CuGenDBv2

Gene ID	Carg10722
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Fatty-acid-binding protein 2
Genome location	Carg_Chr01:11775778..11777154
RNA-Seq Expression	Carg10722
Synteny	Carg10722
Gene Ontology terms	GO:0009813 - flavonoid biosynthetic process (biological process) GO:0009570 - chloroplast stroma (cellular component) GO:0005504 - fatty acid binding (molecular function) GO:0016872 - intramolecular lyase activity (molecular function)
InterPro domains	IPR016088 - Chalcone isomerase, 3-layer sandwich IPR036298 - Chalcone isomerase superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7037685.1 Fatty-acid-binding protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.9e-56

100

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Query:  MLLKLIDDHALILCCSAFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKTNGGCCTVGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRN
        MLLKLIDDHALILCCSAFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKTNGGCCTVGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRN
Subjt:  MLLKLIDDHALILCCSAFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKTNGGCCTVGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRN

Query:  VASLIGRC
        VASLIGRC
Subjt:  VASLIGRC

XP_004141346.2 fatty-acid-binding protein 2 isoform X2 [Cucumis sativus]

3.7e-35

79.21

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Query:  AFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKT--------NGGCCT-VGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGR
        AFEKSLRARLLKANPETDY CVRTFGSLFTKDIPLP+ T        +G   T +GGTLIGAVRSKELCRAFFD+YLGD PVSEETKKEIG+NVA LIGR
Subjt:  AFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKT--------NGGCCT-VGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGR

Query:  C
        C
Subjt:  C

XP_022941337.1 fatty-acid-binding protein 2 isoform X1 [Cucurbita moschata]

2.8e-38

85.15

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Query:  AFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKT--------NGGCCT-VGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGR
        AFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPL T        +G   T +GGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGR
Subjt:  AFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKT--------NGGCCT-VGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGR

Query:  C
        C
Subjt:  C

XP_022982364.1 fatty-acid-binding protein 2 isoform X1 [Cucurbita maxima]

2.8e-38

85.15

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Query:  AFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKT--------NGGCCT-VGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGR
        AFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPL T        +G   T +GGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGR
Subjt:  AFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKT--------NGGCCT-VGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGR

Query:  C
        C
Subjt:  C

XP_023524211.1 fatty-acid-binding protein 2 [Cucurbita pepo subsp. pepo]

2.8e-38

85.15

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Query:  AFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKT--------NGGCCT-VGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGR
        AFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPL T        +G   T +GGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGR
Subjt:  AFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKT--------NGGCCT-VGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGR

Query:  C
        C
Subjt:  C

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L0W4 Chalcone_isomerase domain-containing protein

1.8e-35

79.21

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Query:  AFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKT--------NGGCCT-VGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGR
        AFEKSLRARLLKANPETDY CVRTFGSLFTKDIPLP+ T        +G   T +GGTLIGAVRSKELCRAFFD+YLGD PVSEETKKEIG+NVA LIGR
Subjt:  AFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKT--------NGGCCT-VGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGR

Query:  C
        C
Subjt:  C

A0A1S3BUQ0 LOW QUALITY PROTEIN: fatty-acid-binding protein 2

9.0e-35

78.22

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Query:  AFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKT--------NGGCCT-VGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGR
        AFEKSLRARLLKANPETDY CVRTFGSLFTKDIPLP+ T        +G   T +GGTLIGAVRSKELCRAFFD+YLGD PVSEETK EIG+NVA LIGR
Subjt:  AFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKT--------NGGCCT-VGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGR

Query:  C
        C
Subjt:  C

A0A5D3D917 Fatty-acid-binding protein 2

1.8e-35

79.21

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Query:  AFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKT--------NGGCCT-VGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGR
        AFEKSLRARLLKANPETDY CVRTFGSLFTKDIPLP+ T        +G   T +GGTLIGAVRSKELCRAFFD+YLGD PVSEETKKEIG+NVA LIGR
Subjt:  AFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKT--------NGGCCT-VGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGR

Query:  C
        C
Subjt:  C

A0A6J1FN23 fatty-acid-binding protein 2 isoform X1

1.3e-38

85.15

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Query:  AFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKT--------NGGCCT-VGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGR
        AFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPL T        +G   T +GGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGR
Subjt:  AFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKT--------NGGCCT-VGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGR

Query:  C
        C
Subjt:  C

A0A6J1J4B9 fatty-acid-binding protein 2 isoform X1

1.3e-38

85.15

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Query:  AFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKT--------NGGCCT-VGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGR
        AFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPL T        +G   T +GGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGR
Subjt:  AFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKT--------NGGCCT-VGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGR

Query:  C
        C
Subjt:  C

SwissProt top hits

e value

%identity

Alignment

Q84RK2 Fatty-acid-binding protein 2

2.7e-28

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Query:  FEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKT--------NGGCCT-VGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGRC
        FEKSLRARL+KANP+TD++C+  FGS F +DIP+P  T        +G   T +GG LIGAVRSK+LCRAFF +Y+GD PVSE+TK+EIGR V  +I RC
Subjt:  FEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKT--------NGGCCT-VGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGRC

Arabidopsis top hits

e value

%identity

Alignment

AT2G26310.1 Chalcone-flavanone isomerase family protein

1.9e-29

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Query:  FEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKT--------NGGCCT-VGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGRC
        FEKSLRARL+KANP+TD++C+  FGS F +DIP+P  T        +G   T +GG LIGAVRSK+LCRAFF +Y+GD PVSE+TK+EIGR V  +I RC
Subjt:  FEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKT--------NGGCCT-VGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGRC

AT2G26310.2 Chalcone-flavanone isomerase family protein

3.4e-18

54.35

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Query:  FEKSLRARLLKANPETDYDCVRT-FGSLFTKDIPLPLKTNGGCCTVGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGRC
        FEKSLRARL+K    T  D  RT  G L T+              +GG LIGAVRSK+LCRAFF +Y+GD PVSE+TK+EIGR V  +I RC
Subjt:  FEKSLRARLLKANPETDYDCVRT-FGSLFTKDIPLPLKTNGGCCTVGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGRC

AT2G26310.3 Chalcone-flavanone isomerase family protein

1.9e-29

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Query:  FEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKT--------NGGCCT-VGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGRC
        FEKSLRARL+KANP+TD++C+  FGS F +DIP+P  T        +G   T +GG LIGAVRSK+LCRAFF +Y+GD PVSE+TK+EIGR V  +I RC
Subjt:  FEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKT--------NGGCCT-VGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGRC

Sequences

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CDS sequence

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mRNA sequence

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ATGTTACTCAAGCTAATTGATGATCATGCTCTGATTCTCTGTTGCAGTGCTTTTGAGAAATCACTTAGAGCACGATTGTTGAAGGCAAATCCAGAAACTGATTACGATTG
TGTGAGGACATTTGGTTCTCTCTTCACCAAAGACATTCCATTACCTTTGAAGACTAATGGTGGTTGTTGCACAGTGGGAGGCACTCTGATTGGAGCAGTTCGTAGCAAGG
AATTGTGTAGGGCGTTCTTTGATGTTTACCTTGGCGACTTTCCAGTGTCGGAGGAAACGAAAAAAGAGATCGGTAGAAATGTGGCAAGTCTTATTGGTAGATGCTGACTA
ACATCTTTGTTCTAAAATTGTTCTGAAGTACAAGAGCTTCCATTGCCCCTCATTTTATATGGACAATTGGTTGCTGTGACATGAAAAACTGGTGGCAATCTTTGGCATTA
ACAAGATCATCACTTGGTTTTGCACTCAAAAGCTGGCAATAGCGGTTGAGATCTAGTACATATTTG

Protein sequence

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MLLKLIDDHALILCCSAFEKSLRARLLKANPETDYDCVRTFGSLFTKDIPLPLKTNGGCCTVGGTLIGAVRSKELCRAFFDVYLGDFPVSEETKKEIGRNVASLIGRC

Carg10722 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome