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Carg10887 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10887
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPlant/protein
Genome locationCarg_Chr05:11532370..11532720
RNA-Seq ExpressionCarg10887
SyntenyCarg10887
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061584.1 hypothetical protein E6C27_scaffold41G001490 [Cucumis melo var. makuwa]5.6e-2155.26Show/hide
Query:  MTTNLLVFRPIGIRPSASAG--TGHRKSDPQRHYRPWWKPCPPNKITEGAQPNPNSDSNSAEKAAGSRFSPGGLTAEKARQLRIMTSKTDCFQDGMYHSG
        MTTNLL+FRPI I+ SA++G  +GHRK  P R  RP W+P  P+ I++  +P    D +S E+   S+ S G  T EKA+QLRIMT+K + F DGMYHS 
Subjt:  MTTNLLVFRPIGIRPSASAG--TGHRKSDPQRHYRPWWKPCPPNKITEGAQPNPNSDSNSAEKAAGSRFSPGGLTAEKARQLRIMTSKTDCFQDGMYHSG

Query:  VASRLASDFSNTKN
        +ASRLASDFSNT N
Subjt:  VASRLASDFSNTKN

KAG6599416.1 hypothetical protein SDJN03_09194, partial [Cucurbita argyrosperma subsp. sororia]2.3e-5999.14Show/hide
Query:  MTTNLLVFRPIGIRPSASAGTGHRKSDPQRHYRPWWKPCPPNKITEGAQPNPNSDSNSAEKAAGSRFSPGGLTAEKARQLRIMTSKTDCFQDGMYHSGVA
        MTTNLLVFRPIGIRPSASAGTGHRKSDPQRHYRPWWKPCPPNKITEGAQPNPNSD NSAEKAAGSRFSPGGLTAEKARQLRIMTSKTDCFQDGMYHSGVA
Subjt:  MTTNLLVFRPIGIRPSASAGTGHRKSDPQRHYRPWWKPCPPNKITEGAQPNPNSDSNSAEKAAGSRFSPGGLTAEKARQLRIMTSKTDCFQDGMYHSGVA

Query:  SRLASDFSNTKNDTGK
        SRLASDFSNTKNDTGK
Subjt:  SRLASDFSNTKNDTGK

KAG7030406.1 hypothetical protein SDJN02_08753, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-60100Show/hide
Query:  MTTNLLVFRPIGIRPSASAGTGHRKSDPQRHYRPWWKPCPPNKITEGAQPNPNSDSNSAEKAAGSRFSPGGLTAEKARQLRIMTSKTDCFQDGMYHSGVA
        MTTNLLVFRPIGIRPSASAGTGHRKSDPQRHYRPWWKPCPPNKITEGAQPNPNSDSNSAEKAAGSRFSPGGLTAEKARQLRIMTSKTDCFQDGMYHSGVA
Subjt:  MTTNLLVFRPIGIRPSASAGTGHRKSDPQRHYRPWWKPCPPNKITEGAQPNPNSDSNSAEKAAGSRFSPGGLTAEKARQLRIMTSKTDCFQDGMYHSGVA

Query:  SRLASDFSNTKNDTGK
        SRLASDFSNTKNDTGK
Subjt:  SRLASDFSNTKNDTGK

XP_022998955.1 uncharacterized protein LOC111493481 [Cucurbita maxima]1.8e-5695.76Show/hide
Query:  MTTNLLVFRPIGIRPSASAGTGHRKSDPQRHYRPWWKPCPPNKITEGAQPNPNSDSNS--AEKAAGSRFSPGGLTAEKARQLRIMTSKTDCFQDGMYHSG
        MTTNLLVFRPIGIRPSASAGTGHRK DPQRHYRPWWKPCPPNKITEGAQP+PNSDSNS  AEKAAGSRFSPG LTAEKARQLRIMTSKTDCFQDGMYHSG
Subjt:  MTTNLLVFRPIGIRPSASAGTGHRKSDPQRHYRPWWKPCPPNKITEGAQPNPNSDSNS--AEKAAGSRFSPGGLTAEKARQLRIMTSKTDCFQDGMYHSG

Query:  VASRLASDFSNTKNDTGK
        VASRLASDFSNTKNDTGK
Subjt:  VASRLASDFSNTKNDTGK

XP_028107487.1 uncharacterized protein LOC114306445 [Camellia sinensis]1.6e-1547.66Show/hide
Query:  MTTNLLVFRPIGIRPSASAGTGHRKSDPQRHYRP---WWKP-----CPPNKI----TEGAQPNPNSDSNSA----EKAAGSRFSPGGLTAEKARQLRIMT
        M T+L  FRPIG+R  A    GHRK D  R       WW P       P+ I    +  A P+  S+S SA    +K+A SRFSPG  T EKARQLR+MT
Subjt:  MTTNLLVFRPIGIRPSASAGTGHRKSDPQRHYRP---WWKP-----CPPNKI----TEGAQPNPNSDSNSA----EKAAGSRFSPGGLTAEKARQLRIMT

Query:  SKTDCFQDGMYHSGVASRLASDFSNTKN
         +T  F D MYHS +ASRLASDF N+ +
Subjt:  SKTDCFQDGMYHSGVASRLASDFSNTKN

TrEMBL top hitse value%identityAlignment
A0A4S4DBT2 Uncharacterized protein5.0e-1546.88Show/hide
Query:  MTTNLLVFRPIGIRPSASAGTGHRKSDPQRHYRP---WWKP-----CPPNKI----TEGAQPNPNSDSNSA----EKAAGSRFSPGGLTAEKARQLRIMT
        M  +L  FRPIG+R  A    GHRK D  R       WW P       P+ I    +  A P+  S+S SA    +K+A SRFSPG  T EKARQLR+MT
Subjt:  MTTNLLVFRPIGIRPSASAGTGHRKSDPQRHYRP---WWKP-----CPPNKI----TEGAQPNPNSDSNSA----EKAAGSRFSPGGLTAEKARQLRIMT

Query:  SKTDCFQDGMYHSGVASRLASDFSNTKN
         +T  F D MYHS +ASRLASDF N+ +
Subjt:  SKTDCFQDGMYHSGVASRLASDFSNTKN

A0A4V3WM73 Uncharacterized protein7.7e-1647.66Show/hide
Query:  MTTNLLVFRPIGIRPSASAGTGHRKSDPQRHYRP---WWKP-----CPPNKI----TEGAQPNPNSDSNSA----EKAAGSRFSPGGLTAEKARQLRIMT
        M T+L  FRPIG+R  A    GHRK D  R       WW P       P+ I    +  A P+  S+S SA    +K+A SRFSPG  T EKARQLR+MT
Subjt:  MTTNLLVFRPIGIRPSASAGTGHRKSDPQRHYRP---WWKP-----CPPNKI----TEGAQPNPNSDSNSA----EKAAGSRFSPGGLTAEKARQLRIMT

Query:  SKTDCFQDGMYHSGVASRLASDFSNTKN
         +T  F D MYHS +ASRLASDF N+ +
Subjt:  SKTDCFQDGMYHSGVASRLASDFSNTKN

A0A5A7V2V1 Uncharacterized protein2.7e-2155.26Show/hide
Query:  MTTNLLVFRPIGIRPSASAG--TGHRKSDPQRHYRPWWKPCPPNKITEGAQPNPNSDSNSAEKAAGSRFSPGGLTAEKARQLRIMTSKTDCFQDGMYHSG
        MTTNLL+FRPI I+ SA++G  +GHRK  P R  RP W+P  P+ I++  +P    D +S E+   S+ S G  T EKA+QLRIMT+K + F DGMYHS 
Subjt:  MTTNLLVFRPIGIRPSASAG--TGHRKSDPQRHYRPWWKPCPPNKITEGAQPNPNSDSNSAEKAAGSRFSPGGLTAEKARQLRIMTSKTDCFQDGMYHSG

Query:  VASRLASDFSNTKN
        +ASRLASDFSNT N
Subjt:  VASRLASDFSNTKN

A0A6J1KDY2 uncharacterized protein LOC1114934818.9e-5795.76Show/hide
Query:  MTTNLLVFRPIGIRPSASAGTGHRKSDPQRHYRPWWKPCPPNKITEGAQPNPNSDSNS--AEKAAGSRFSPGGLTAEKARQLRIMTSKTDCFQDGMYHSG
        MTTNLLVFRPIGIRPSASAGTGHRK DPQRHYRPWWKPCPPNKITEGAQP+PNSDSNS  AEKAAGSRFSPG LTAEKARQLRIMTSKTDCFQDGMYHSG
Subjt:  MTTNLLVFRPIGIRPSASAGTGHRKSDPQRHYRPWWKPCPPNKITEGAQPNPNSDSNS--AEKAAGSRFSPGGLTAEKARQLRIMTSKTDCFQDGMYHSG

Query:  VASRLASDFSNTKNDTGK
        VASRLASDFSNTKNDTGK
Subjt:  VASRLASDFSNTKNDTGK

F6HH66 Uncharacterized protein2.2e-1546.02Show/hide
Query:  MTTNLLVFRPIGIRPSASAGTGHRKSDPQRHYRP--WWKPCPPNKITEGAQPNPNSDSNSAE----KAAGSRFSPGGLTAEKARQLRIMTSKTDCFQDGM
        M T+L+ FRPIGIR  A++   HR+S     + P   W P P     E   PNP + S S +    K + SR++PG  T EKA+QLR++T+ T  F D M
Subjt:  MTTNLLVFRPIGIRPSASAGTGHRKSDPQRHYRP--WWKPCPPNKITEGAQPNPNSDSNSAE----KAAGSRFSPGGLTAEKARQLRIMTSKTDCFQDGM

Query:  YHSGVASRLASDF
        YHS +ASRLASDF
Subjt:  YHSGVASRLASDF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52720.1 unknown protein1.3e-0736.54Show/hide
Query:  ASAGTGHRKSDPQR-HYRPWWKPC------PPNKITEGAQPNPNSDSNSAEKAAGSRFSPGGLTAEKARQLRIMTSKTDCFQDGMYHSGVASRLASDFSN
        AS+G+G    D  R     WW P       P     E +    N D       +G +F  G  T EKA+QLR  T++   F D MYHS +ASRLASD + 
Subjt:  ASAGTGHRKSDPQR-HYRPWWKPC------PPNKITEGAQPNPNSDSNSAEKAAGSRFSPGGLTAEKARQLRIMTSKTDCFQDGMYHSGVASRLASDFSN

Query:  TKND
           D
Subjt:  TKND

AT3G15630.1 unknown protein1.6e-0541.3Show/hide
Query:  KSDPQRHYRP-----WWKP-----CPPNKITEGAQPNPNSDSNSAEKAAGSRFSPGGLTAEKARQLRIMTSKTDCFQDGMYHSGVASRLASD
        +SDP R  +P     WW P       P+ + +    N  SD + AEK    R     LT EKA+QLR  T++   F D MYHS +ASRLASD
Subjt:  KSDPQRHYRP-----WWKP-----CPPNKITEGAQPNPNSDSNSAEKAAGSRFSPGGLTAEKARQLRIMTSKTDCFQDGMYHSGVASRLASD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCACCAATCTACTCGTCTTCCGCCCCATCGGAATCCGACCCTCTGCCAGCGCCGGCACCGGTCACCGGAAATCAGATCCCCAGCGCCATTACAGGCCCTGGTGGAA
ACCTTGCCCGCCGAACAAAATCACCGAGGGTGCGCAGCCAAATCCTAATTCGGATTCGAATTCGGCAGAGAAGGCAGCGGGGAGCCGATTCTCTCCCGGTGGCTTAACAG
CAGAGAAAGCGAGGCAACTCCGAATTATGACGTCGAAAACCGATTGTTTTCAGGACGGAATGTACCATTCGGGCGTCGCATCTCGGCTGGCTTCCGATTTCTCGAACACT
AAGAATGACACCGGAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGACCACCAATCTACTCGTCTTCCGCCCCATCGGAATCCGACCCTCTGCCAGCGCCGGCACCGGTCACCGGAAATCAGATCCCCAGCGCCATTACAGGCCCTGGTGGAA
ACCTTGCCCGCCGAACAAAATCACCGAGGGTGCGCAGCCAAATCCTAATTCGGATTCGAATTCGGCAGAGAAGGCAGCGGGGAGCCGATTCTCTCCCGGTGGCTTAACAG
CAGAGAAAGCGAGGCAACTCCGAATTATGACGTCGAAAACCGATTGTTTTCAGGACGGAATGTACCATTCGGGCGTCGCATCTCGGCTGGCTTCCGATTTCTCGAACACT
AAGAATGACACCGGAAAATAG
Protein sequenceShow/hide protein sequence
MTTNLLVFRPIGIRPSASAGTGHRKSDPQRHYRPWWKPCPPNKITEGAQPNPNSDSNSAEKAAGSRFSPGGLTAEKARQLRIMTSKTDCFQDGMYHSGVASRLASDFSNT
KNDTGK