; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg10730 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10730
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionsterile alpha motif (SAM) domain-containing protein
Genome locationCarg_Chr01:11738057..11738775
RNA-Seq ExpressionCarg10730
SyntenyCarg10730
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608328.1 hypothetical protein SDJN03_01670, partial [Cucurbita argyrosperma subsp. sororia]4.1e-4689.81Show/hide
Query:  PPPMTTTTIFFLPPIQSSSRGLRPRNLRLIAPHLRIQEAEAFGSNRHWQGLNPLSTWRMANTSANYNFTNQKDVTILFVDAIEVEAFNSKTLFLIGCYTI
        PP  TTTTIFFLPPIQSSSRGLRPRNLRLIAPHLRIQEAEAFGSNRHWQGLN LS WRMANTSANYNFTNQKDVTILFVDAIEVEAFNSKTLFLIGCYTI
Subjt:  PPPMTTTTIFFLPPIQSSSRGLRPRNLRLIAPHLRIQEAEAFGSNRHWQGLNPLSTWRMANTSANYNFTNQKDVTILFVDAIEVEAFNSKTLFLIGCYTI

Query:  VDIEMNII
          I ++++
Subjt:  VDIEMNII
KAG7037677.1 hypothetical protein SDJN02_01307, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-62100Show/hide
Query:  MPPPMTTTTIFFLPPIQSSSRGLRPRNLRLIAPHLRIQEAEAFGSNRHWQGLNPLSTWRMANTSANYNFTNQKDVTILFVDAIEVEAFNSKTLFLIGCYT
        MPPPMTTTTIFFLPPIQSSSRGLRPRNLRLIAPHLRIQEAEAFGSNRHWQGLNPLSTWRMANTSANYNFTNQKDVTILFVDAIEVEAFNSKTLFLIGCYT
Subjt:  MPPPMTTTTIFFLPPIQSSSRGLRPRNLRLIAPHLRIQEAEAFGSNRHWQGLNPLSTWRMANTSANYNFTNQKDVTILFVDAIEVEAFNSKTLFLIGCYT

Query:  IVDIEMNIIKLSRVELNQICRFK
        IVDIEMNIIKLSRVELNQICRFK
Subjt:  IVDIEMNIIKLSRVELNQICRFK
XP_022940002.1 uncharacterized protein LOC111445765 [Cucurbita moschata]1.2e-4891.89Show/hide
Query:  MPPPMTTTTIFFLPPIQSSSRGLRPRNLRLIAPHLRIQEAEAFGSNRHWQGLNPLSTWRMANTSANYNFTNQKDVTILFVDAIEVEAFNSKTLFLIGCYT
        MPPPMTTTTIFFLPPIQSSSRGLRPRNLRLIAP  R QEAEAFG NRHWQGLNP S WRMANTSANYN TNQKDVTILFVDAI VEAFNSKTLFLIGCYT
Subjt:  MPPPMTTTTIFFLPPIQSSSRGLRPRNLRLIAPHLRIQEAEAFGSNRHWQGLNPLSTWRMANTSANYNFTNQKDVTILFVDAIEVEAFNSKTLFLIGCYT

Query:  IVDIEMNIIKL
        IVDIE+NIIKL
Subjt:  IVDIEMNIIKL
XP_023524427.1 uncharacterized protein LOC111788332 [Cucurbita pepo subsp. pepo]9.1e-5491.87Show/hide
Query:  MPPPMTTTTIFFLPPIQSSSRGLRPRNLRLIAPHLRIQEAEAFGSNRHWQGLNPLSTWRMANTSANYNFTNQKDVTILFVDAIEVEAFNSKTLFLIGCYT
        MPPPMTTTTIFFLP IQSSSR LR RNL   APH R QEAEAFG NRHWQGLNPLS WRMANTSANYNFTNQKDVTILFVDAIEVEAFNSKTLFLIGCYT
Subjt:  MPPPMTTTTIFFLPPIQSSSRGLRPRNLRLIAPHLRIQEAEAFGSNRHWQGLNPLSTWRMANTSANYNFTNQKDVTILFVDAIEVEAFNSKTLFLIGCYT

Query:  IVDIEMNIIKLSRVELNQICRFK
        IVDIEMNIIKLSRVELNQICRFK
Subjt:  IVDIEMNIIKLSRVELNQICRFK
TrEMBL top hitse value%identityAlignment
A0A6J1FIF4 uncharacterized protein LOC1114457655.6e-4991.89Show/hide
Query:  MPPPMTTTTIFFLPPIQSSSRGLRPRNLRLIAPHLRIQEAEAFGSNRHWQGLNPLSTWRMANTSANYNFTNQKDVTILFVDAIEVEAFNSKTLFLIGCYT
        MPPPMTTTTIFFLPPIQSSSRGLRPRNLRLIAP  R QEAEAFG NRHWQGLNP S WRMANTSANYN TNQKDVTILFVDAI VEAFNSKTLFLIGCYT
Subjt:  MPPPMTTTTIFFLPPIQSSSRGLRPRNLRLIAPHLRIQEAEAFGSNRHWQGLNPLSTWRMANTSANYNFTNQKDVTILFVDAIEVEAFNSKTLFLIGCYT

Query:  IVDIEMNIIKL
        IVDIE+NIIKL
Subjt:  IVDIEMNIIKL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G45700.1 sterile alpha motif (SAM) domain-containing protein3.2e-0460Show/hide
Query:  YNFTNQKDVTILFVDAIEVEAFNSKTLFLIGCYTI
        Y+F  Q+ V    V+AI+ EAFN KTLFLIG YTI
Subjt:  YNFTNQKDVTILFVDAIEVEAFNSKTLFLIGCYTI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCCGCCGATGACGACGACGACGATCTTCTTCCTTCCACCCATACAGTCTTCTTCTCGCGGTCTTAGACCTCGCAATCTCCGACTTATCGCTCCACACTTGCGCAT
TCAAGAGGCCGAAGCGTTCGGCTCCAATCGCCACTGGCAAGGACTCAATCCTTTGAGTACATGGAGAATGGCCAATACTTCTGCAAATTATAATTTCACGAATCAGAAGG
ACGTTACAATTTTGTTTGTTGATGCCATTGAGGTTGAAGCTTTCAACTCAAAAACTCTGTTCCTGATTGGATGCTATACCATCGTTGATATTGAAATGAACATAATAAAG
CTTTCGAGGGTTGAGCTGAATCAAATCTGCAGATTCAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCGCCGCCGATGACGACGACGACGATCTTCTTCCTTCCACCCATACAGTCTTCTTCTCGCGGTCTTAGACCTCGCAATCTCCGACTTATCGCTCCACACTTGCGCAT
TCAAGAGGCCGAAGCGTTCGGCTCCAATCGCCACTGGCAAGGACTCAATCCTTTGAGTACATGGAGAATGGCCAATACTTCTGCAAATTATAATTTCACGAATCAGAAGG
ACGTTACAATTTTGTTTGTTGATGCCATTGAGGTTGAAGCTTTCAACTCAAAAACTCTGTTCCTGATTGGATGCTATACCATCGTTGATATTGAAATGAACATAATAAAG
CTTTCGAGGGTTGAGCTGAATCAAATCTGCAGATTCAAGTAAGTTAAAAACTAAGCTACTACTGGCTCTCTTTTAGATAATCATTTTATATAATC
Protein sequenceShow/hide protein sequence
MPPPMTTTTIFFLPPIQSSSRGLRPRNLRLIAPHLRIQEAEAFGSNRHWQGLNPLSTWRMANTSANYNFTNQKDVTILFVDAIEVEAFNSKTLFLIGCYTIVDIEMNIIK
LSRVELNQICRFK