; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg10606 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10606
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein DCL homolog, chloroplastic-like
Genome locationCarg_Chr01:12355725..12357882
RNA-Seq ExpressionCarg10606
SyntenyCarg10606
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:1901259 - chloroplast rRNA processing (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR044673 - Protein DCL-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608472.1 Protein DCL, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.9e-12799.56Show/hide
Query:  MVMAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGE
        MVMAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGE
Subjt:  MVMAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGE

Query:  EDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKS
        EDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKT+LERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKS
Subjt:  EDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKS

Query:  LIRKKYPLHAESFILRHFRRRRNLRW
        LIRKKYPLHAESFILRHFRRRRNLRW
Subjt:  LIRKKYPLHAESFILRHFRRRRNLRW

KAG7037800.1 Protein DCL, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]3.0e-127100Show/hide
Query:  MVMAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGE
        MVMAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGE
Subjt:  MVMAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGE

Query:  EDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKS
        EDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKS
Subjt:  EDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKS

Query:  LIRKKYPLHAESFILRHFRRRRNLRW
        LIRKKYPLHAESFILRHFRRRRNLRW
Subjt:  LIRKKYPLHAESFILRHFRRRRNLRW

XP_022940329.1 protein DCL homolog, chloroplastic-like [Cucurbita moschata]8.1e-12597.79Show/hide
Query:  MVMAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGE
        MVMAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRAL TGPEGSRIRSHEECSSD LRKPVVPPAKDLAGLSEDEESSEESGDDDD E
Subjt:  MVMAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGE

Query:  EDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKS
        EDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKT+LERLLPYHPKYEKKVGCGIDYIT+RYHPDYESSRCLFIVRKDGELVDFSYWKCIKS
Subjt:  EDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKS

Query:  LIRKKYPLHAESFILRHFRRRRNLRW
        LIRKKYPLHAESFILRHFRRRRNLRW
Subjt:  LIRKKYPLHAESFILRHFRRRRNLRW

XP_022982282.1 protein DCL homolog, chloroplastic-like [Cucurbita maxima]4.0e-12497.79Show/hide
Query:  MVMAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGE
        MVMAIASILKPPPSVPFHSL PSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSD LRKPVVPPAKDLAGLSEDEESSEESGDDDD E
Subjt:  MVMAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGE

Query:  EDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKS
        EDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKT+LERLLPYHP YEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKS
Subjt:  EDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKS

Query:  LIRKKYPLHAESFILRHFRRRRNLRW
        LIRKKYPLHAESFILRHFRRRRNLRW
Subjt:  LIRKKYPLHAESFILRHFRRRRNLRW

XP_023524488.1 protein DCL homolog, chloroplastic-like [Cucurbita pepo subsp. pepo]1.1e-12498.23Show/hide
Query:  MVMAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGE
        MVMAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSD LRKPVVPPAKDLAGLSEDEESSEESGDDDD E
Subjt:  MVMAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGE

Query:  EDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKS
        EDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKT+LERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKS
Subjt:  EDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKS

Query:  LIRKKYPLHAESFILRHFRRRRNLRW
        LIRKKYPLHAESFILRHFRR RNLRW
Subjt:  LIRKKYPLHAESFILRHFRRRRNLRW

TrEMBL top hitse value%identityAlignment
A0A1S3BVA4 protein DCL, chloroplastic3.4e-10081.7Show/hide
Query:  MAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGEED
        MA+ASIL   P  PFHSLNP+FF SSP+ILCFPTH + SFHPSTRALKTGPEGSRIRSH+E SSD LRKPVVPPAKDLAG SED++SSEESG+D++ E D
Subjt:  MAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGEED

Query:  WVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKSLI
        WVDWE+ ILEDTVPLV FVRMVLH+GKYE GDRL PEHEKT+LERLLPYHP+ EKK+GCG+DYIT+ YHPD+ESSRCLFIVRKDGELVDFSYWKCIK LI
Subjt:  WVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKSLI

Query:  RKKYPLHAESFILRHF-RRRRNLR
        RK YPL+AESFILRHF RRRRNLR
Subjt:  RKKYPLHAESFILRHF-RRRRNLR

A0A5A7VDC9 Protein DCL3.4e-10081.7Show/hide
Query:  MAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGEED
        MA+ASIL   P  PFHSLNP+FF SSP+ILCFPTH + SFHPSTRALKTGPEGSRIRSH+E SSD LRKPVVPPAKDLAG SED++SSEESG+D++ E D
Subjt:  MAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGEED

Query:  WVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKSLI
        WVDWE+ ILEDTVPLV FVRMVLH+GKYE GDRL PEHEKT+LERLLPYHP+ EKK+GCG+DYIT+ YHPD+ESSRCLFIVRKDGELVDFSYWKCIK LI
Subjt:  WVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKSLI

Query:  RKKYPLHAESFILRHF-RRRRNLR
        RK YPL+AESFILRHF RRRRNLR
Subjt:  RKKYPLHAESFILRHF-RRRRNLR

A0A6J1BTU2 protein DCL homolog, chloroplastic2.6e-10083.18Show/hide
Query:  MAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGEED
        MA+AS+ KPPP  PFHSLNPSF  SSPVILCFP H MTS HPS RALKTGPEGSRIRSHEE SSD LRKPVVPPAKD A +SED+E SEESG D + EED
Subjt:  MAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGEED

Query:  WVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKSLI
        WVDWE+ ILEDTVPLV FVRMVLHSGKY  GDRLS EHEKT+L+RLLPYHP+ EKK+GCGIDYITI YHPD+ESSRCLFIVRKDGELVDFSYWKCIK LI
Subjt:  WVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKSLI

Query:  RKKYPLHAESFILRHFRRRR
        RK YPLHAESFILRHFRRRR
Subjt:  RKKYPLHAESFILRHFRRRR

A0A6J1FJS0 protein DCL homolog, chloroplastic-like3.9e-12597.79Show/hide
Query:  MVMAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGE
        MVMAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRAL TGPEGSRIRSHEECSSD LRKPVVPPAKDLAGLSEDEESSEESGDDDD E
Subjt:  MVMAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGE

Query:  EDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKS
        EDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKT+LERLLPYHPKYEKKVGCGIDYIT+RYHPDYESSRCLFIVRKDGELVDFSYWKCIKS
Subjt:  EDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKS

Query:  LIRKKYPLHAESFILRHFRRRRNLRW
        LIRKKYPLHAESFILRHFRRRRNLRW
Subjt:  LIRKKYPLHAESFILRHFRRRRNLRW

A0A6J1IW88 protein DCL homolog, chloroplastic-like2.0e-12497.79Show/hide
Query:  MVMAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGE
        MVMAIASILKPPPSVPFHSL PSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSD LRKPVVPPAKDLAGLSEDEESSEESGDDDD E
Subjt:  MVMAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGE

Query:  EDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKS
        EDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKT+LERLLPYHP YEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKS
Subjt:  EDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKS

Query:  LIRKKYPLHAESFILRHFRRRRNLRW
        LIRKKYPLHAESFILRHFRRRRNLRW
Subjt:  LIRKKYPLHAESFILRHFRRRRNLRW

SwissProt top hitse value%identityAlignment
Q42463 Protein DCL, chloroplastic6.0e-6265.56Show/hide
Query:  ALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGE-----EDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEK
        A+KTG EG  IRS    +++ LRKPV+  + +L   SE EE  +E  DD+ G+     E WVDWE+ ILEDTVPLV FVRM+LHSGKY IGDRLSP+H++
Subjt:  ALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGE-----EDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEK

Query:  TVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKSLIRKKYPLHAESFILRHFRRRR
        T+L+RLLPYHP+ +KK+G G+DYIT+ YHPD+E+SRCLFIVRKDGE VDFSYWKCIK LIRK YPL+A+SFILRHFR+RR
Subjt:  TVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKSLIRKKYPLHAESFILRHFRRRR

Q5D869 DNA-directed RNA polymerase V subunit 11.9e-2039.66Show/hide
Query:  ENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKSLIRKKY
        E  +L D  P++  +R ++H   Y  GD +S + +  VLE++L +HP+ E K+G G+D+IT+  H  +  SRC F+V  DG   DFSY K + + + KKY
Subjt:  ENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKSLIRKKY

Query:  PLHAESFILRHFRRRR
        P  AE FI ++F + R
Subjt:  PLHAESFILRHFRRRR

Q8L557 Protein EMBRYO DEFECTIVE 5144.3e-0432.52Show/hide
Query:  SEDEESSEESGDDDDGEEDWVDWENIILEDTVPLVT----FVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRC
        +E+EE+  ES     GEE+      +  ++ V  V     FV+  LH    ++ D    EH   +L+ +   H + EKK+G GI    +R HP ++ SRC
Subjt:  SEDEESSEESGDDDDGEEDWVDWENIILEDTVPLVT----FVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRC

Query:  LFIVRKDGELVDFSYWKCIKSLI
         F+VR+D    DFS+ KC+  ++
Subjt:  LFIVRKDGELVDFSYWKCIKSLI

Q9C642 Protein DCL homolog, chloroplastic1.2e-6256.71Show/hide
Query:  MAIASILKPPPSVPFHSLNPSF--------FKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESG
        M++ASI   P S P  S  P F        F SSP+ L FP    TS  P  RAL+T  +G++I + E   S+ LR+P +   +     SE+EE  EE  
Subjt:  MAIASILKPPPSVPFHSLNPSF--------FKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESG

Query:  DDDDGEEDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSY
         + D   ++VDWE+ ILE TVPLV FVRM+LHSGKY   DRLSPEHE+T++E LLPYHP+ EKK+GCGIDYI + +HPD+ESSRC+FIVRKDGE+VDFSY
Subjt:  DDDDGEEDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSY

Query:  WKCIKSLIRKKYPLHAESFILRHFRRRRNLR
        WKCIK LI+KKYPL+A+SFILRHFR+RR  R
Subjt:  WKCIKSLIRKKYPLHAESFILRHFRRRRNLR

Arabidopsis top hitse value%identityAlignment
AT1G45230.1 Protein of unknown function (DUF3223)8.5e-6456.71Show/hide
Query:  MAIASILKPPPSVPFHSLNPSF--------FKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESG
        M++ASI   P S P  S  P F        F SSP+ L FP    TS  P  RAL+T  +G++I + E   S+ LR+P +   +     SE+EE  EE  
Subjt:  MAIASILKPPPSVPFHSLNPSF--------FKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESG

Query:  DDDDGEEDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSY
         + D   ++VDWE+ ILE TVPLV FVRM+LHSGKY   DRLSPEHE+T++E LLPYHP+ EKK+GCGIDYI + +HPD+ESSRC+FIVRKDGE+VDFSY
Subjt:  DDDDGEEDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSY

Query:  WKCIKSLIRKKYPLHAESFILRHFRRRRNLR
        WKCIK LI+KKYPL+A+SFILRHFR+RR  R
Subjt:  WKCIKSLIRKKYPLHAESFILRHFRRRRNLR

AT1G45230.2 Protein of unknown function (DUF3223)1.1e-6356.71Show/hide
Query:  MAIASILKPPPSVPFHSLNPSF--------FKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESG
        M++ASI   P S P  S  P F        F SSP+ L FP    TS  P  RAL+T  +G++I + E   S+ LR+P +   +     SE+EE  EE  
Subjt:  MAIASILKPPPSVPFHSLNPSF--------FKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESG

Query:  DDDDGEEDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSY
         + D   ++VDWE+ ILE TVPLV FVRM+LHSGKY   DRLSPEHE+T++E LLPYHP+ EKK+GCGIDYI + +HPD+ESSRC+FIVRKDGE+VDFSY
Subjt:  DDDDGEEDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSY

Query:  WKCIKSLIRKKYPLHAESFILRHFRRRRNLR
        WKCIK LI+KKYPL+A+SFILRHFR+RR  R
Subjt:  WKCIKSLIRKKYPLHAESFILRHFRRRRNLR

AT2G40030.1 nuclear RNA polymerase D1B1.4e-2139.66Show/hide
Query:  ENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKSLIRKKY
        E  +L D  P++  +R ++H   Y  GD +S + +  VLE++L +HP+ E K+G G+D+IT+  H  +  SRC F+V  DG   DFSY K + + + KKY
Subjt:  ENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKSLIRKKY

Query:  PLHAESFILRHFRRRR
        P  AE FI ++F + R
Subjt:  PLHAESFILRHFRRRR

AT3G46630.1 Protein of unknown function (DUF3223)1.9e-3148Show/hide
Query:  DDDGEEDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYW
        +D     W + E  IL D  P+    + +LHS +Y  G+RL  E EK V+E+LLPYHP  + K+GCG+D+I +  HP +  SRCLF+VR DG  +DFSY 
Subjt:  DDDGEEDWVDWENIILEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYW

Query:  KCIKSLIRKKYPLHAESFILRHFRR
        KC+++ +R KYP HAE FI  HF+R
Subjt:  KCIKSLIRKKYPLHAESFILRHFRR

AT5G62440.1 Protein of unknown function (DUF3223)3.1e-0532.52Show/hide
Query:  SEDEESSEESGDDDDGEEDWVDWENIILEDTVPLVT----FVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRC
        +E+EE+  ES     GEE+      +  ++ V  V     FV+  LH    ++ D    EH   +L+ +   H + EKK+G GI    +R HP ++ SRC
Subjt:  SEDEESSEESGDDDDGEEDWVDWENIILEDTVPLVT----FVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRC

Query:  LFIVRKDGELVDFSYWKCIKSLI
         F+VR+D    DFS+ KC+  ++
Subjt:  LFIVRKDGELVDFSYWKCIKSLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCATGGCCATTGCGTCCATTTTGAAGCCACCGCCATCTGTGCCCTTTCACTCCCTAAATCCAAGCTTCTTCAAATCTTCACCAGTCATCTTATGTTTTCCTACACA
TCTAATGACGTCGTTTCATCCATCCACTCGTGCCCTAAAGACTGGCCCTGAAGGCAGTAGAATTCGGAGCCACGAAGAATGTAGCTCCGATTTTCTGCGGAAACCGGTTG
TTCCGCCGGCGAAGGACTTGGCTGGATTATCGGAGGATGAAGAGAGCAGTGAGGAGAGTGGAGATGACGATGACGGGGAAGAGGATTGGGTTGATTGGGAGAACATAATT
TTGGAGGATACAGTTCCTCTCGTTACCTTTGTGAGGATGGTTCTTCACTCTGGAAAATATGAAATTGGGGATAGGTTAAGCCCAGAGCACGAGAAAACAGTTCTCGAAAG
GTTGCTTCCATATCATCCCAAGTATGAGAAGAAGGTTGGATGTGGGATTGATTATATCACGATTAGATATCATCCTGATTATGAAAGCTCAAGATGTTTATTCATCGTCA
GGAAAGATGGTGAATTAGTTGATTTTTCATATTGGAAGTGCATCAAGAGTCTGATCAGAAAGAAGTATCCTCTTCATGCAGAAAGCTTCATTCTTAGGCATTTTCGACGT
AGACGCAATCTCCGTTGGTAA
mRNA sequenceShow/hide mRNA sequence
CGCCAGGCCAGAGGATGCGGATTGAAGAGAAATTCTGTAGTATCTCCAAGTCCATGAGATTCATGATATTGTGACTGACCGTTAATGGTTCTTCTTCCTCCGTTTTCTCA
GAGAAATTGGGAGAAAAACCATGTTCCGTAATCGCAGGCTACAATCTCAATCTCAGTAGTTTCAAATTCAAGCTCCTTGTCTCAATTGAACAAGGGAATGGTCATGGCCA
TTGCGTCCATTTTGAAGCCACCGCCATCTGTGCCCTTTCACTCCCTAAATCCAAGCTTCTTCAAATCTTCACCAGTCATCTTATGTTTTCCTACACATCTAATGACGTCG
TTTCATCCATCCACTCGTGCCCTAAAGACTGGCCCTGAAGGCAGTAGAATTCGGAGCCACGAAGAATGTAGCTCCGATTTTCTGCGGAAACCGGTTGTTCCGCCGGCGAA
GGACTTGGCTGGATTATCGGAGGATGAAGAGAGCAGTGAGGAGAGTGGAGATGACGATGACGGGGAAGAGGATTGGGTTGATTGGGAGAACATAATTTTGGAGGATACAG
TTCCTCTCGTTACCTTTGTGAGGATGGTTCTTCACTCTGGAAAATATGAAATTGGGGATAGGTTAAGCCCAGAGCACGAGAAAACAGTTCTCGAAAGGTTGCTTCCATAT
CATCCCAAGTATGAGAAGAAGGTTGGATGTGGGATTGATTATATCACGATTAGATATCATCCTGATTATGAAAGCTCAAGATGTTTATTCATCGTCAGGAAAGATGGTGA
ATTAGTTGATTTTTCATATTGGAAGTGCATCAAGAGTCTGATCAGAAAGAAGTATCCTCTTCATGCAGAAAGCTTCATTCTTAGGCATTTTCGACGTAGACGCAATCTCC
GTTGGTAA
Protein sequenceShow/hide protein sequence
MVMAIASILKPPPSVPFHSLNPSFFKSSPVILCFPTHLMTSFHPSTRALKTGPEGSRIRSHEECSSDFLRKPVVPPAKDLAGLSEDEESSEESGDDDDGEEDWVDWENII
LEDTVPLVTFVRMVLHSGKYEIGDRLSPEHEKTVLERLLPYHPKYEKKVGCGIDYITIRYHPDYESSRCLFIVRKDGELVDFSYWKCIKSLIRKKYPLHAESFILRHFRR
RRNLRW