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Carg10908 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10908
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr05:11421767..11422170
RNA-Seq ExpressionCarg10908
SyntenyCarg10908
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599399.1 hypothetical protein SDJN03_09177, partial [Cucurbita argyrosperma subsp. sororia]6.5e-4898.17Show/hide
Query:  MAMADLSGAVAVVLSFRHRKSAASVSSVV-KKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDR
        MAMADLSGAVAVVLSFRHRKSAASVSSVV KKKKGRKRV FADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDR
Subjt:  MAMADLSGAVAVVLSFRHRKSAASVSSVV-KKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDR

Query:  LVHRMAYSL
        LVHRMAYSL
Subjt:  LVHRMAYSL

KAG7030384.1 hypothetical protein SDJN02_08731, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-50100Show/hide
Query:  MAMADLSGAVAVVLSFRHRKSAASVSSVVKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDRL
        MAMADLSGAVAVVLSFRHRKSAASVSSVVKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDRL
Subjt:  MAMADLSGAVAVVLSFRHRKSAASVSSVVKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDRL

Query:  VHRMAYSL
        VHRMAYSL
Subjt:  VHRMAYSL

XP_022946910.1 uncharacterized protein LOC111450851 isoform X1 [Cucurbita moschata]2.7e-4690.6Show/hide
Query:  MAMADLSGAVAVVLSFRHRKSAASVSS---------VVKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVAL
        MAMA LSGAVAVVLSFRHRKSAASVSS         V KKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVAL
Subjt:  MAMADLSGAVAVVLSFRHRKSAASVSS---------VVKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVAL

Query:  YNGILRDRLVHRMAYSL
        YNGILRDRLVHRMAYSL
Subjt:  YNGILRDRLVHRMAYSL

XP_022946911.1 uncharacterized protein LOC111450851 isoform X2 [Cucurbita moschata]6.5e-4898.17Show/hide
Query:  MAMADLSGAVAVVLSFRHRKSAASVSSVV-KKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDR
        MAMA LSGAVAVVLSFRHRKSAASVSSVV KKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDR
Subjt:  MAMADLSGAVAVVLSFRHRKSAASVSSVV-KKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDR

Query:  LVHRMAYSL
        LVHRMAYSL
Subjt:  LVHRMAYSL

XP_038890799.1 uncharacterized protein LOC120080255 [Benincasa hispida]1.6e-3071.93Show/hide
Query:  MAMADLSGAVAVVLSFRHRKSAASVSSVV------KKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNG
        MA A LSG V V+LSF   KS  S+SSVV      KKKKGRKRVHFADD A+  TEELQ K GLILG SPP GR P   LTS GGGG GMPANRVALYNG
Subjt:  MAMADLSGAVAVVLSFRHRKSAASVSSVV------KKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNG

Query:  ILRDRLVHRMAYSL
        ILRDRLVHR+AYSL
Subjt:  ILRDRLVHRMAYSL

TrEMBL top hitse value%identityAlignment
A0A0A0LIY8 Uncharacterized protein8.4e-2562.61Show/hide
Query:  MAMADLSGAVAVVLSFRHRKSAASVSSVV------KKKKGRKRVHFADDSAV-CSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYN
        MAMA  +G V VVLSF   KS  S+SSV+      KKKKGRK+VHF+DD A+  ST++L+RK  ++LG SPP GRAP   LT+ GGGG G+PANR ALYN
Subjt:  MAMADLSGAVAVVLSFRHRKSAASVSSVV------KKKKGRKRVHFADDSAV-CSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYN

Query:  GILRDRLVHRMAYSL
        GILR+RLVHR+AYSL
Subjt:  GILRDRLVHRMAYSL

A0A1S3C5Q6 uncharacterized protein LOC1034972023.8e-2566.38Show/hide
Query:  MAMADLS-GAVAVVLSFRHRKSAASVSSVV------KKKKGRKRVHFADDSAV-CSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALY
        MA A LS G V VVLS    KS  S+SSVV      KKKKGRKRVHF+DD A+  STEEL+RK  +ILG SP  GRA    LT +GGGG GMPANR ALY
Subjt:  MAMADLS-GAVAVVLSFRHRKSAASVSSVV------KKKKGRKRVHFADDSAV-CSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALY

Query:  NGILRDRLVHRMAYSL
        NGILRDRLVHR+AYSL
Subjt:  NGILRDRLVHRMAYSL

A0A5A7V7G5 Uncharacterized protein3.2e-1655.96Show/hide
Query:  MAMADLS-GAVAVVLSFRHRKSAASVSSVVKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDR
        MA A LS G V VVLS    KS  S+SS +                  STEEL+RK  +ILG SP  GRA    LT +GGGG GMPANR ALYNGILRDR
Subjt:  MAMADLS-GAVAVVLSFRHRKSAASVSSVVKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDR

Query:  LVHRMAYSL
        LVHR+AYSL
Subjt:  LVHRMAYSL

A0A6J1G4X1 uncharacterized protein LOC111450851 isoform X23.2e-4898.17Show/hide
Query:  MAMADLSGAVAVVLSFRHRKSAASVSSVV-KKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDR
        MAMA LSGAVAVVLSFRHRKSAASVSSVV KKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDR
Subjt:  MAMADLSGAVAVVLSFRHRKSAASVSSVV-KKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDR

Query:  LVHRMAYSL
        LVHRMAYSL
Subjt:  LVHRMAYSL

A0A6J1G5C3 uncharacterized protein LOC111450851 isoform X11.3e-4690.6Show/hide
Query:  MAMADLSGAVAVVLSFRHRKSAASVSS---------VVKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVAL
        MAMA LSGAVAVVLSFRHRKSAASVSS         V KKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVAL
Subjt:  MAMADLSGAVAVVLSFRHRKSAASVSS---------VVKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVAL

Query:  YNGILRDRLVHRMAYSL
        YNGILRDRLVHRMAYSL
Subjt:  YNGILRDRLVHRMAYSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15760.1 unknown protein3.6e-0442.53Show/hide
Query:  VSSVVKKKKGR--KRVHFADD--SAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDRLVHRMAYS
        +SS   KK+G+  K+V FAD+      + EE +R+         PV +   P  T      S MPANR+ALYNGILRDR  HR+ YS
Subjt:  VSSVVKKKKGR--KRVHFADD--SAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDRLVHRMAYS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGGCAGATCTCTCAGGGGCTGTCGCCGTCGTGCTTTCCTTCCGCCACCGTAAATCCGCCGCCTCAGTTTCTTCCGTGGTGAAGAAGAAGAAGGGAAGAAAAAG
AGTTCACTTTGCTGATGATTCAGCTGTTTGCAGTACTGAAGAGTTGCAGAGAAAAAACGGCTTAATTTTGGGGCCTTCGCCGCCGGTGGGTAGAGCTCCGCCACCGTCTT
TGACGAGCCACGGTGGAGGAGGCAGCGGAATGCCGGCGAATAGGGTGGCGCTGTACAACGGAATCTTAAGGGATCGTTTGGTTCACAGGATGGCATATTCTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTATGGCAGATCTCTCAGGGGCTGTCGCCGTCGTGCTTTCCTTCCGCCACCGTAAATCCGCCGCCTCAGTTTCTTCCGTGGTGAAGAAGAAGAAGGGAAGAAAAAG
AGTTCACTTTGCTGATGATTCAGCTGTTTGCAGTACTGAAGAGTTGCAGAGAAAAAACGGCTTAATTTTGGGGCCTTCGCCGCCGGTGGGTAGAGCTCCGCCACCGTCTT
TGACGAGCCACGGTGGAGGAGGCAGCGGAATGCCGGCGAATAGGGTGGCGCTGTACAACGGAATCTTAAGGGATCGTTTGGTTCACAGGATGGCATATTCTCTTTAA
Protein sequenceShow/hide protein sequence
MAMADLSGAVAVVLSFRHRKSAASVSSVVKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDRLVHRMAYSL