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Carg10949 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10949
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionC2H2-type domain-containing protein
Genome locationCarg_Chr08:6472114..6472581
RNA-Seq ExpressionCarg10949
SyntenyCarg10949
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593852.1 Transcriptional regulator TAC1, partial [Cucurbita argyrosperma subsp. sororia]5.3e-83100Show/hide
Query:  MDSEKLGSSSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEPSTFVNTPNFEPLLVGSKVSY
        MDSEKLGSSSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEPSTFVNTPNFEPLLVGSKVSY
Subjt:  MDSEKLGSSSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEPSTFVNTPNFEPLLVGSKVSY

Query:  APSGSNPDGYFQELGDLNMNHWGNDLSLRIEPSKGRSGVWSGEGLDLELRLGHYP
        APSGSNPDGYFQELGDLNMNHWGNDLSLRIEPSKGRSGVWSGEGLDLELRLGHYP
Subjt:  APSGSNPDGYFQELGDLNMNHWGNDLSLRIEPSKGRSGVWSGEGLDLELRLGHYP

XP_022930490.1 probable transcriptional regulator RABBIT EARS [Cucurbita moschata]8.4e-8197.42Show/hide
Query:  MDSEKLGSSSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEPSTFVNTPNFEPLLVGSKVSY
        MDSEKLGSSSESSS EQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQ+ASFCVPSKQIEPSTFVNTPNFEPLLVGSKVSY
Subjt:  MDSEKLGSSSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEPSTFVNTPNFEPLLVGSKVSY

Query:  APSGSNPDGYFQELGDLNMNHWGNDLSLRIEPSKGRSGVWSGEGLDLELRLGHYP
        APSGSNPDGYFQELGDLNMN+WGNDLSLRIEPSKGR GVWSGEGLDLELRLGHYP
Subjt:  APSGSNPDGYFQELGDLNMNHWGNDLSLRIEPSKGRSGVWSGEGLDLELRLGHYP

XP_023000554.1 zinc finger protein GIS-like [Cucurbita maxima]1.0e-7391.61Show/hide
Query:  MDSEKLGSSSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEPSTFVNTPNFEPLLVGSKVSY
        MDSEKL SSSESSSEEQSDRVNEDDSDSF VKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQ+ASFCVPSKQ EPSTFV+TPNFEPLLVGSKVSY
Subjt:  MDSEKLGSSSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEPSTFVNTPNFEPLLVGSKVSY

Query:  APSGSNPDGYFQELGDLNMNHWGNDLSLRIEPSKGRSGVWSGEGLDLELRLGHYP
          SGSNPDGYFQ  G+LNMN WG DLSLRIEPSKGR GVWSGEGLDLELRLGHYP
Subjt:  APSGSNPDGYFQELGDLNMNHWGNDLSLRIEPSKGRSGVWSGEGLDLELRLGHYP

XP_023514446.1 probable transcriptional regulator RABBIT EARS [Cucurbita pepo subsp. pepo]1.6e-7997.42Show/hide
Query:  MDSEKLGSSSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEPSTFVNTPNFEPLLVGSKVSY
        MDSEKLGSSSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEPSTFVNT NFEPLLVGSKVSY
Subjt:  MDSEKLGSSSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEPSTFVNTPNFEPLLVGSKVSY

Query:  APSGSNPDGYFQELGDLNMNHWGNDLSLRIEPSKGRSGVWSGEGLDLELRLGHYP
        APSGSNPDGYFQELGDLNMN WG DLSLRIEPSKGR GVWSGEGLDLELRLGHYP
Subjt:  APSGSNPDGYFQELGDLNMNHWGNDLSLRIEPSKGRSGVWSGEGLDLELRLGHYP

XP_038875027.1 zinc finger protein 6-like [Benincasa hispida]6.5e-4164.46Show/hide
Query:  MDS-EKLGSS-SESSSE-EQSDRVNEDD-SDSFG---VKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQV--ASFCVPSKQI-EPST-FVNTPNF
        MDS +KLGSS SESSSE EQS+ V EDD SDSF    +KRSY CIFCKRGFTNAQALGGHMNIHRKDR NK  ++  +S  + S QI  PST F + P F
Subjt:  MDS-EKLGSS-SESSSE-EQSDRVNEDD-SDSFG---VKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQV--ASFCVPSKQI-EPST-FVNTPNF

Query:  EPLLVGSKVSYAPSGSNPDGYFQELGDLNMNHWGNDLSLRIEPSKGRSGVWSGEGLDLELRLGHYP
         PLL  S+V+Y  S SN  GYFQ+LGD NMN WG+DLSL+I P+ GR  +W+G+G+DLELRLGH+P
Subjt:  EPLLVGSKVSYAPSGSNPDGYFQELGDLNMNHWGNDLSLRIEPSKGRSGVWSGEGLDLELRLGHYP

TrEMBL top hitse value%identityAlignment
A0A0A0LI91 C2H2-type domain-containing protein2.3e-2851.27Show/hide
Query:  ESSSEEQSDRVNEDDSDSFG---VKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVA-SFCVPSKQ---------IEPSTFVNTPNFEPLLVGSK
        E++++E  D  + + SD+F    +KRSY CIFCKRGFTNAQALGGHMNIHRKDR NK  + + SF   S           I PSTF N P F PLL  S+
Subjt:  ESSSEEQSDRVNEDDSDSFG---VKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVA-SFCVPSKQ---------IEPSTFVNTPNFEPLLVGSK

Query:  VSYAPSGSNPDGYFQELGDLNMNHWGNDLSLRIEPSKGRSGVW-SGEGLDLELRLGHY
        V+Y  S SN  G        NMN WG+DLSL+I  + GR  +W +G+G+DLELRLGH+
Subjt:  VSYAPSGSNPDGYFQELGDLNMNHWGNDLSLRIEPSKGRSGVW-SGEGLDLELRLGHY

A0A6A1W1M4 Transcriptional regulator TAC12.4e-2043.48Show/hide
Query:  MDSEKLGSSSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIE---PSTFVNTPNFEPLLV---
        M+S K    SE+SSEE      E+ +D  G KRSY C FCKRGFTNAQALGGHMNIHRKDRA KAKQ  S  +P+K  E   PS +++  + EP      
Subjt:  MDSEKLGSSSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIE---PSTFVNTPNFEPLLV---

Query:  -----GSKVSYAPSGSNP----------DGYFQELGDLNMNH---WGNDLSLRIEPSKGRS-----GVWSGEGLDLELRLGHYP
                + + PS S+P          D +        MN    WG +LSLRI P          GV   E +DLELRLGH P
Subjt:  -----GSKVSYAPSGSNP----------DGYFQELGDLNMNH---WGNDLSLRIEPSKGRS-----GVWSGEGLDLELRLGHYP

A0A6J1CE07 transcriptional regulator TAC1-like4.1e-4162.57Show/hide
Query:  MDSEK-LGSSSESSSEEQSDR--VNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQV--------ASFCVPSKQIEPSTFVNTPNF
        MDSEK LGSSS+SSSEEQ     +  D       KRSYGCIFCKRGFTNAQALGGHMNIHRKDRANK KQ+        +S CVPSKQIE S F+NT  F
Subjt:  MDSEK-LGSSSESSSEEQSDR--VNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQV--------ASFCVPSKQIEPSTFVNTPNF

Query:  EPLLVGSKVSYAPSGSNPDGYFQELGDLNMNH--WGNDLSLRIEPSKG---RSGVW--SGEGLDLELRLGH
               +V +  SGSNP GYFQELGDLN     WG+DLSL+I PSKG   R  +W  +GEGLDLELRLGH
Subjt:  EPLLVGSKVSYAPSGSNPDGYFQELGDLNMNH--WGNDLSLRIEPSKG---RSGVW--SGEGLDLELRLGH

A0A6J1EX07 probable transcriptional regulator RABBIT EARS4.1e-8197.42Show/hide
Query:  MDSEKLGSSSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEPSTFVNTPNFEPLLVGSKVSY
        MDSEKLGSSSESSS EQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQ+ASFCVPSKQIEPSTFVNTPNFEPLLVGSKVSY
Subjt:  MDSEKLGSSSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEPSTFVNTPNFEPLLVGSKVSY

