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Carg10592 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10592
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionIntraflagellar transport protein
Genome locationCarg_Chr01:12419713..12420156
RNA-Seq ExpressionCarg10592
SyntenyCarg10592
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608487.1 hypothetical protein SDJN03_01829, partial [Cucurbita argyrosperma subsp. sororia]6.6e-67100Show/hide
Query:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAV
        MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAV
Subjt:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAV

Query:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQ
        GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQ
Subjt:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQ

KAG7037814.1 hypothetical protein SDJN02_01445, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-72100Show/hide
Query:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAV
        MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAV
Subjt:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAV

Query:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQATSDQIFQLS
        GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQATSDQIFQLS
Subjt:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQATSDQIFQLS

XP_008452533.1 PREDICTED: uncharacterized protein LOC103493531 [Cucumis melo]1.4e-4574.45Show/hide
Query:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAV
        M QR+WHK+ +G+E+++S GGI  WNVFDNVKTTTKTPEAL+AEIN AI+NLEY R+ A+LESPIS  P+D    A+S +QYD RIAD AYKAGC AL +
Subjt:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAV

Query:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQ
        GKLDEALHSLNVSLSKCPPEKSSAVAK+QSLISLTSQ
Subjt:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQ

XP_022940904.1 uncharacterized protein LOC111446352 [Cucurbita moschata]5.6e-6698.54Show/hide
Query:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAV
        MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSG SSSTQYDARIADEAYKAGCAALAV
Subjt:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAV

Query:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQ
        GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTS+
Subjt:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQ

XP_038899466.1 uncharacterized protein LOC120086752 [Benincasa hispida]6.8e-4879.56Show/hide
Query:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISP-TPQDRSSGASSSTQYDARIADEAYKAGCAALA
        MPQRDWHKN K  ENM+SG GIAAWNVFDNVKTTTKTPEAL+AEIN AI+N EYAR+TA L+SPISP   +D  S AS  TQY  R+AD +YKAGCAA  
Subjt:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISP-TPQDRSSGASSSTQYDARIADEAYKAGCAALA

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTS
        VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTS
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTS

TrEMBL top hitse value%identityAlignment
A0A0A0L090 Uncharacterized protein1.5e-4574.64Show/hide
Query:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISP-TPQDRSSGASSSTQYDARIADEAYKAGCAALA
        MPQR+ HK+ + +E+++S GGIAAWNVFD+VKTTTKTPEAL+ EI  AI+NLEYAR+TA+LESPISP  P+D    A+S +QYD R+AD AYKAGC AL 
Subjt:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISP-TPQDRSSGASSSTQYDARIADEAYKAGCAALA

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQ
        VGKLDEALHSLNVSLSKCPPEKSSAVAK+QSLISLTSQ
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQ

A0A1S3BU07 uncharacterized protein LOC1034935316.9e-4674.45Show/hide
Query:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAV
        M QR+WHK+ +G+E+++S GGI  WNVFDNVKTTTKTPEAL+AEIN AI+NLEY R+ A+LESPIS  P+D    A+S +QYD RIAD AYKAGC AL +
Subjt:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAV

Query:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQ
        GKLDEALHSLNVSLSKCPPEKSSAVAK+QSLISLTSQ
Subjt:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQ

A0A5A7VF87 Uncharacterized protein6.9e-4674.45Show/hide
Query:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAV
        M QR+WHK+ +G+E+++S GGI  WNVFDNVKTTTKTPEAL+AEIN AI+NLEY R+ A+LESPIS  P+D    A+S +QYD RIAD AYKAGC AL +
Subjt:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAV

Query:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQ
        GKLDEALHSLNVSLSKCPPEKSSAVAK+QSLISLTSQ
Subjt:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQ

A0A6J1BP49 uncharacterized protein LOC1110261681.2e-4575.18Show/hide
Query:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAV
        MP RD  KNPK +EN+ S GGI AWN FDNV  TTKTPEAL+AEIN AI+ +EYAR+TA LES   P  QD  SGAS   QYDAR+ADEAYKAGCAALAV
Subjt:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAV

Query:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQ
        GKLD+ALHSLNVSLSKCPPEK+SAVAKL SLI+LTSQ
Subjt:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQ

A0A6J1FLM9 uncharacterized protein LOC1114463522.7e-6698.54Show/hide
Query:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAV
        MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSG SSSTQYDARIADEAYKAGCAALAV
Subjt:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAV

Query:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQ
        GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTS+
Subjt:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCAACGAGATTGGCATAAGAATCCGAAAGGAAAAGAGAATATGAGTTCTGGAGGAGGAATCGCCGCTTGGAATGTGTTTGACAATGTGAAGACCACAACGAAGAC
GCCTGAAGCTCTAATCGCGGAGATCAATACTGCAATTGCAAATCTCGAATATGCTCGATCAACCGCCTTCTTAGAATCTCCAATTTCTCCCACTCCACAAGATAGGAGCT
CTGGTGCGAGCTCAAGTACTCAGTATGATGCACGAATTGCGGATGAAGCGTACAAGGCAGGGTGTGCGGCATTGGCTGTTGGTAAACTCGATGAGGCTCTTCATTCGTTG
AATGTCTCTCTTTCGAAATGCCCGCCTGAGAAATCCTCTGCTGTTGCTAAGCTTCAGTCTCTCATCTCTTTGACGTCTCAAGCAACTTCAGATCAGATCTTCCAATTGTC
ATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCAACGAGATTGGCATAAGAATCCGAAAGGAAAAGAGAATATGAGTTCTGGAGGAGGAATCGCCGCTTGGAATGTGTTTGACAATGTGAAGACCACAACGAAGAC
GCCTGAAGCTCTAATCGCGGAGATCAATACTGCAATTGCAAATCTCGAATATGCTCGATCAACCGCCTTCTTAGAATCTCCAATTTCTCCCACTCCACAAGATAGGAGCT
CTGGTGCGAGCTCAAGTACTCAGTATGATGCACGAATTGCGGATGAAGCGTACAAGGCAGGGTGTGCGGCATTGGCTGTTGGTAAACTCGATGAGGCTCTTCATTCGTTG
AATGTCTCTCTTTCGAAATGCCCGCCTGAGAAATCCTCTGCTGTTGCTAAGCTTCAGTCTCTCATCTCTTTGACGTCTCAAGCAACTTCAGATCAGATCTTCCAATTGTC
ATGA
Protein sequenceShow/hide protein sequence
MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGASSSTQYDARIADEAYKAGCAALAVGKLDEALHSL
NVSLSKCPPEKSSAVAKLQSLISLTSQATSDQIFQLS