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Carg10597 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10597
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCalcium-binding EF-hand family protein
Genome locationCarg_Chr01:12397360..12397632
RNA-Seq ExpressionCarg10597
SyntenyCarg10597
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591370.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]1.0e-3386.36Show/hide
Query:  MARKNKMSQPRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEKRHYT
        MARK+K  QPRPKLSREQLSVIFRNHDGDGDGRLS TELT AFRYIGAFLPSYRA HAL +TDSD DGFIGEKDFE LVNY EKR YT
Subjt:  MARKNKMSQPRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEKRHYT

KAG6600743.1 Calcium-binding protein CML38, partial [Cucurbita argyrosperma subsp. sororia]4.3e-2972.22Show/hide
Query:  MARKNKMSQPRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEKRHYTIV
        M RK KM   RPK+SR+QL VIFRNHD DGDGRLS+ ELT+AF YIGA LPS+RA HAL YTDSDRDGFI EKDFE L++Y EKR YT++
Subjt:  MARKNKMSQPRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEKRHYTIV

KAG6608481.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]1.4e-43100Show/hide
Query:  MARKNKMSQPRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEKRHYTIV
        MARKNKMSQPRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEKRHYTIV
Subjt:  MARKNKMSQPRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEKRHYTIV

KAG7024248.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-3484.44Show/hide
Query:  MARKNKMSQPRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEKRHYTIV
        MARK+K  QPRPKLSREQLSVIFRNHDGDGDGRLS TELT AFRYIGAFLPSYRA HAL +TDSD DGFIGEKDFE LVNY EKR YT++
Subjt:  MARKNKMSQPRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEKRHYTIV

KGN55185.1 hypothetical protein Csa_012915 [Cucumis sativus]4.6e-3177.78Show/hide
Query:  MARKNKMSQPRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEKRHYTIV
        M+RK+K   PR KLSREQL +IFRNHD D DGRLS TELTEAFRYIGAFLP+YRA HAL + DSDRDGFIGEKDFESLVNY E+R YTI+
Subjt:  MARKNKMSQPRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEKRHYTIV

TrEMBL top hitse value%identityAlignment
A0A0A0KZR6 Uncharacterized protein2.2e-3177.78Show/hide
Query:  MARKNKMSQPRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEKRHYTIV
        M+RK+K   PR KLSREQL +IFRNHD D DGRLS TELTEAFRYIGAFLP+YRA HAL + DSDRDGFIGEKDFESLVNY E+R YTI+
Subjt:  MARKNKMSQPRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEKRHYTIV

A0A5A7VDB9 Putative calcium-binding protein CML274.7e-2972.22Show/hide
Query:  MARKNKMSQPRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEKRHYTIV
        M+R++K   PR +LSREQL +IFRNHD D DGRLS TELTEAFRYIGAFLP YRA HAL + DSDRDGFI EKDFE LVNY E+R YT++
Subjt:  MARKNKMSQPRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEKRHYTIV

A0A6J1CSH1 probable calcium-binding protein CML153.6e-1346.25Show/hide
Query:  NKMSQPRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEK
        N+   P+ K SR Q+  IF  HD DGDG LS +EL +AF ++G+ +P Y+AH+ L + D D DG I E++ + LV+Y EK
Subjt:  NKMSQPRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEK

A0A6J1GK16 calmodulin-like7.3e-1452.78Show/hide
Query:  KLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEK
        KLSR Q+  IF  HD DGDG LS +ELT+AF + G+ +P Y+AH+ L Y D+D DG I E++ E LV+Y E+
Subjt:  KLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEK

A0A6J1KUW2 calmodulin-like7.3e-1452.78Show/hide
Query:  KLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEK
        KLSR Q+  IF  HD DGDG LS +ELT+AF + G+ +P Y+AH+ L Y D+D DG I E++ E LV+Y E+
Subjt:  KLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEK

SwissProt top hitse value%identityAlignment
Q0DJV6 Probable calcium-binding protein CML181.6e-0539.66Show/hide
Query:  QLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDF
        +L  +FR +D +GDG++SA EL    R +GA L        +   DSDRDGF+   +F
Subjt:  QLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDF

Q39419 Polcalcin Bet v 41.6e-0539.39Show/hide
Query:  PRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDF
        P+ K  RE+   IF+  D +GDG++SA EL EA + +G+  P     H +   D+D DGFI  ++F
Subjt:  PRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDF

Q6L4D4 Probable calcium-binding protein CML154.1e-0632.39Show/hide
Query:  SQPRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESL
        ++PRP  + ++   +FR  D +GDGR+S  EL   FR +G  +        ++  DSD DG+I   +F ++
Subjt:  SQPRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESL

Q8L3R2 Probable calcium-binding protein CML414.9e-0738.46Show/hide
Query:  SREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLV
        S+E+L  +F + D DGDG++SA EL   F  +G ++    A  A+   D+D DG +G +DF  L+
Subjt:  SREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLV

Q9LE22 Probable calcium-binding protein CML271.3e-0433.87Show/hide
Query:  EQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESL
        E+L  +F   D +GDG++S  EL   F+ +G        +  L   D+DRDG+I   +F +L
Subjt:  EQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESL

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein9.4e-0633.87Show/hide
Query:  EQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESL
        E+L  +F   D +GDG++S  EL   F+ +G        +  L   D+DRDG+I   +F +L
Subjt:  EQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESL

AT1G18210.2 Calcium-binding EF-hand family protein9.4e-0633.87Show/hide
Query:  EQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESL
        E+L  +F   D +GDG++S  EL   F+ +G        +  L   D+DRDG+I   +F +L
Subjt:  EQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESL

AT1G76650.1 calmodulin-like 384.7e-0531.34Show/hide
Query:  QLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEK
        +L  +F   D + DGR+S  EL ++F  +G  L    A  A+R +D+D DG +  ++F  L+   ++
Subjt:  QLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEK

AT1G76650.3 calmodulin-like 384.7e-0531.34Show/hide
Query:  QLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEK
        +L  +F   D + DGR+S  EL ++F  +G  L    A  A+R +D+D DG +  ++F  L+   ++
Subjt:  QLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEK

AT3G50770.1 calmodulin-like 413.4e-0838.46Show/hide
Query:  SREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLV
        S+E+L  +F + D DGDG++SA EL   F  +G ++    A  A+   D+D DG +G +DF  L+
Subjt:  SREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGGAAAAACAAGATGTCCCAGCCGAGGCCGAAGCTTTCCCGGGAGCAACTCAGCGTAATCTTCAGAAACCACGACGGCGATGGCGACGGCCGCTTGAGCGCCAC
CGAGCTCACGGAAGCCTTCCGCTACATCGGCGCCTTTCTGCCGTCGTACAGAGCTCATCACGCTCTTCGTTACACGGATTCCGACAGGGATGGATTCATCGGCGAGAAGG
ATTTCGAATCGCTCGTCAATTATACCGAAAAACGACATTACACCATCGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGGAAAAACAAGATGTCCCAGCCGAGGCCGAAGCTTTCCCGGGAGCAACTCAGCGTAATCTTCAGAAACCACGACGGCGATGGCGACGGCCGCTTGAGCGCCAC
CGAGCTCACGGAAGCCTTCCGCTACATCGGCGCCTTTCTGCCGTCGTACAGAGCTCATCACGCTCTTCGTTACACGGATTCCGACAGGGATGGATTCATCGGCGAGAAGG
ATTTCGAATCGCTCGTCAATTATACCGAAAAACGACATTACACCATCGTTTGA
Protein sequenceShow/hide protein sequence
MARKNKMSQPRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALRYTDSDRDGFIGEKDFESLVNYTEKRHYTIV