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Carg10903 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10903
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein BUNDLE SHEATH DEFECTIVE 2, chloroplastic
Genome locationCarg_Chr05:11437748..11441167
RNA-Seq ExpressionCarg10903
SyntenyCarg10903
Gene Ontology termsGO:0061077 - chaperone-mediated protein folding (biological process)
GO:0009570 - chloroplast stroma (cellular component)
GO:0101031 - chaperone complex (cellular component)
GO:0044183 - protein folding chaperone (molecular function)
InterPro domainsIPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599402.1 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]8.7e-2598.21Show/hide
Query:  AVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTAD
        AVLCSQCKGTGVNSVDHFNGQFKAGS CWLCSGKKDILCGGCNGAGFMGGFMSTAD
Subjt:  AVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTAD
KAG7030389.1 hypothetical protein SDJN02_08736, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-47100Show/hide
Query:  MNPRDLDDQTRYEDGLANEPFFISAAQMKHVSSYSAVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTADS
        MNPRDLDDQTRYEDGLANEPFFISAAQMKHVSSYSAVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTADS
Subjt:  MNPRDLDDQTRYEDGLANEPFFISAAQMKHVSSYSAVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTADS
XP_022946217.1 uncharacterized protein LOC111450369 [Cucurbita moschata]3.0e-2598.25Show/hide
Query:  AVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTADS
        AVLCSQCKGTGVNSVDHFNGQFKAGS CWLCSGKKDILCGGCNGAGFMGGFMSTADS
Subjt:  AVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTADS
XP_022999180.1 uncharacterized protein LOC111493642 [Cucurbita maxima]7.8e-26100Show/hide
Query:  AVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTADS
        AVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTADS
Subjt:  AVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTADS
XP_023522471.1 uncharacterized protein LOC111786453 [Cucurbita pepo subsp. pepo]7.8e-26100Show/hide
Query:  AVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTADS
        AVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTADS
Subjt:  AVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTADS
TrEMBL top hitse value%identityAlignment
A0A0A0LFZ2 Uncharacterized protein2.3e-2389.47Show/hide
Query:  AVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTADS
        AV CSQCKGTGVNSVDHFNGQFKAG +CWLC GK+DILCGGCNGAGF+GGFMSTADS
Subjt:  AVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTADS
A0A1S3C5F0 uncharacterized protein LOC1034972446.1e-2489.47Show/hide
Query:  AVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTADS
        AVLCSQCKGTGVNSVDHFNGQFKAG +CWLC GK+D+LCGGCNGAGF+GGFMSTADS
Subjt:  AVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTADS
A0A5A7V544 Chaperone protein DnaJ-like6.1e-2489.47Show/hide
Query:  AVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTADS
        AVLCSQCKGTGVNSVDHFNGQFKAG +CWLC GK+D+LCGGCNGAGF+GGFMSTADS
Subjt:  AVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTADS
A0A6J1G351 uncharacterized protein LOC1114503691.4e-2598.25Show/hide
Query:  AVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTADS
        AVLCSQCKGTGVNSVDHFNGQFKAGS CWLCSGKKDILCGGCNGAGFMGGFMSTADS
Subjt:  AVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTADS
A0A6J1KEM1 uncharacterized protein LOC1114936423.8e-26100Show/hide
Query:  AVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTADS
        AVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTADS
Subjt:  AVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTADS
SwissProt top hitse value%identityAlignment
Q9SN73 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic1.6e-2176.36Show/hide
Query:  VLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTAD
        V CSQCKG GVN +DHFNGQFKAG++CWLC GKK++LCG CNGAGF+GGF+ST D
Subjt:  VLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTAD
Q9XF14 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic2.3e-2069.64Show/hide
Query:  AVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTAD
        A++C++C+G GVNSVD+F G+FKAGS+CWLC GK++ILCG CNGAGF+GGF+ST D
Subjt:  AVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTAD
Arabidopsis top hitse value%identityAlignment
AT3G47650.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein1.1e-2276.36Show/hide
Query:  VLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTAD
        V CSQCKG GVN +DHFNGQFKAG++CWLC GKK++LCG CNGAGF+GGF+ST D
Subjt:  VLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTAD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCCGAGGGATCTCGACGATCAAACACGGTATGAGGACGGTCTTGCAAACGAGCCATTTTTCATCTCAGCTGCTCAGATGAAGCATGTAAGCTCTTATAGTGCTGT
CCTATGTTCTCAGTGTAAAGGAACAGGAGTGAATTCAGTGGATCATTTCAATGGACAGTTCAAAGCTGGTAGCATATGCTGGCTCTGCAGTGGCAAAAAGGACATCCTGT
GTGGGGGCTGTAATGGAGCTGGTTTTATGGGTGGGTTTATGAGTACAGCTGACAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACCCGAGGGATCTCGACGATCAAACACGGTATGAGGACGGTCTTGCAAACGAGCCATTTTTCATCTCAGCTGCTCAGATGAAGCATGTAAGCTCTTATAGTGCTGT
CCTATGTTCTCAGTGTAAAGGAACAGGAGTGAATTCAGTGGATCATTTCAATGGACAGTTCAAAGCTGGTAGCATATGCTGGCTCTGCAGTGGCAAAAAGGACATCCTGT
GTGGGGGCTGTAATGGAGCTGGTTTTATGGGTGGGTTTATGAGTACAGCTGACAGTTAG
Protein sequenceShow/hide protein sequence
MNPRDLDDQTRYEDGLANEPFFISAAQMKHVSSYSAVLCSQCKGTGVNSVDHFNGQFKAGSICWLCSGKKDILCGGCNGAGFMGGFMSTADS