSSSSSSLSLQKSNFHT
        MRWTTTLHAHFVHAVELLGGHE    +S+   ++V       +     MFRTVKNSVKKGTDDYGRPEIEADGVL   SSSSSSSSSSSSLSLQKSNFHT
Subjt:  MRWTTTLHAHFVHAVELLGGHETYHSESI--GLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVL---SSSSSSSSSSSSLSLQKSNFHT

Query:  LKR
        LKR
Subjt:  LKR

XP_022982284.1 probable transcription factor KAN4 [Cucurbita maxima]1.4e-2071.91Show/hide
Query:  MRWTTTLHAHFVHAVELLGGHETYHSESI--GLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSSLS
        MRWTTTLHAHFVHAVELLGGHE    +S+   ++V       +     MFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSS S
Subjt:  MRWTTTLHAHFVHAVELLGGHETYHSESI--GLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSSLS

XP_023525472.1 probable transcription factor KAN4 [Cucurbita pepo subsp. pepo]6.0e-2471.29Show/hide
Query:  MRWTTTLHAHFVHAVELLGGHETYHSESI--GLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSS--SSSSSSSLSLQKSNFHTL
        MRWTTTLHAHFVHAV+LLGGHE    +S+   ++V       +     MFRTVKNSVKKGTDDYGRPEIEADGVLSSSSS  SSSSSSS SLQKSNFHT+
Subjt:  MRWTTTLHAHFVHAVELLGGHETYHSESI--GLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSS--SSSSSSSLSLQKSNFHTL

Query:  K
        K
Subjt:  K

TrEMBL top hitse value%identityAlignment
A0A6J1CDC9 probable transcription factor KAN4 isoform X23.0e-1351Show/hide
Query:  MRWTTTLHAHFVHAVELLGGHETYHSESI--GLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSSLSLQKSNFHTLKR
        MRWTTTLHAHFVHAVELLGGHE    +S+   ++V       +     M+RTVKN+VK   DD GRPE++ D +LSS+SS+ +SS     Q  N HT++R
Subjt:  MRWTTTLHAHFVHAVELLGGHETYHSESI--GLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSSLSLQKSNFHTLKR

A0A6J1F986 probable transcription factor KAN44.6e-1457.89Show/hide
Query:  MRWTTTLHAHFVHAVELLGGHETYHSESI--GLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSSLSLQKSNF
        MRWTTTLHAHF+HAVELLGGHE    +S+   ++V       +     M+RTVKN+V KGTDD GRPE+E D  + SSSSSSSSS+  S Q SNF
Subjt:  MRWTTTLHAHFVHAVELLGGHETYHSESI--GLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSSLSLQKSNF

A0A6J1FSK4 probable transcription factor KAN44.0e-2673.79Show/hide
Query:  MRWTTTLHAHFVHAVELLGGHETYHSESI--GLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVL---SSSSSSSSSSSSLSLQKSNFHT
        MRWTTTLHAHFVHAVELLGGHE    +S+   ++V       +     MFRTVKNSVKKGTDDYGRPEIEADGVL   SSSSSSSSSSSSLSLQKSNFHT
Subjt:  MRWTTTLHAHFVHAVELLGGHETYHSESI--GLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVL---SSSSSSSSSSSSLSLQKSNFHT

Query:  LKR
        LKR
Subjt:  LKR

A0A6J1IEP7 probable transcription factor KAN41.0e-1356.84Show/hide
Query:  MRWTTTLHAHFVHAVELLGGHETYHSESI--GLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSSLSLQKSNF
        MRWTTTLHAHF+HAVELLGGHE    +S+   ++V       +     M+RTVKN++ KGTDD GRPE+E D V+ SSSSSSSS +  S Q SNF
Subjt:  MRWTTTLHAHFVHAVELLGGHETYHSESI--GLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSSLSLQKSNF

A0A6J1J438 probable transcription factor KAN46.7e-2171.91Show/hide
Query:  MRWTTTLHAHFVHAVELLGGHETYHSESI--GLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSSLS
        MRWTTTLHAHFVHAVELLGGHE    +S+   ++V       +     MFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSS S
Subjt:  MRWTTTLHAHFVHAVELLGGHETYHSESI--GLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSSLS

SwissProt top hitse value%identityAlignment
Q0J235 Probable transcription factor RL91.1e-0439.77Show/hide
Query:  MRWTTTLHAHFVHAVELLGGHETYHSESIGLSVPASPWETLH--GVPVMFRTVKNSVK----KGTDDYGRPEIEADGVLSSSSSSSSS
        MRWT+TLHA FVHAVELLGGHE    +S+   +        H      M+RTVK++ K     G  D G  + E  G   ++S    S
Subjt:  MRWTTTLHAHFVHAVELLGGHETYHSESIGLSVPASPWETLH--GVPVMFRTVKNSVK----KGTDDYGRPEIEADGVLSSSSSSSSS

Q93WJ9 Transcription repressor KAN11.3e-0542.86Show/hide
Query:  MRWTTTLHAHFVHAVELLGGHETYHSESIGLSVPASPWETLH--GVPVMFRTVKNSVKKGTDDYGRPEIE
        MRWT++LHA FVHAVELLGGHE    +S+   +        H      M+RTVK + K      G  E E
Subjt:  MRWTTTLHAHFVHAVELLGGHETYHSESIGLSVPASPWETLH--GVPVMFRTVKNSVKKGTDDYGRPEIE

Q941I2 Probable transcription factor KAN35.3e-0742.86Show/hide
Query:  MRWTTTLHAHFVHAVELLGGHETYHSESIGLSVPASPWETLH--GVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSS
        MRWTTTLHAHFVHAV+LLGGHE    +S+   +        H      M+RT+K S +K T   G+ + E    ++S
Subjt:  MRWTTTLHAHFVHAVELLGGHETYHSESIGLSVPASPWETLH--GVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSS

Q9C616 Probable transcription factor KAN21.3e-0540Show/hide
Query:  MRWTTTLHAHFVHAVELLGGHETYHSESIGLSVPASPWETLH--GVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSS
        MRWTTTLHA FVHAVELLGGHE    +S+   +        H      M+RTVK + K      G+ ++  +G    ++S
Subjt:  MRWTTTLHAHFVHAVELLGGHETYHSESIGLSVPASPWETLH--GVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSS

Q9FJV5 Probable transcription factor KAN41.3e-0534Show/hide
Query:  MRWTTTLHAHFVHAVELLGGHETYHSESI--GLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSSLSLQKSNFHTLKR
        MRWT+TLHAHFVHAV+LLGGHE    +S+   ++V       +     M+RTVK    KG+   G+ E EA+  +  ++++  +         N  ++++
Subjt:  MRWTTTLHAHFVHAVELLGGHETYHSESI--GLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSSLSLQKSNFHTLKR

Arabidopsis top hitse value%identityAlignment
AT1G32240.1 Homeodomain-like superfamily protein9.2e-0740Show/hide
Query:  MRWTTTLHAHFVHAVELLGGHETYHSESIGLSVPASPWETLH--GVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSS
        MRWTTTLHA FVHAVELLGGHE    +S+   +        H      M+RTVK + K      G+ ++  +G    ++S
Subjt:  MRWTTTLHAHFVHAVELLGGHETYHSESIGLSVPASPWETLH--GVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSS

AT4G17695.1 Homeodomain-like superfamily protein3.8e-0842.86Show/hide
Query:  MRWTTTLHAHFVHAVELLGGHETYHSESIGLSVPASPWETLH--GVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSS
        MRWTTTLHAHFVHAV+LLGGHE    +S+   +        H      M+RT+K S +K T   G+ + E    ++S
Subjt:  MRWTTTLHAHFVHAVELLGGHETYHSESIGLSVPASPWETLH--GVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSS

AT5G16560.1 Homeodomain-like superfamily protein9.2e-0742.86Show/hide
Query:  MRWTTTLHAHFVHAVELLGGHETYHSESIGLSVPASPWETLH--GVPVMFRTVKNSVKKGTDDYGRPEIE
        MRWT++LHA FVHAVELLGGHE    +S+   +        H      M+RTVK + K      G  E E
Subjt:  MRWTTTLHAHFVHAVELLGGHETYHSESIGLSVPASPWETLH--GVPVMFRTVKNSVKKGTDDYGRPEIE

AT5G42630.1 Homeodomain-like superfamily protein9.2e-0734Show/hide
Query:  MRWTTTLHAHFVHAVELLGGHETYHSESI--GLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSSLSLQKSNFHTLKR
        MRWT+TLHAHFVHAV+LLGGHE    +S+   ++V       +     M+RTVK    KG+   G+ E EA+  +  ++++  +         N  ++++
Subjt:  MRWTTTLHAHFVHAVELLGGHETYHSESI--GLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSSLSLQKSNFHTLKR

AT5G42630.2 Homeodomain-like superfamily protein9.2e-0734Show/hide
Query:  MRWTTTLHAHFVHAVELLGGHETYHSESI--GLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSSLSLQKSNFHTLKR
        MRWT+TLHAHFVHAV+LLGGHE    +S+   ++V       +     M+RTVK    KG+   G+ E EA+  +  ++++  +         N  ++++
Subjt:  MRWTTTLHAHFVHAVELLGGHETYHSESI--GLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSSLSLQKSNFHTLKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATGGACTACGACGCTACATGCTCATTTTGTACACGCTGTTGAGCTTCTTGGCGGCCATGAAACCTATCATAGTGAGTCGATCGGGCTATCGGTTCCTGCATCTCC
ATGGGAGACCCTCCACGGCGTTCCTGTGATGTTCCGAACAGTGAAGAACAGTGTGAAGAAGGGAACAGACGATTATGGAAGGCCTGAGATCGAAGCAGATGGGGTTTTAT
CTTCTTCTTCTTCTTCTTCTTCTTCTTCATCTTCTTTATCTCTTCAAAAATCTAACTTTCACACACTCAAACGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGATGGACTACGACGCTACATGCTCATTTTGTACACGCTGTTGAGCTTCTTGGCGGCCATGAAACCTATCATAGTGAGTCGATCGGGCTATCGGTTCCTGCATCTCC
ATGGGAGACCCTCCACGGCGTTCCTGTGATGTTCCGAACAGTGAAGAACAGTGTGAAGAAGGGAACAGACGATTATGGAAGGCCTGAGATCGAAGCAGATGGGGTTTTAT
CTTCTTCTTCTTCTTCTTCTTCTTCTTCATCTTCTTTATCTCTTCAAAAATCTAACTTTCACACACTCAAACGGTGA
Protein sequenceShow/hide protein sequence
MRWTTTLHAHFVHAVELLGGHETYHSESIGLSVPASPWETLHGVPVMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSSLSLQKSNFHTLKR