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Carg10953 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg10953
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr08:6457341..6457691
RNA-Seq ExpressionCarg10953
SyntenyCarg10953
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
InterPro domainsIPR040381 - Uncharacterized protein At4g14450-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593848.1 putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.1e-56100Show/hide
Query:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHHHHKESEPEKPPVFKKWQHPAAP
        MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHHHHKESEPEKPPVFKKWQHPAAP
Subjt:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHHHHKESEPEKPPVFKKWQHPAAP

Query:  FHYDSGSRAPRAFVPV
        FHYDSGSRAPRAFVPV
Subjt:  FHYDSGSRAPRAFVPV

XP_022930471.1 uncharacterized protein At4g14450, chloroplastic-like [Cucurbita moschata]1.6e-5297.41Show/hide
Query:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHHHHKESEPEKPPVFKKWQHPAAP
        MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSS   HHHHHHHKESEPEKPPVFKKWQHPAAP
Subjt:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHHHHKESEPEKPPVFKKWQHPAAP

Query:  FHYDSGSRAPRAFVPV
        FHYDSGSRAPRAFVPV
Subjt:  FHYDSGSRAPRAFVPV

XP_023000559.1 uncharacterized protein At4g14450, chloroplastic-like [Cucurbita maxima]1.2e-5297.41Show/hide
Query:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHHHHKESEPEKPPVFKKWQHPAAP
        MAESQRR SG AARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSS HHHHHHHHHKESEPEKPPVFKKWQHPAAP
Subjt:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHHHHKESEPEKPPVFKKWQHPAAP

Query:  FHYDSGSRAPRAFVPV
        FHYDSGSRAPRAFVPV
Subjt:  FHYDSGSRAPRAFVPV

XP_023515028.1 uncharacterized protein At4g14450, chloroplastic-like [Cucurbita pepo subsp. pepo]5.2e-5193.97Show/hide
Query:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHHHHKESEPEKPPVFKKWQHPAAP
        MAESQRRPS TA+RKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSG+ISSS    HHHHHHHHKESEPEKPPVFKKWQHPAAP
Subjt:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHHHHKESEPEKPPVFKKWQHPAAP

Query:  FHYDSGSRAPRAFVPV
        FHYDSGSRAPRAFVPV
Subjt:  FHYDSGSRAPRAFVPV

XP_038875425.1 uncharacterized protein At4g14450, chloroplastic-like [Benincasa hispida]3.0e-3880.34Show/hide
Query:  MAESQRRPSGTAAR-KQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHHHHKESEPEKPPVFKKWQHPAA
        MA+S RR SG + R  QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQNWT DS   SSSSS      HHHHKESEPEKPPVFKKWQHPAA
Subjt:  MAESQRRPSGTAAR-KQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHHHHKESEPEKPPVFKKWQHPAA

Query:  PFHYDSGSRAPRAFVPV
        PFHYDSG RAPR FVPV
Subjt:  PFHYDSGSRAPRAFVPV

TrEMBL top hitse value%identityAlignment
A0A0A0LLJ8 Uncharacterized protein2.4e-3374.8Show/hide
Query:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSP-SSPTEIQNW-TADS---GSISSSSSHHHH--HHHHHHKESEPEKPPVFKK
        MA+S   P+  AA    PSRLQRRAPASLQI+RSDWKVAIPLLSPLVSP SSP +I +W T DS    S +SSSSHHHH  HHHHHHKES+PEK PVFKK
Subjt:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSP-SSPTEIQNW-TADS---GSISSSSSHHHH--HHHHHHKESEPEKPPVFKK

Query:  WQHPAAPFHYDSGSRAPRAFVPV
        WQHPAAPFHYDSG+RAPR FVPV
Subjt:  WQHPAAPFHYDSGSRAPRAFVPV

A0A1S3CDB1 uncharacterized protein At4g14450, chloroplastic-like9.3e-3875.78Show/hide
Query:  MAESQRRPSGTAAR-KQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADS------GSISSSSSHHHHHH-----HHHHKESEPEKP
        MA+S RR S T  R  QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQNWT DS       S SSSSSHHHHHH     H HHKE E EK 
Subjt:  MAESQRRPSGTAAR-KQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADS------GSISSSSSHHHHHH-----HHHHKESEPEKP

