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Carg10948 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10948
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscriptional regulator SUPERMAN-like
Genome locationCarg_Chr08:6475068..6475517
RNA-Seq ExpressionCarg10948
SyntenyCarg10948
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593853.1 Transcriptional regulator SUPERMAN, partial [Cucurbita argyrosperma subsp. sororia]2.9e-78100Show/hide
Query:  MESKSLKMNSPQEQLRMTNKPNNTRGDHQEEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDSPHFHGSSSQPIKF
        MESKSLKMNSPQEQLRMTNKPNNTRGDHQEEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDSPHFHGSSSQPIKF
Subjt:  MESKSLKMNSPQEQLRMTNKPNNTRGDHQEEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDSPHFHGSSSQPIKF

Query:  LKLYDFSSLSGEEEADGECKIWKNVKKFVKEIDFLGSSNEIDLELRLGF
        LKLYDFSSLSGEEEADGECKIWKNVKKFVKEIDFLGSSNEIDLELRLGF
Subjt:  LKLYDFSSLSGEEEADGECKIWKNVKKFVKEIDFLGSSNEIDLELRLGF

XP_022930268.1 zinc finger protein 10-like [Cucurbita moschata]1.4e-7799.33Show/hide
Query:  MESKSLKMNSPQEQLRMTNKPNNTRGDHQEEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDSPHFHGSSSQPIKF
        MESKSLKMNSPQEQLRM NKPNNTRGDHQEEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDSPHFHGSSSQPIKF
Subjt:  MESKSLKMNSPQEQLRMTNKPNNTRGDHQEEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDSPHFHGSSSQPIKF

Query:  LKLYDFSSLSGEEEADGECKIWKNVKKFVKEIDFLGSSNEIDLELRLGF
        LKLYDFSSLSGEEEADGECKIWKNVKKFVKEIDFLGSSNEIDLELRLGF
Subjt:  LKLYDFSSLSGEEEADGECKIWKNVKKFVKEIDFLGSSNEIDLELRLGF

XP_023000620.1 transcriptional regulator SUPERMAN-like [Cucurbita maxima]5.1e-7595.97Show/hide
Query:  MESKSLKMNSPQEQLRMTNKPNNTRGDHQEEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDSPHFHGSSSQPIKF
        ME+KSLKMNSPQE+LR+TNKP NTRGDHQEEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPL SPHFHGSSSQPIKF
Subjt:  MESKSLKMNSPQEQLRMTNKPNNTRGDHQEEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDSPHFHGSSSQPIKF

Query:  LKLYDFSSLSGEEEADGECKIWKNVKKFVKEIDFLGSSNEIDLELRLGF
        LKLYDFSSLSGEEE DGECKIWKNVKKFVKEIDFLGSSNEIDLELRLGF
Subjt:  LKLYDFSSLSGEEEADGECKIWKNVKKFVKEIDFLGSSNEIDLELRLGF

XP_023514445.1 zinc finger protein 4-like [Cucurbita pepo subsp. pepo]1.3e-7395.97Show/hide
Query:  MESKSLKMNSPQEQLRMTNKPNNTRGDHQEEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDSPHFHGSSSQPIKF
        MESKSLKMNSPQEQLR+TNKPNNTRGDHQ  EEEEEEDIVGFAWGSSRAYSCGFCKR+FRSAQALGGHMNVHRRDRAKLRRSPPL SPHFHGSSSQPIKF
Subjt:  MESKSLKMNSPQEQLRMTNKPNNTRGDHQEEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDSPHFHGSSSQPIKF

Query:  LKLYDFSSLSGEEEADGECKIWKNVKKFVKEIDFLGSSNEIDLELRLGF
        LKLYDFSSL GEEEADGECKIWKNVKKFVKEIDFLGSSNEIDLELRLGF
Subjt:  LKLYDFSSLSGEEEADGECKIWKNVKKFVKEIDFLGSSNEIDLELRLGF

XP_038875029.1 transcriptional regulator TAC1-like [Benincasa hispida]7.9e-4464.81Show/hide
Query:  MNSPQEQLRM-------------TNKPNNTRGDHQEEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDSP-----H
        M+SPQE+LR+             ++K N+TR   + +EEEE+E +VGF W SSRAY+CGFCKRKF+SAQALGGHMNVHRRDRAKLRR+P LDS       
Subjt:  MNSPQEQLRM-------------TNKPNNTRGDHQEEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDSP-----H

Query:  FHGSSSQPIKFLKLYDFSSLSGEE-EADGECKIWKNVKKFVK-EIDFLGSSNEIDLELRLGF
        FHGSSSQPIKFLKLYDFSS  GEE E+DG CKIWK V KFVK E   L +SN+IDLEL+LGF
Subjt:  FHGSSSQPIKFLKLYDFSSLSGEE-EADGECKIWKNVKKFVK-EIDFLGSSNEIDLELRLGF

TrEMBL top hitse value%identityAlignment
A0A0A0LNQ1 C2H2-type domain-containing protein1.5e-4066.23Show/hide
Query:  PQEQLRMTNKPNNTRGDHQEEEEEEEEDIVGFAWGSSRA-YSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDSP-------HFHGSSSQPIKFLK
        PQ + + + K NN R  +Q EEEEE+E IV F W SSRA Y+CGFCKR+F+SAQALGGHMNVHRRDRAKLRRS PLDS         FHGSSSQPIKFLK
Subjt:  PQEQLRMTNKPNNTRGDHQEEEEEEEEDIVGFAWGSSRA-YSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDSP-------HFHGSSSQPIKFLK

Query:  LYDFSSLSGE---EEADGECKIWKNVKKFV-KEIDFLGSSNEIDLELRLGF
        LYDFSS  GE   +++DG C+IWK V KFV KE   L +SN+IDLELRLGF
Subjt:  LYDFSSLSGE---EEADGECKIWKNVKKFV-KEIDFLGSSNEIDLELRLGF

A0A1S3CPU8 transcriptional regulator SUPERMAN8.0e-4266.23Show/hide
Query:  PQEQLRMTNKPNNTRGDHQEEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDS----PHFH---GSSSQPIKFLKL
        PQ + + ++K +N R   QEEEE+E+E IV F W SSRAY+CGFCKR+F+SAQALGGHMNVHRRDRAKLRRS PLDS     H H   GSSSQPIKFLKL
Subjt:  PQEQLRMTNKPNNTRGDHQEEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDS----PHFH---GSSSQPIKFLKL

Query:  YDFSSLSGE---EEADGECKIWKNVKKFV--KEIDFLGSSNEIDLELRLGF
        YDFSS  GE   +++DG CKIWK V KFV  KE   L +SN+IDLELRLGF
Subjt:  YDFSSLSGE---EEADGECKIWKNVKKFV--KEIDFLGSSNEIDLELRLGF

A0A5D3CAK0 Transcriptional regulator SUPERMAN8.0e-4266.23Show/hide
Query:  PQEQLRMTNKPNNTRGDHQEEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDS----PHFH---GSSSQPIKFLKL
        PQ + + ++K +N R   QEEEE+E+E IV F W SSRAY+CGFCKR+F+SAQALGGHMNVHRRDRAKLRRS PLDS     H H   GSSSQPIKFLKL
Subjt:  PQEQLRMTNKPNNTRGDHQEEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDS----PHFH---GSSSQPIKFLKL

Query:  YDFSSLSGE---EEADGECKIWKNVKKFV--KEIDFLGSSNEIDLELRLGF
        YDFSS  GE   +++DG CKIWK V KFV  KE   L +SN+IDLELRLGF
Subjt:  YDFSSLSGE---EEADGECKIWKNVKKFV--KEIDFLGSSNEIDLELRLGF

A0A6J1EUL3 zinc finger protein 10-like6.9e-7899.33Show/hide
Query:  MESKSLKMNSPQEQLRMTNKPNNTRGDHQEEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDSPHFHGSSSQPIKF
        MESKSLKMNSPQEQLRM NKPNNTRGDHQEEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDSPHFHGSSSQPIKF
Subjt:  MESKSLKMNSPQEQLRMTNKPNNTRGDHQEEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDSPHFHGSSSQPIKF

Query:  LKLYDFSSLSGEEEADGECKIWKNVKKFVKEIDFLGSSNEIDLELRLGF
        LKLYDFSSLSGEEEADGECKIWKNVKKFVKEIDFLGSSNEIDLELRLGF
Subjt:  LKLYDFSSLSGEEEADGECKIWKNVKKFVKEIDFLGSSNEIDLELRLGF

A0A6J1KIV9 transcriptional regulator SUPERMAN-like2.5e-7595.97Show/hide
Query:  MESKSLKMNSPQEQLRMTNKPNNTRGDHQEEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDSPHFHGSSSQPIKF
        ME+KSLKMNSPQE+LR+TNKP NTRGDHQEEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPL SPHFHGSSSQPIKF
Subjt:  MESKSLKMNSPQEQLRMTNKPNNTRGDHQEEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDSPHFHGSSSQPIKF

Query:  LKLYDFSSLSGEEEADGECKIWKNVKKFVKEIDFLGSSNEIDLELRLGF
        LKLYDFSSLSGEEE DGECKIWKNVKKFVKEIDFLGSSNEIDLELRLGF
Subjt:  LKLYDFSSLSGEEEADGECKIWKNVKKFVKEIDFLGSSNEIDLELRLGF

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 101.2e-1054.41Show/hide
Query:  EEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDSPHFHGSSSQP
        EE    E+D  G  W   R+Y+C FC+R+F+SAQALGGHMNVHRRDRA+L+++   D   F  SSS P
Subjt:  EEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDSPHFHGSSSQP

Q38895 Transcriptional regulator SUPERMAN2.9e-1250Show/hide
Query:  EEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLR----------RSPPLDSPHFHGSS
        +++ + ++GF+W   R+Y+C FCKR+FRSAQALGGHMNVHRRDRA+LR           SPP  +P++  S+
Subjt:  EEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLR----------RSPPLDSPHFHGSS

Q9LHS9 Probable transcriptional regulator RABBIT EARS6.6e-0976.47Show/hide
Query:  RAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRR
        R+YSC FC R+F+SAQALGGHMNVHRRDRA+L++
Subjt:  RAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRR

Q9SLB8 Zinc finger protein 113.2e-1167.35Show/hide
Query:  YSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPP-LDSPHFHGSSSQP
        Y+C FC+R+FRSAQALGGHMNVHRRDRAKLR+ P  L  PH H   + P
Subjt:  YSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPP-LDSPHFHGSSSQP

Q9SR34 Transcriptional regulator TAC14.3e-0874.29Show/hide
Query:  SRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRR
        SR+Y C FC R F +AQALGGHMN+HRRDRAKLR+
Subjt:  SRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRR

Arabidopsis top hitse value%identityAlignment
AT2G37740.1 zinc-finger protein 108.5e-1254.41Show/hide
Query:  EEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDSPHFHGSSSQP
        EE    E+D  G  W   R+Y+C FC+R+F+SAQALGGHMNVHRRDRA+L+++   D   F  SSS P
Subjt:  EEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDSPHFHGSSSQP

AT2G42410.1 zinc finger protein 112.2e-1267.35Show/hide
Query:  YSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPP-LDSPHFHGSSSQP
        Y+C FC+R+FRSAQALGGHMNVHRRDRAKLR+ P  L  PH H   + P
Subjt:  YSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPP-LDSPHFHGSSSQP

AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein2.0e-1350Show/hide
Query:  EEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLR----------RSPPLDSPHFHGSS
        +++ + ++GF+W   R+Y+C FCKR+FRSAQALGGHMNVHRRDRA+LR           SPP  +P++  S+
Subjt:  EEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLR----------RSPPLDSPHFHGSS

AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein9.4e-1161.22Show/hide
Query:  EEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLR
        E++ + +I G  W   R+Y+C FC+R+FRSAQALGGHMNVHRRDRA  R
Subjt:  EEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLR

AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein4.7e-1076.47Show/hide
Query:  RAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRR
        R+YSC FC R+F+SAQALGGHMNVHRRDRA+L++
Subjt:  RAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGCAAAAGTTTGAAGATGAACAGCCCACAAGAACAGCTTAGAATGACAAACAAACCCAACAACACAAGAGGAGATCATCAAGAAGAAGAAGAAGAAGAAGAAGA
AGACATTGTTGGATTTGCATGGGGTTCATCAAGAGCTTATTCATGTGGGTTTTGCAAAAGGAAATTTCGATCTGCGCAAGCTCTTGGTGGGCACATGAATGTTCATCGAA
GAGACCGAGCCAAGCTCCGAAGATCTCCTCCATTGGATTCACCTCATTTTCATGGATCCTCGTCTCAACCCATTAAGTTTCTTAAACTCTATGATTTCTCAAGCCTTAGT
GGTGAAGAAGAAGCTGATGGAGAGTGTAAGATTTGGAAGAATGTTAAGAAGTTTGTGAAGGAGATTGATTTTCTTGGTAGTTCCAATGAGATTGATTTGGAACTTAGATT
AGGGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGCAAAAGTTTGAAGATGAACAGCCCACAAGAACAGCTTAGAATGACAAACAAACCCAACAACACAAGAGGAGATCATCAAGAAGAAGAAGAAGAAGAAGAAGA
AGACATTGTTGGATTTGCATGGGGTTCATCAAGAGCTTATTCATGTGGGTTTTGCAAAAGGAAATTTCGATCTGCGCAAGCTCTTGGTGGGCACATGAATGTTCATCGAA
GAGACCGAGCCAAGCTCCGAAGATCTCCTCCATTGGATTCACCTCATTTTCATGGATCCTCGTCTCAACCCATTAAGTTTCTTAAACTCTATGATTTCTCAAGCCTTAGT
GGTGAAGAAGAAGCTGATGGAGAGTGTAAGATTTGGAAGAATGTTAAGAAGTTTGTGAAGGAGATTGATTTTCTTGGTAGTTCCAATGAGATTGATTTGGAACTTAGATT
AGGGTTTTAG
Protein sequenceShow/hide protein sequence
MESKSLKMNSPQEQLRMTNKPNNTRGDHQEEEEEEEEDIVGFAWGSSRAYSCGFCKRKFRSAQALGGHMNVHRRDRAKLRRSPPLDSPHFHGSSSQPIKFLKLYDFSSLS
GEEEADGECKIWKNVKKFVKEIDFLGSSNEIDLELRLGF