; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg10660 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10660
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRNA-binding protein 1-like
Genome locationCarg_Chr01:12083445..12084191
RNA-Seq ExpressionCarg10660
SyntenyCarg10660
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608405.1 RNA-binding protein 1, partial [Cucurbita argyrosperma subsp. sororia]1.7e-112100Show/hide
Query:  KSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTP
        KSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTP
Subjt:  KSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTP

Query:  FPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKDSLVYPTYSSNGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA
        FPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKDSLVYPTYSSNGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA
Subjt:  FPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKDSLVYPTYSSNGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA

KAG7037746.1 RNA-binding protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-140100Show/hide
Query:  MFSSTIVGKETVELAREQRMSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNG
        MFSSTIVGKETVELAREQRMSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNG
Subjt:  MFSSTIVGKETVELAREQRMSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNG

Query:  RRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKDSLV
        RRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKDSLV
Subjt:  RRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKDSLV

Query:  YPTYSSNGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA
        YPTYSSNGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA
Subjt:  YPTYSSNGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA

XP_022940975.1 RNA-binding protein 1-like [Cucurbita moschata]8.6e-12898.25Show/hide
Query:  MSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH
        M NGT MEDQFRGRKIFVGGLSAELTEDDFK+YFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH
Subjt:  MSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH

Query:  ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKDSLVYPTYSSNGLSTPVAGYETA
        ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHK+SLVYPTYSSNGLSTPVAGYETA
Subjt:  ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKDSLVYPTYSSNGLSTPVAGYETA

Query:  DARRKVDPPTRAQKNMSADAVPFHAKDKA
        DARRKVDPPTRAQKNMSADAVPFHAKDKA
Subjt:  DARRKVDPPTRAQKNMSADAVPFHAKDKA

XP_022982410.1 RNA-binding protein 1-like [Cucurbita maxima]5.0e-12897.82Show/hide
Query:  MSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH
        MSNGTRMEDQFRGRKIFVGGLSAELTEDDFK+YFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH
Subjt:  MSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH

Query:  ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKDSLVYPTYSSNGLSTPVAGYETA
        ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWY PNFFGMFPPPHK+SLVYPTYSSNGLSTPVAGYETA
Subjt:  ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKDSLVYPTYSSNGLSTPVAGYETA

Query:  DARRKVDPPTRAQKNMSADAVPFHAKDKA
        DARRKV+PPTRAQKNMSADAVPFHAKD+A
Subjt:  DARRKVDPPTRAQKNMSADAVPFHAKDKA

XP_023524364.1 RNA-binding protein 1-like [Cucurbita pepo subsp. pepo]6.6e-12897.82Show/hide
Query:  MSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH
        MSNGTRMEDQFRGRKIFVGGLSAELTEDDFK+YFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH
Subjt:  MSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH

Query:  ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKDSLVYPTYSSNGLSTPVAGYETA
        ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHK+SLVYPTYSSNGLSTPVAGYETA
Subjt:  ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKDSLVYPTYSSNGLSTPVAGYETA

Query:  DARRKVDPPTRAQKNMSADAVPFHAKDKA
        D RRKV+PP+RAQKNMSADAVPFHAKDKA
Subjt:  DARRKVDPPTRAQKNMSADAVPFHAKDKA

TrEMBL top hitse value%identityAlignment
A0A0A0L563 RRM domain-containing protein8.0e-6357.68Show/hide
Query:  TRME---DQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHI
        TRM+   DQ RGRKIFVGGLSAELTE++F+SYFE FG++TDVVVM DSVT RPRGFGF+TF+S++SVDSVLQ NFHELNGRRVEVKRAIPKKGNYNG HI
Subjt:  TRME---DQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHI

Query:  -----SKSPL--SESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFF--GMFPPPHKDSLVYPTY-----SS
             +KSPL     NV   YPYY  GY +YPGFT FP YG     YGS+ YGNWF P    +AS   W+ PNFF  GM PP  ++SL++P+      S 
Subjt:  -----SKSPL--SESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFF--GMFPPPHKDSLVYPTY-----SS

Query:  NGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDK
        NG++    G        ++   T  ++ MSADA PF  KD+
Subjt:  NGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDK

A0A5N6R9D7 Uncharacterized protein1.3e-4148.8Show/hide
Query:  LAREQRMSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKG
        L++     NG   ++QFR +KIFVGGLSA LTE++FK+YF++FGRVTDVVVM DS T RPRGFGFITFDS +SV++V+QN+FHELNGR VEVKRA+PK+ 
Subjt:  LAREQRMSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKG

Query:  NYNGGHISKSPLSESNVLP-SYPYYSCGYTVYPGFTPFPPY-GPGFGLYGSDPYGNWFSPSFG---------PMASPAAWYAPNFF--GMFPPPHKDSLV
        N        + +      P S+P YS  Y + PG+ PFP + G G  LYG+  Y  W+ PS G         P+A    WY P     G FP P   + +
Subjt:  NYNGGHISKSPLSESNVLP-SYPYYSCGYTVYPGFTPFPPY-GPGFGLYGSDPYGNWFSPSFG---------PMASPAAWYAPNFF--GMFPPPHKDSLV

Query:  YPTYSSNGL
        YP Y + G+
Subjt:  YPTYSSNGL

A0A6J1C724 RNA-binding protein 1-like1.0e-5454.73Show/hide
Query:  NGTRME---DQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGG
        +  RME   DQ RG+KIFVGGL ++LTE++FKSYFEKFG++TDVVVM+DSVT RPRGFGFITFDSV+SV+ VLQNNFHELNGRRVEVKRA+PK  N N  
Subjt:  NGTRME---DQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGG

Query:  H--ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNW-FSPSFG------PMASPAAWYAPNFF--GMFPPPHKDSLVYPTYSSN
        +    KSPLS  +V   YP++S G  VYPG+ PFP Y      YGS  YG+W ++  +G      P+   +AWYAPN F  GMFP P+ +S+++P YSS 
Subjt:  H--ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNW-FSPSFG------PMASPAAWYAPNFF--GMFPPPHKDSLVYPTYSSN

Query:  G--LSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA
        G  L  P+AG              R   NMSADAVPF   ++A
Subjt:  G--LSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA

A0A6J1FS87 RNA-binding protein 1-like4.2e-12898.25Show/hide
Query:  MSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH
        M NGT MEDQFRGRKIFVGGLSAELTEDDFK+YFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH
Subjt:  MSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH

Query:  ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKDSLVYPTYSSNGLSTPVAGYETA
        ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHK+SLVYPTYSSNGLSTPVAGYETA
Subjt:  ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKDSLVYPTYSSNGLSTPVAGYETA

Query:  DARRKVDPPTRAQKNMSADAVPFHAKDKA
        DARRKVDPPTRAQKNMSADAVPFHAKDKA
Subjt:  DARRKVDPPTRAQKNMSADAVPFHAKDKA

A0A6J1J2K5 RNA-binding protein 1-like2.4e-12897.82Show/hide
Query:  MSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH
        MSNGTRMEDQFRGRKIFVGGLSAELTEDDFK+YFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH
Subjt:  MSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH

Query:  ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKDSLVYPTYSSNGLSTPVAGYETA
        ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWY PNFFGMFPPPHK+SLVYPTYSSNGLSTPVAGYETA
Subjt:  ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKDSLVYPTYSSNGLSTPVAGYETA

Query:  DARRKVDPPTRAQKNMSADAVPFHAKDKA
        DARRKV+PPTRAQKNMSADAVPFHAKD+A
Subjt:  DARRKVDPPTRAQKNMSADAVPFHAKDKA

SwissProt top hitse value%identityAlignment
P22626 Heterogeneous nuclear ribonucleoproteins A2/B15.2e-1943.59Show/hide
Query:  ETVELAREQRMSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAI
        ETV L R++      R ++QF  RK+F+GGLS E TE+  ++Y+E++G++TD VVMRD  +KR RGFGF+TF S+  VD+ +    H ++GR VE KRA+
Subjt:  ETVELAREQRMSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAI

Query:  PK-KGNYNGGHISKSPL
         + +    G H++   L
Subjt:  PK-KGNYNGGHISKSPL

Q8W034 Heterogeneous nuclear ribonucleoprotein 14.1e-2445.71Show/hide
Query:  RKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLP
        +KIFVGGL   LT+++F+ YFE +G VTDV +M D  T RPRGFGF++FDS  +VDSVL   FH+L+G++VEVKRA+PK  N  GG  S           
Subjt:  RKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLP

Query:  SYPYYSCGYTVYPG------FTPFPPYGPGFGLYGSDPYG
         Y  Y    + Y G      F      G G   YGS  YG
Subjt:  SYPYYSCGYTVYPG------FTPFPPYGPGFGLYGSDPYG

Q96EP5 DAZ-associated protein 15.2e-1937.57Show/hide
Query:  DQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSE
        D  +  KIFVGG+     E + + YF+KFG VT+VV++ D+  +RPRGFGFITF+  QSVD  +  +FH++ G++VEVKRA P+           +    
Subjt:  DQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSE

Query:  SNVLPSYPYYSCGY---TVYPGFTP---FPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPP
        S V+P+      G    T   G+ P   + P G   G YG  P G    P   P  S      P   G FPPP
Subjt:  SNVLPSYPYYSCGY---TVYPGFTP---FPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPP

Q9C652 RNA-binding protein 12.5e-2942.72Show/hide
Query:  QRMSNGTRMEDQ----FRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKG
        Q+M+ G R         R +KIFVGGLS+  TE++FKSYFE+FGR TDVVVM D VT RPRGFGF+T+DS  SV+ V+Q+NFHEL+ +RVEVKRAIPK+G
Subjt:  QRMSNGTRMEDQ----FRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKG

Query:  --NYNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSD-PYGNWFSPSFGPMASPAAWYAPNFFGMFP----PPHKDSLVYPTYSS
          + NG  ++  P   S     Y     GY +   F P P +G    +     PYG  F+     ++       P  F   P    PP  ++L Y  Y  
Subjt:  --NYNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSD-PYGNWFSPSFGPMASPAAWYAPNFFGMFP----PPHKDSLVYPTYSS

Query:  NGL---STPVAGY
        NG     T ++GY
Subjt:  NGL---STPVAGY

Q9JII5 DAZ-associated protein 14.0e-1938.15Show/hide
Query:  DQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSE
        D  +  KIFVGG+     E + + YF+KFG VT+VV++ D+  +RPRGFGFITF+  QSVD  +  +FH++ G++VEVKRA P+           +    
Subjt:  DQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSE

Query:  SNVLPSYPYYSCGY---TVYPGFTP---FPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPP
        S V PS      G    T   G+ P   + P G   G YG  P G    P   P  S      P   G FPPP
Subjt:  SNVLPSYPYYSCGY---TVYPGFTP---FPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPP

Arabidopsis top hitse value%identityAlignment
AT1G58470.1 RNA-binding protein 11.8e-3042.72Show/hide
Query:  QRMSNGTRMEDQ----FRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKG
        Q+M+ G R         R +KIFVGGLS+  TE++FKSYFE+FGR TDVVVM D VT RPRGFGF+T+DS  SV+ V+Q+NFHEL+ +RVEVKRAIPK+G
Subjt:  QRMSNGTRMEDQ----FRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKG

Query:  --NYNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSD-PYGNWFSPSFGPMASPAAWYAPNFFGMFP----PPHKDSLVYPTYSS
          + NG  ++  P   S     Y     GY +   F P P +G    +     PYG  F+     ++       P  F   P    PP  ++L Y  Y  
Subjt:  --NYNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSD-PYGNWFSPSFGPMASPAAWYAPNFFGMFP----PPHKDSLVYPTYSS

Query:  NGL---STPVAGY
        NG     T ++GY
Subjt:  NGL---STPVAGY

AT5G55550.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.7e-2850Show/hide
Query:  RGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSE-SN
        R +KIFVGGL + +TE++FK+YF++FG + DVVVM D  T+RPRGFGFITFDS  +VD VL   FHELNG+ VEVKRA+PK+          SP+S   +
Subjt:  RGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSE-SN

Query:  VLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGS-DPYGNWFSPSFG
         L S   Y  G    P  + F  + PG G Y S  P G  FSP  G
Subjt:  VLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGS-DPYGNWFSPSFG

AT5G55550.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.7e-2850Show/hide
Query:  RGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSE-SN
        R +KIFVGGL + +TE++FK+YF++FG + DVVVM D  T+RPRGFGFITFDS  +VD VL   FHELNG+ VEVKRA+PK+          SP+S   +
Subjt:  RGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSE-SN

Query:  VLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGS-DPYGNWFSPSFG
         L S   Y  G    P  + F  + PG G Y S  P G  FSP  G
Subjt:  VLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGS-DPYGNWFSPSFG

AT5G55550.3 RNA-binding (RRM/RBD/RNP motifs) family protein3.7e-2850Show/hide
Query:  RGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSE-SN
        R +KIFVGGL + +TE++FK+YF++FG + DVVVM D  T+RPRGFGFITFDS  +VD VL   FHELNG+ VEVKRA+PK+          SP+S   +
Subjt:  RGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSE-SN

Query:  VLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGS-DPYGNWFSPSFG
         L S   Y  G    P  + F  + PG G Y S  P G  FSP  G
Subjt:  VLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGS-DPYGNWFSPSFG

AT5G55550.4 RNA-binding (RRM/RBD/RNP motifs) family protein3.7e-2850Show/hide
Query:  RGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSE-SN
        R +KIFVGGL + +TE++FK+YF++FG + DVVVM D  T+RPRGFGFITFDS  +VD VL   FHELNG+ VEVKRA+PK+          SP+S   +
Subjt:  RGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSE-SN

Query:  VLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGS-DPYGNWFSPSFG
         L S   Y  G    P  + F  + PG G Y S  P G  FSP  G
Subjt:  VLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGS-DPYGNWFSPSFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTCGTCCACAATCGTAGGAAAAGAAACTGTGGAGCTAGCTAGAGAACAAAGAATGAGTAATGGTACTAGGATGGAAGATCAATTTAGGGGCAGAAAGATTTTTGT
TGGAGGATTATCGGCTGAATTGACTGAAGATGACTTCAAAAGTTACTTTGAAAAGTTTGGTCGGGTAACTGACGTAGTCGTGATGCGTGATAGTGTAACTAAACGCCCTA
GAGGATTTGGATTTATCACGTTTGATTCTGTACAATCCGTTGACTCTGTTCTTCAAAATAATTTTCATGAGTTAAATGGTAGGCGTGTGGAGGTGAAGAGAGCCATCCCA
AAAAAGGGGAACTACAATGGCGGCCATATTTCCAAAAGCCCTCTTTCTGAAAGCAATGTTCTTCCCTCTTACCCATATTATAGCTGTGGTTATACAGTTTATCCTGGTTT
TACACCTTTTCCACCTTATGGACCAGGTTTTGGTTTATATGGCTCAGACCCCTATGGGAATTGGTTTTCCCCCAGCTTTGGTCCCATGGCTTCACCAGCTGCATGGTATG
CTCCAAATTTCTTTGGAATGTTTCCTCCACCTCATAAAGATTCTCTAGTTTATCCAACGTATTCAAGCAACGGGCTATCTACTCCGGTGGCTGGATATGAAACTGCTGAT
GCGAGAAGAAAGGTTGATCCCCCCACTCGTGCACAGAAAAATATGTCGGCTGACGCAGTGCCATTTCATGCTAAGGATAAAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTCGTCCACAATCGTAGGAAAAGAAACTGTGGAGCTAGCTAGAGAACAAAGAATGAGTAATGGTACTAGGATGGAAGATCAATTTAGGGGCAGAAAGATTTTTGT
TGGAGGATTATCGGCTGAATTGACTGAAGATGACTTCAAAAGTTACTTTGAAAAGTTTGGTCGGGTAACTGACGTAGTCGTGATGCGTGATAGTGTAACTAAACGCCCTA
GAGGATTTGGATTTATCACGTTTGATTCTGTACAATCCGTTGACTCTGTTCTTCAAAATAATTTTCATGAGTTAAATGGTAGGCGTGTGGAGGTGAAGAGAGCCATCCCA
AAAAAGGGGAACTACAATGGCGGCCATATTTCCAAAAGCCCTCTTTCTGAAAGCAATGTTCTTCCCTCTTACCCATATTATAGCTGTGGTTATACAGTTTATCCTGGTTT
TACACCTTTTCCACCTTATGGACCAGGTTTTGGTTTATATGGCTCAGACCCCTATGGGAATTGGTTTTCCCCCAGCTTTGGTCCCATGGCTTCACCAGCTGCATGGTATG
CTCCAAATTTCTTTGGAATGTTTCCTCCACCTCATAAAGATTCTCTAGTTTATCCAACGTATTCAAGCAACGGGCTATCTACTCCGGTGGCTGGATATGAAACTGCTGAT
GCGAGAAGAAAGGTTGATCCCCCCACTCGTGCACAGAAAAATATGTCGGCTGACGCAGTGCCATTTCATGCTAAGGATAAAGCTTGA
Protein sequenceShow/hide protein sequence
MFSSTIVGKETVELAREQRMSNGTRMEDQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIP
KKGNYNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKDSLVYPTYSSNGLSTPVAGYETAD
ARRKVDPPTRAQKNMSADAVPFHAKDKA