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Carg10886 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10886
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr05:11529119..11532819
RNA-Seq ExpressionCarg10886
SyntenyCarg10886
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599415.1 hypothetical protein SDJN03_09193, partial [Cucurbita argyrosperma subsp. sororia]4.5e-20100Show/hide
Query:  MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLA
        MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLA
Subjt:  MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLA
KAG7030405.1 hypothetical protein SDJN02_08752 [Cucurbita argyrosperma subsp. argyrosperma]9.0e-53100Show/hide
Query:  MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAEVISMMLRASELNSPSPHDHDHDHDDACSRNRKPAEMRRPNGTF
        MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAEVISMMLRASELNSPSPHDHDHDHDDACSRNRKPAEMRRPNGTF
Subjt:  MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAEVISMMLRASELNSPSPHDHDHDHDDACSRNRKPAEMRRPNGTF

Query:  RPENNRFSTS
        RPENNRFSTS
Subjt:  RPENNRFSTS
XP_022946445.1 uncharacterized protein LOC111450499 [Cucurbita moschata]1.0e-1998.21Show/hide
Query:  MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLA
        MAAPFDSNSREAVPK+RSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLA
Subjt:  MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLA
XP_022999556.1 uncharacterized protein LOC111493883 [Cucurbita maxima]5.0e-1994.64Show/hide
Query:  MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLA
        MAAPFDSNSRE VPKKRSAPIKFLVPL+YAPVLPLIRIALRKNPV+RDRLFTAVLA
Subjt:  MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLA
XP_023546130.1 uncharacterized protein LOC111805333 [Cucurbita pepo subsp. pepo]5.9e-2098.21Show/hide
Query:  MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLA
        MAAPFDSNSREAVPKKRSAPIKFLVPL+YAPVLPLIRIALRKNPVMRDRLFTAVLA
Subjt:  MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLA
TrEMBL top hitse value%identityAlignment
A0A6J1CPL9 uncharacterized protein LOC1110131381.2e-1583.93Show/hide
Query:  MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLA
        MAAP+D  +REAV KK+ APIKFLVPL+YAPVLPLIRIALRKNPV+RDRLFTAVLA
Subjt:  MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLA
A0A6J1FDN8 uncharacterized protein LOC1114444361.5e-1685.71Show/hide
Query:  MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLA
        MA+P+D  SREA PKK+SAP KFLVPLIYAPVLPLIRIALRKNPV+RDRLFTAVLA
Subjt:  MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLA
A0A6J1G3Q4 uncharacterized protein LOC1114504994.9e-2098.21Show/hide
Query:  MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLA
        MAAPFDSNSREAVPK+RSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLA
Subjt:  MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLA
A0A6J1HSI9 uncharacterized protein LOC1114657381.5e-1685.71Show/hide
Query:  MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLA
        MA+P+D  SREA PKK+SAP KFLVPLIYAPVLPLIRIALRKNPV+RDRLFTAVLA
Subjt:  MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLA
A0A6J1KDE7 uncharacterized protein LOC1114938832.4e-1994.64Show/hide
Query:  MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLA
        MAAPFDSNSRE VPKKRSAPIKFLVPL+YAPVLPLIRIALRKNPV+RDRLFTAVLA
Subjt:  MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68680.1 unknown protein6.9e-1161.82Show/hide
Query:  MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVL
        MA+  D +      KK+ APIKFLVPLIYAP LPLIR++LR  PV+RDRLF  VL
Subjt:  MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCGCCCTTCGATTCCAATTCTCGGGAGGCTGTTCCGAAGAAGCGATCAGCTCCAATCAAGTTCTTGGTTCCTCTGATTTATGCCCCTGTTCTTCCTCTCATCAG
AATTGCGCTGCGGAAGAACCCTGTTATGAGGGATCGGCTGTTCACGGCGGTTTTGGCTGAAGTGATATCTATGATGCTGAGAGCAAGTGAACTCAATTCCCCATCTCCAC
ATGATCATGATCATGATCATGATGATGCTTGTTCGAGAAATCGGAAGCCAGCCGAGATGCGACGCCCGAATGGTACATTCCGTCCTGAAAACAATCGGTTTTCGACGTCA
TAA
mRNA sequenceShow/hide mRNA sequence
CATCAAATCGACAGCCGCCGGTTCCGCCTCCGCCATGGCCGCGCCCTTCGATTCCAATTCTCGGGAGGCTGTTCCGAAGAAGCGATCAGCTCCAATCAAGTTCTTGGTTC
CTCTGATTTATGCCCCTGTTCTTCCTCTCATCAGAATTGCGCTGCGGAAGAACCCTGTTATGAGGGATCGGCTGTTCACGGCGGTTTTGGCTGAAGTGATATCTATGATG
CTGAGAGCAAGTGAACTCAATTCCCCATCTCCACATGATCATGATCATGATCATGATGATGCTTGTTCGAGAAATCGGAAGCCAGCCGAGATGCGACGCCCGAATGGTAC
ATTCCGTCCTGAAAACAATCGGTTTTCGACGTCATAATTCGGAGTTGCCTCGCTTTCTCTGCTGTTAAGCCACCGGGAGAGAATCGGCTCCCCGCTGCCTTCTCTGCCGA
ATTCGAATCCGAATTAGGATTTGGCTGCGCACCCTCGGTGATTTTGTTCGGCGGGCAAGGTTTCCACCAGGGCCTGTAATGGCGCTGGGGATCTGATTTCCGGTGACCGG
TGCCGGCGCTGGCAGAGGGTCGGATTCCGATGGGGCGGAAGACGAGTAGATTGGTGGTCATTTTTTTGGGGAGTGGAAGGTATGAATTGGTTGGCTTTTAACCTTGTAAT
TATATCCAAATAAAGATATCATAATAATAGTTAATTTCTATTCCACAAAA
Protein sequenceShow/hide protein sequence
MAAPFDSNSREAVPKKRSAPIKFLVPLIYAPVLPLIRIALRKNPVMRDRLFTAVLAEVISMMLRASELNSPSPHDHDHDHDDACSRNRKPAEMRRPNGTFRPENNRFSTS