Query:  APSGSNPDGYFQELGDLNMNHWGNDLSLRIEPSKGRSGVWSGEGLDLELRLGHYP
        APSGSNPDGYFQELGDLNMN+WGNDLSLRIEPSKGR GVWSGEGLDLELRLGHYP
Subjt:  APSGSNPDGYFQELGDLNMNHWGNDLSLRIEPSKGRSGVWSGEGLDLELRLGHYP

A0A6J1KKB3 zinc finger protein GIS-like4.8e-7491.61Show/hide
Query:  MDSEKLGSSSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEPSTFVNTPNFEPLLVGSKVSY
        MDSEKL SSSESSSEEQSDRVNEDDSDSF VKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQ+ASFCVPSKQ EPSTFV+TPNFEPLLVGSKVSY
Subjt:  MDSEKLGSSSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEPSTFVNTPNFEPLLVGSKVSY

Query:  APSGSNPDGYFQELGDLNMNHWGNDLSLRIEPSKGRSGVWSGEGLDLELRLGHYP
          SGSNPDGYFQ  G+LNMN WG DLSLRIEPSKGR GVWSGEGLDLELRLGHYP
Subjt:  APSGSNPDGYFQELGDLNMNHWGNDLSLRIEPSKGRSGVWSGEGLDLELRLGHYP

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 102.9e-0741.67Show/hide
Query:  SSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEP
        S++ SS E+     +D + S    RSY C FC+R F +AQALGGHMN+HR+DRA   +    +  P     P
Subjt:  SSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEP

Q38895 Transcriptional regulator SUPERMAN4.4e-0852.63Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEPSTFVNTPNF
        RSY C FCKR F +AQALGGHMN+HR+DRA    Q +    PS    PS     PN+
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEPSTFVNTPNF

Q9LHS9 Probable transcriptional regulator RABBIT EARS3.1e-0938.83Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEPSTFVNTPNFEPLLVGSKVSYAPSGSNPDGYFQELGDLNMNHWGNDLSLRIEP
        RSY C FC R F +AQALGGHMN+HR+DRA   +Q  S   PS   + +        + L VGSKV        P+G  +E+ D+  N+       R E 
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEPSTFVNTPNFEPLLVGSKVSYAPSGSNPDGYFQELGDLNMNHWGNDLSLRIEP

Query:  SKG
          G
Subjt:  SKG

Q9SLB8 Zinc finger protein 117.6e-0833.33Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCV------------PSKQIEPSTFVNTPNFEPLLVGSKVSYAPSGSNPDGYFQELGDLNMN
        ++Y C FC+R F +AQALGGHMN+HR+DRA K +Q+ S+              P+     S+   T + EP L   +    P    P   F +L D   +
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCV------------PSKQIEPSTFVNTPNFEPLLVGSKVSYAPSGSNPDGYFQELGDLNMN

Query:  HWGNDLSLRIEPSKGRSGVWSGE
        + G    L ++  K +S V S E
Subjt:  HWGNDLSLRIEPSKGRSGVWSGE

Q9SR34 Transcriptional regulator TAC11.3e-0750Show/hide
Query:  MDSEKLGSSSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRA
        M++ K   +++  S+  S   ++   DS    RSY C FC RGF+NAQALGGHMNIHR+DRA
Subjt:  MDSEKLGSSSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRA

Arabidopsis top hitse value%identityAlignment
AT3G09290.1 telomerase activator19.2e-0950Show/hide
Query:  MDSEKLGSSSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRA
        M++ K   +++  S+  S   ++   DS    RSY C FC RGF+NAQALGGHMNIHR+DRA
Subjt:  MDSEKLGSSSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRA

AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein3.1e-0952.63Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEPSTFVNTPNF
        RSY C FCKR F +AQALGGHMN+HR+DRA    Q +    PS    PS     PN+
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEPSTFVNTPNF

AT3G23140.1 C2H2 and C2HC zinc fingers superfamily protein5.7e-1133.93Show/hide
Query:  DRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVAS-----FCVPSKQIEPST---FVNTPNFEPLLVGSKVSYAPSGS----N
        D+  +  S S   +R+Y C  CKRGFTN QALGGH NIHR++R       +S     F +P     PS+   F N P + P +     SY   GS    N
Subjt:  DRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVAS-----FCVPSKQIEPST---FVNTPNFEPLLVGSKVSYAPSGS----N

Query:  PDGYFQELGDLNMNHWG--------NDLSL--------------RIEPSKGRSGVWSGEGLDLELRLG
        P    Q  G  + +  G        +DL+L              R  P  G S    G+ LDL+LRLG
Subjt:  PDGYFQELGDLNMNHWG--------NDLSL--------------RIEPSKGRSGVWSGEGLDLELRLG

AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein2.2e-1038.83Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEPSTFVNTPNFEPLLVGSKVSYAPSGSNPDGYFQELGDLNMNHWGNDLSLRIEP
        RSY C FC R F +AQALGGHMN+HR+DRA   +Q  S   PS   + +        + L VGSKV        P+G  +E+ D+  N+       R E 
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEPSTFVNTPNFEPLLVGSKVSYAPSGSNPDGYFQELGDLNMNHWGNDLSLRIEP

Query:  SKG
          G
Subjt:  SKG

AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein6.8e-1256.06Show/hide
Query:  MDSEKLGSSSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAK
        M+ E+  SS+ S +     R     S S   +R Y C FCKRGFTNAQALGGHMNIHR+DR NKAK
Subjt:  MDSEKLGSSSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCAGAAAAATTGGGCAGCAGTTCGGAGAGTTCGAGCGAAGAACAATCCGATCGAGTAAACGAAGACGATTCGGATTCGTTCGGGGTTAAACGTTCATATGGGTG
TATATTTTGCAAGCGTGGGTTCACCAACGCTCAAGCTCTTGGAGGGCATATGAATATCCATAGAAAAGATCGAGCCAATAAAGCTAAGCAAGTCGCGTCTTTTTGTGTTC
CAAGCAAGCAAATTGAGCCATCCACGTTCGTGAATACGCCTAATTTTGAGCCACTTTTGGTTGGGTCTAAGGTGAGTTATGCACCATCGGGTTCGAACCCAGATGGGTAC
TTCCAAGAACTCGGCGACTTGAATATGAACCATTGGGGGAATGATTTGAGCCTAAGAATCGAACCAAGTAAGGGGAGGAGTGGGGTTTGGAGTGGCGAGGGTTTGGATTT
GGAGCTTCGACTTGGCCATTATCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTCAGAAAAATTGGGCAGCAGTTCGGAGAGTTCGAGCGAAGAACAATCCGATCGAGTAAACGAAGACGATTCGGATTCGTTCGGGGTTAAACGTTCATATGGGTG
TATATTTTGCAAGCGTGGGTTCACCAACGCTCAAGCTCTTGGAGGGCATATGAATATCCATAGAAAAGATCGAGCCAATAAAGCTAAGCAAGTCGCGTCTTTTTGTGTTC
CAAGCAAGCAAATTGAGCCATCCACGTTCGTGAATACGCCTAATTTTGAGCCACTTTTGGTTGGGTCTAAGGTGAGTTATGCACCATCGGGTTCGAACCCAGATGGGTAC
TTCCAAGAACTCGGCGACTTGAATATGAACCATTGGGGGAATGATTTGAGCCTAAGAATCGAACCAAGTAAGGGGAGGAGTGGGGTTTGGAGTGGCGAGGGTTTGGATTT
GGAGCTTCGACTTGGCCATTATCCCTAG
Protein sequenceShow/hide protein sequence
MDSEKLGSSSESSSEEQSDRVNEDDSDSFGVKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVASFCVPSKQIEPSTFVNTPNFEPLLVGSKVSYAPSGSNPDGY
FQELGDLNMNHWGNDLSLRIEPSKGRSGVWSGEGLDLELRLGHYP