; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg10605 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10605
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCold regulated protein 27
Genome locationCarg_Chr01:12358542..12360497
RNA-Seq ExpressionCarg10605
SyntenyCarg10605
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608473.1 Cold-regulated protein 27, partial [Cucurbita argyrosperma subsp. sororia]2.2e-13299.18Show/hide
Query:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
        MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
Subjt:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ

Query:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNN
        AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNK+VACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNN
Subjt:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNN

Query:  KEVSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQI
        KEVSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQ+
Subjt:  KEVSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQI

KAG7037801.1 hypothetical protein SDJN02_01432 [Cucurbita argyrosperma subsp. argyrosperma]1.0e-153100Show/hide
Query:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
        MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
Subjt:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ

Query:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNN
        AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNN
Subjt:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNN

Query:  KEVSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQIAKSMIFAKTDLVDYFSNPGKAIDDQRLLVKSVKSSF
        KEVSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQIAKSMIFAKTDLVDYFSNPGKAIDDQRLLVKSVKSSF
Subjt:  KEVSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQIAKSMIFAKTDLVDYFSNPGKAIDDQRLLVKSVKSSF

XP_022940327.1 uncharacterized protein LOC111445977 isoform X1 [Cucurbita moschata]5.3e-12695.88Show/hide
Query:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
        ME+LPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
Subjt:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ

Query:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNN
        AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAAR+NK+VACKSPAISSRKRNLLPFG    +GPMRACNSDLSQH IYNN
Subjt:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNN

Query:  KEVSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQI
        KEVSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQ+
Subjt:  KEVSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQI

XP_022982275.1 uncharacterized protein LOC111481154 [Cucurbita maxima]3.2e-13197.94Show/hide
Query:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
        MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
Subjt:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ

Query:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNN
        AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAAR+NK+VACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLS+HYIYNN
Subjt:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNN

Query:  KEVSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQI
        KE+SDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQ+
Subjt:  KEVSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQI

XP_023525276.1 uncharacterized protein LOC111788927 isoform X1 [Cucurbita pepo subsp. pepo]2.1e-13097.53Show/hide
Query:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
        MELLPPNLENLKPKETRTDSLIS LAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
Subjt:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ

Query:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNN
        AASHVHSHVGQFKVLRQGSWKNVNFEPTE+RPNLLNDY+ALSRNPWIHHFRAAR+NK+VACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNN
Subjt:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNN

Query:  KEVSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQI
        KEVSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQ+
Subjt:  KEVSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQI

TrEMBL top hitse value%identityAlignment
A0A6J1F6L8 uncharacterized protein LOC111442637 isoform X16.0e-9172.59Show/hide
Query:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
        MELLPPNLEN    ETRTDSLISELA DESTE  L  ESSS GT MT+SVPSDWTDEKHHLFLESME SFVSQMFDS HS G+   KENSS TKLHGQSQ
Subjt:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ

Query:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNN
        +ASHVHSH GQFKVLR+GSWKN+NFE TE+R NLLND+QALSRNPWIHHFRA R+NK+VACKS AI S  RNL P G  N+S P+RAC+SDLS  YI +N
Subjt:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNN

Query:  KEVSDQNFVDGEREVEKVAKGSNDC-NTKRVKTSETNDLINDQ-IAKSMIFAKTDLVDY
        +EVSDQNFVD +RE   V  GS+DC N KRV T ETN LIN+Q IA+S I A T    Y
Subjt:  KEVSDQNFVDGEREVEKVAKGSNDC-NTKRVKTSETNDLINDQ-IAKSMIFAKTDLVDY

A0A6J1FJA4 uncharacterized protein LOC111445977 isoform X12.6e-12695.88Show/hide
Query:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
        ME+LPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
Subjt:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ

Query:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNN
        AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAAR+NK+VACKSPAISSRKRNLLPFG    +GPMRACNSDLSQH IYNN
Subjt:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNN

Query:  KEVSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQI
        KEVSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQ+
Subjt:  KEVSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQI

A0A6J1FNZ0 uncharacterized protein LOC111445977 isoform X24.4e-10295.45Show/hide
Query:  MTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNP
        MTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNP
Subjt:  MTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNP

Query:  WIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNNKEVSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQI
        WIHHFRAAR+NK+VACKSPAISSRKRNLLPFG    +GPMRACNSDLSQH IYNNKEVSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQ+
Subjt:  WIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNNKEVSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQI

A0A6J1IFL9 uncharacterized protein LOC111476815 isoform X17.8e-9171.71Show/hide
Query:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
        MELLPPNLEN    ETRTD LISEL  D+STE  L  ESSS GT MT+SVPSDWTDEKHHLFLESME SFVSQMFDS HS G+   KENSS TKLHGQSQ
Subjt:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ

Query:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNN
        +ASHVH+H GQFKVLR+GSWKN+NFE TE+R NLLND+QALSRNPWIHHFRA R+NK+VACKS AI S  RNL P G  NNS P+RAC SDLS  YI +N
Subjt:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNN

Query:  KEVSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQ-IAKSMIFAKTDLVDY
        +EVSDQNFVD +RE   V  GS+DCN KRV T ETN LIN+Q IA+S+I A T  + Y
Subjt:  KEVSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQ-IAKSMIFAKTDLVDY

A0A6J1J278 uncharacterized protein LOC1114811541.6e-13197.94Show/hide
Query:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
        MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
Subjt:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ

Query:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNN
        AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAAR+NK+VACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLS+HYIYNN
Subjt:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNN

Query:  KEVSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQI
        KE+SDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQ+
Subjt:  KEVSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQI

SwissProt top hitse value%identityAlignment
Q8L8T7 Cold-regulated protein 271.3e-1030.88Show/hide
Query:  DESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLL-
        + +SS  +   E + ++WT+EKH L+L+SMEASFV Q+++S    G     EN S +   G  +  S       QFKVL  G W+ +N +  E R N   
Subjt:  DESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLL-

Query:  --NDYQALSRNPWIHHFRAARRNKSVACKSP-----AISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNNKEVSDQNFVDGEREVEKVAKGSNDCNTK
          N ++ L R+PWI H++   + +      P     + S+ K+ +   G  ++   + + + D  Q  +    EVSDQNFV+      +  KG N  ++K
Subjt:  --NDYQALSRNPWIHHFRAARRNKSVACKSP-----AISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNNKEVSDQNFVDGEREVEKVAKGSNDCNTK

Query:  RVKT
        ++KT
Subjt:  RVKT

Q8L983 Cold-regulated protein 288.3e-0525.32Show/hide
Query:  DSLISELAMDESTEAPLQDESSSQGTRMTESVPSD--------WTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVG
        D  +SE + +  +E+ L +   S  T  T    +D        WT+EKH+ +L+ +E+SFV Q++ S   GGT          +L       S+ H    
Subjt:  DSLISELAMDESTEAPLQDESSSQGTRMTESVPSD--------WTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVG

Query:  QFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNNKEVSDQNFVD
        QF VL+ G W+ VNF   ++          L  +      R + RNK                 P   + N         D+  H    + E S QNF +
Subjt:  QFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNNKEVSDQNFVD

Query:  GEREVEKVAKGSNDCNTKRVKTSETNDLINDQI
         E E E   KG      +R   ++ + L  DQ+
Subjt:  GEREVEKVAKGSNDCNTKRVKTSETNDLINDQI

Arabidopsis top hitse value%identityAlignment
AT4G33980.1 BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2)5.9e-0625.32Show/hide
Query:  DSLISELAMDESTEAPLQDESSSQGTRMTESVPSD--------WTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVG
        D  +SE + +  +E+ L +   S  T  T    +D        WT+EKH+ +L+ +E+SFV Q++ S   GGT          +L       S+ H    
Subjt:  DSLISELAMDESTEAPLQDESSSQGTRMTESVPSD--------WTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVG

Query:  QFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNNKEVSDQNFVD
        QF VL+ G W+ VNF   ++          L  +      R + RNK                 P   + N         D+  H    + E S QNF +
Subjt:  QFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNNKEVSDQNFVD

Query:  GEREVEKVAKGSNDCNTKRVKTSETNDLINDQI
         E E E   KG      +R   ++ + L  DQ+
Subjt:  GEREVEKVAKGSNDCNTKRVKTSETNDLINDQI

AT4G33980.2 FUNCTIONS IN: molecular_function unknown5.3e-0725.3Show/hide
Query:  DSLISELAMDESTEAPLQDESSSQGTRMTESVPSD--------WTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVG
        D  +SE + +  +E+ L +   S  T  T    +D        WT+EKH+ +L+ +E+SFV Q++ S   GGT          +L       S+ H    
Subjt:  DSLISELAMDESTEAPLQDESSSQGTRMTESVPSD--------WTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVG

Query:  QFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNNKEVSDQNFVD
        QF VL+ G W+ VNF   ++          L  +      R + RNK                 P   + N         D+  H    + E S QNF +
Subjt:  QFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNNKEVSDQNFVD

Query:  GEREVEKVAKGSNDCNTKRVKTSETNDLINDQIAK-SMIFAKTDLVDYFSNPG
         E E E   KG      +R   ++ + L  DQ+    M+  +TD + Y +  G
Subjt:  GEREVEKVAKGSNDCNTKRVKTSETNDLINDQIAK-SMIFAKTDLVDYFSNPG

AT5G42900.1 cold regulated gene 279.3e-1230.88Show/hide
Query:  DESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLL-
        + +SS  +   E + ++WT+EKH L+L+SMEASFV Q+++S    G     EN S +   G  +  S       QFKVL  G W+ +N +  E R N   
Subjt:  DESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLL-

Query:  --NDYQALSRNPWIHHFRAARRNKSVACKSP-----AISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNNKEVSDQNFVDGEREVEKVAKGSNDCNTK
          N ++ L R+PWI H++   + +      P     + S+ K+ +   G  ++   + + + D  Q  +    EVSDQNFV+      +  KG N  ++K
Subjt:  --NDYQALSRNPWIHHFRAARRNKSVACKSP-----AISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNNKEVSDQNFVDGEREVEKVAKGSNDCNTK

Query:  RVKT
        ++KT
Subjt:  RVKT

AT5G42900.2 cold regulated gene 279.3e-1230.88Show/hide
Query:  DESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLL-
        + +SS  +   E + ++WT+EKH L+L+SMEASFV Q+++S    G     EN S +   G  +  S       QFKVL  G W+ +N +  E R N   
Subjt:  DESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLL-

Query:  --NDYQALSRNPWIHHFRAARRNKSVACKSP-----AISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNNKEVSDQNFVDGEREVEKVAKGSNDCNTK
          N ++ L R+PWI H++   + +      P     + S+ K+ +   G  ++   + + + D  Q  +    EVSDQNFV+      +  KG N  ++K
Subjt:  --NDYQALSRNPWIHHFRAARRNKSVACKSP-----AISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNNKEVSDQNFVDGEREVEKVAKGSNDCNTK

Query:  RVKT
        ++KT
Subjt:  RVKT

AT5G42900.3 cold regulated gene 275.5e-1231.37Show/hide
Query:  DESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLL-
        + +SS  +   E + ++WT+EKH L+L+SMEASFV Q+++S    G     EN S +   G  +  S       QFKVL  G W+ +N +  E R N   
Subjt:  DESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLL-

Query:  --NDYQALSRNPWIHHFRAARRNKSVACKSP-----AISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNNKEVSDQNFVDGEREVEKVAKGSNDCNTK
          N ++ L R+PWI H++   + +      P     + S+ K+ +   G  ++   + + + D  Q  I   +EVSDQNFV+      +  KG N  ++K
Subjt:  --NDYQALSRNPWIHHFRAARRNKSVACKSP-----AISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNNKEVSDQNFVDGEREVEKVAKGSNDCNTK

Query:  RVKT
        ++KT
Subjt:  RVKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTTTTGCCTCCAAATTTAGAGAATCTCAAGCCTAAAGAAACTCGGACCGACTCACTGATCTCTGAATTGGCCATGGACGAGTCAACCGAGGCTCCCCTACAGGA
CGAATCTTCTAGCCAGGGCACTCGTATGACGGAGTCTGTACCTTCTGATTGGACCGATGAGAAGCACCATTTGTTCCTTGAATCCATGGAGGCATCTTTTGTCAGCCAGA
TGTTTGATTCTGCGCATTCAGGTGGTACCGGCTCCGGCAAGGAAAATTCATCATGGACAAAATTGCACGGCCAAAGCCAGGCCGCTTCTCATGTCCACTCACATGTTGGC
CAGTTTAAGGTTCTTCGACAAGGCAGCTGGAAGAATGTTAATTTTGAACCAACTGAAGCTCGGCCGAATTTATTGAATGATTACCAGGCTCTATCGCGCAATCCATGGAT
ACATCACTTCAGAGCTGCTCGCAGAAACAAAAGTGTTGCATGTAAAAGTCCAGCCATCAGTTCAAGAAAAAGGAATTTGTTGCCATTTGGAGGAGATAATAATTCAGGAC
CTATGCGTGCTTGTAACTCTGATTTGTCTCAGCATTATATATACAACAATAAAGAAGTGTCGGATCAGAACTTTGTTGATGGAGAAAGGGAAGTTGAAAAAGTTGCAAAG
GGTAGCAATGATTGCAATACCAAAAGGGTAAAAACTTCAGAAACCAATGATTTGATCAACGACCAGATAGCTAAATCCATGATTTTCGCCAAGACGGACTTGGTAGACTA
CTTTTCTAACCCGGGAAAGGCTATAGATGATCAGAGATTGTTGGTGAAGTCTGTAAAATCCTCATTTTGA
mRNA sequenceShow/hide mRNA sequence
AAGATCTCTCTCCACTCGCCCGCTTCCATTTTTCTTCTCCATCTCTCTCTCTCTCGCCATTGCAAATCTGGAGATAATCCTTCATCTTCTTCTGTTTTCATGGAGCTTTT
GCCTCCAAATTTAGAGAATCTCAAGCCTAAAGAAACTCGGACCGACTCACTGATCTCTGAATTGGCCATGGACGAGTCAACCGAGGCTCCCCTACAGGACGAATCTTCTA
GCCAGGGCACTCGTATGACGGAGTCTGTACCTTCTGATTGGACCGATGAGAAGCACCATTTGTTCCTTGAATCCATGGAGGCATCTTTTGTCAGCCAGATGTTTGATTCT
GCGCATTCAGGTGGTACCGGCTCCGGCAAGGAAAATTCATCATGGACAAAATTGCACGGCCAAAGCCAGGCCGCTTCTCATGTCCACTCACATGTTGGCCAGTTTAAGGT
TCTTCGACAAGGCAGCTGGAAGAATGTTAATTTTGAACCAACTGAAGCTCGGCCGAATTTATTGAATGATTACCAGGCTCTATCGCGCAATCCATGGATACATCACTTCA
GAGCTGCTCGCAGAAACAAAAGTGTTGCATGTAAAAGTCCAGCCATCAGTTCAAGAAAAAGGAATTTGTTGCCATTTGGAGGAGATAATAATTCAGGACCTATGCGTGCT
TGTAACTCTGATTTGTCTCAGCATTATATATACAACAATAAAGAAGTGTCGGATCAGAACTTTGTTGATGGAGAAAGGGAAGTTGAAAAAGTTGCAAAGGGTAGCAATGA
TTGCAATACCAAAAGGGTAAAAACTTCAGAAACCAATGATTTGATCAACGACCAGATAGCTAAATCCATGATTTTCGCCAAGACGGACTTGGTAGACTACTTTTCTAACC
CGGGAAAGGCTATAGATGATCAGAGATTGTTGGTGAAGTCTGTAAAATCCTCATTTTGA
Protein sequenceShow/hide protein sequence
MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVG
QFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNNKEVSDQNFVDGEREVEKVAK
GSNDCNTKRVKTSETNDLINDQIAKSMIFAKTDLVDYFSNPGKAIDDQRLLVKSVKSSF