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Carg10598 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10598
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionParvalbumin
Genome locationCarg_Chr01:12391337..12391741
RNA-Seq ExpressionCarg10598
SyntenyCarg10598
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064378.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]1.2e-3077.27Show/hide
Query:  KSKAVAAQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNRDGKLGRDEIDKFIKYLMSEGYVV
        KS + A  SES YSAKELR+IFNQMDTNEDGGLGLFEIK ALK+LDAE PVHLA+ ALC +DRNRDGKLG +EID+F+KY+MS+GYVV
Subjt:  KSKAVAAQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNRDGKLGRDEIDKFIKYLMSEGYVV

KAG6608479.1 hypothetical protein SDJN03_01821, partial [Cucurbita argyrosperma subsp. sororia]1.2e-6798.51Show/hide
Query:  MAVLGAQAAAINPINFPFLLFHRQQTKYNCTIGNPVDYKTMSSYGRKSKAVAAQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLA
        MAVLGA+AAAINPINFPFLLFHRQQTKYNCTI NPVDYKTMSSYGRKSKAVAAQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLA
Subjt:  MAVLGAQAAAINPINFPFLLFHRQQTKYNCTIGNPVDYKTMSSYGRKSKAVAAQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLA

Query:  FKALCQSDRNRDGKLGRDEIDKFIKYLMSEGYVV
        FKALCQSDRNRDGKLGRDEIDKFIKYLMSEGYVV
Subjt:  FKALCQSDRNRDGKLGRDEIDKFIKYLMSEGYVV

KAG7024250.1 hypothetical protein SDJN02_13064, partial [Cucurbita argyrosperma subsp. argyrosperma]6.5e-2978.75Show/hide
Query:  SESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNRDGKLGRDEIDKFIKYLMSEGYVV
        S+S YS KEL+EIF+QMDTNEDGGLGLFEIK ALKQLDAEFP+HLA+KALC +DRN DGKLG +EID+F+KY++SEGYVV
Subjt:  SESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNRDGKLGRDEIDKFIKYLMSEGYVV

KAG7037807.1 hypothetical protein SDJN02_01438, partial [Cucurbita argyrosperma subsp. argyrosperma]6.4e-69100Show/hide
Query:  MAVLGAQAAAINPINFPFLLFHRQQTKYNCTIGNPVDYKTMSSYGRKSKAVAAQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLA
        MAVLGAQAAAINPINFPFLLFHRQQTKYNCTIGNPVDYKTMSSYGRKSKAVAAQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLA
Subjt:  MAVLGAQAAAINPINFPFLLFHRQQTKYNCTIGNPVDYKTMSSYGRKSKAVAAQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLA

Query:  FKALCQSDRNRDGKLGRDEIDKFIKYLMSEGYVV
        FKALCQSDRNRDGKLGRDEIDKFIKYLMSEGYVV
Subjt:  FKALCQSDRNRDGKLGRDEIDKFIKYLMSEGYVV

KGN55187.1 hypothetical protein Csa_012728 [Cucumis sativus]2.6e-3076.14Show/hide
Query:  KSKAVAAQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNRDGKLGRDEIDKFIKYLMSEGYVV
        KS +    SES YSAKELR+IFNQMDTNEDGGLGLFEIK ALK+LDAE PVHLA+ ALC +DRNRDGKLG +EID+F+KY+MS+GYVV
Subjt:  KSKAVAAQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNRDGKLGRDEIDKFIKYLMSEGYVV

TrEMBL top hitse value%identityAlignment
A0A061EED0 Calcium-binding EF-hand family protein, putative2.6e-0741.43Show/hide
Query:  ELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNRDGKLGRDEIDKFIKYLMSEGY
        EL  +F + D + DG L   ++K A   + + FP + A  ALCQ+D+NRDG +  DE+D  I+Y  S GY
Subjt:  ELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNRDGKLGRDEIDKFIKYLMSEGY

A0A0A0L3J7 Uncharacterized protein1.3e-3076.14Show/hide
Query:  KSKAVAAQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNRDGKLGRDEIDKFIKYLMSEGYVV
        KS +    SES YSAKELR+IFNQMDTNEDGGLGLFEIK ALK+LDAE PVHLA+ ALC +DRNRDGKLG +EID+F+KY+MS+GYVV
Subjt:  KSKAVAAQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNRDGKLGRDEIDKFIKYLMSEGYVV

A0A5D3D9N2 Putative calcium-binding protein CML105.7e-3177.27Show/hide
Query:  KSKAVAAQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNRDGKLGRDEIDKFIKYLMSEGYVV
        KS + A  SES YSAKELR+IFNQMDTNEDGGLGLFEIK ALK+LDAE PVHLA+ ALC +DRNRDGKLG +EID+F+KY+MS+GYVV
Subjt:  KSKAVAAQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNRDGKLGRDEIDKFIKYLMSEGYVV

A0A6J1BIL5 probable calcium-binding protein CML101.8e-0835.11Show/hide
Query:  MSSYGRKSKAVAAQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNRDGKLGRDEIDKFIKYLMSEGYVV
        + ++G K  +    S   ++  +L  +F + D+N DG L   E++ A   L + FP + AF AL Q+D+N DG + +DE+D  I+Y +S GY V
Subjt:  MSSYGRKSKAVAAQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNRDGKLGRDEIDKFIKYLMSEGYVV

W9S022 Putative calcium-binding protein CML104.4e-0731.31Show/hide
Query:  VDYKTMSSYGRKSKAVAAQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNRDGKLGRDEIDKFIKYLMSEGYVV
        + YK++ ++  K           Y  ++L+ +  + DT+ DG L   E+K+A K+L A  P   A +ALC +D+NRDG +  +E+   + Y    GYV+
Subjt:  VDYKTMSSYGRKSKAVAAQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNRDGKLGRDEIDKFIKYLMSEGYVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTCTTGGAGCTCAAGCCGCCGCCATTAATCCTATAAATTTCCCCTTCCTCCTCTTCCATCGGCAACAAACCAAATACAATTGCACAATCGGAAACCCAGTCGA
TTACAAAACGATGTCGTCGTACGGTCGGAAATCGAAGGCGGTGGCCGCCCAGTCGGAGAGCGGGTACTCGGCGAAGGAACTGAGAGAGATATTTAACCAGATGGACACGA
ATGAAGATGGTGGATTGGGATTGTTCGAGATCAAGGAAGCTTTGAAGCAACTGGACGCTGAATTCCCAGTTCATCTTGCCTTCAAGGCGCTCTGCCAATCCGATCGAAAC
AGAGATGGAAAGCTTGGTCGGGACGAGATCGATAAGTTCATCAAGTACTTGATGAGCGAAGGTTACGTTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTCTTGGAGCTCAAGCCGCCGCCATTAATCCTATAAATTTCCCCTTCCTCCTCTTCCATCGGCAACAAACCAAATACAATTGCACAATCGGAAACCCAGTCGA
TTACAAAACGATGTCGTCGTACGGTCGGAAATCGAAGGCGGTGGCCGCCCAGTCGGAGAGCGGGTACTCGGCGAAGGAACTGAGAGAGATATTTAACCAGATGGACACGA
ATGAAGATGGTGGATTGGGATTGTTCGAGATCAAGGAAGCTTTGAAGCAACTGGACGCTGAATTCCCAGTTCATCTTGCCTTCAAGGCGCTCTGCCAATCCGATCGAAAC
AGAGATGGAAAGCTTGGTCGGGACGAGATCGATAAGTTCATCAAGTACTTGATGAGCGAAGGTTACGTTGTTTGA
Protein sequenceShow/hide protein sequence
MAVLGAQAAAINPINFPFLLFHRQQTKYNCTIGNPVDYKTMSSYGRKSKAVAAQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRN
RDGKLGRDEIDKFIKYLMSEGYVV