Query:  PVFKKWQHPAAPFHYDSGSRAPRAFVPV
        PVFKKWQHPAAPFHYDSG RAPR FVPV
Subjt:  PVFKKWQHPAAPFHYDSGSRAPRAFVPV

A0A6J1CA35 uncharacterized protein At4g14450, chloroplastic-like3.0e-2870.59Show/hide
Query:  MAESQRRPSGTAARK-QQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHHHHKESEPEKP--PVFKKWQHP
        MA++QRR SG  +R+ QQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQN    S   S+SS           + S+PEKP  PV KKWQHP
Subjt:  MAESQRRPSGTAARK-QQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHHHHKESEPEKP--PVFKKWQHP

Query:  AAPFHYDSGSRAPRAFVPV
        AAPFHYDSG RAPR FVPV
Subjt:  AAPFHYDSGSRAPRAFVPV

A0A6J1ER11 uncharacterized protein At4g14450, chloroplastic-like7.8e-5397.41Show/hide
Query:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHHHHKESEPEKPPVFKKWQHPAAP
        MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSS   HHHHHHHKESEPEKPPVFKKWQHPAAP
Subjt:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHHHHKESEPEKPPVFKKWQHPAAP

Query:  FHYDSGSRAPRAFVPV
        FHYDSGSRAPRAFVPV
Subjt:  FHYDSGSRAPRAFVPV

A0A6J1KKB8 uncharacterized protein At4g14450, chloroplastic-like6.0e-5397.41Show/hide
Query:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHHHHKESEPEKPPVFKKWQHPAAP
        MAESQRR SG AARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSS HHHHHHHHHKESEPEKPPVFKKWQHPAAP
Subjt:  MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHHHHKESEPEKPPVFKKWQHPAAP

Query:  FHYDSGSRAPRAFVPV
        FHYDSGSRAPRAFVPV
Subjt:  FHYDSGSRAPRAFVPV

SwissProt top hitse value%identityAlignment
Q6NN02 Uncharacterized protein At4g14450, chloroplastic3.1e-0641.03Show/hide
Query:  QRRPSGTAARKQQPSRLQRRAPASL--QISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHH----HHHHHHHKESEPEKPPVFKKWQHPA
        QR  S  A+ ++Q S+LQRRAP+ +    S S+W VAIPLLSPL               + S++SS    H     +      E E +K PVFKKWQHPA
Subjt:  QRRPSGTAARKQQPSRLQRRAPASL--QISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHH----HHHHHHHKESEPEKPPVFKKWQHPA

Query:  APFHYDSGSRAPRAFVP
        +PF Y+     P  FVP
Subjt:  APFHYDSGSRAPRAFVP

Arabidopsis top hitse value%identityAlignment
AT1G04330.1 unknown protein1.6e-1041.38Show/hide
Query:  MAESQRRPSGTAARKQQPSRLQRRAPASLQIS--RSDWKVAIPLLSPLVS-PSSPTEIQNWTADSGSISSSSSHHHHHHHHHHKESEPEKPPVFKKWQHP
        M+ + R  SG+  RK   SRLQRRAP  L+I+   ++WKVAIPLLSP  S P  P  +                            E EKPPVFKKWQHP
Subjt:  MAESQRRPSGTAARKQQPSRLQRRAPASLQIS--RSDWKVAIPLLSPLVS-PSSPTEIQNWTADSGSISSSSSHHHHHHHHHHKESEPEKPPVFKKWQHP

Query:  AAPFHYDSGSRAPRAF
        AAPF+Y     + + F
Subjt:  AAPFHYDSGSRAPRAF

AT3G23170.1 unknown protein4.0e-0941.12Show/hide
Query:  KQQPSRLQRRAPASLQI----SRSDWKVAIPLLSPL-VSPSSPTEIQNWTADSGSISSSSSHHHHHHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRA
        ++QPSRL +R PA   +    + ++W  AIPLLSPL +SP S         D   +  + S               EK PVFKKWQHPAAPF+Y+S +  
Subjt:  KQQPSRLQRRAPASLQI----SRSDWKVAIPLLSPL-VSPSSPTEIQNWTADSGSISSSSSHHHHHHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRA

Query:  PRAFVPV
        P  FVPV
Subjt:  PRAFVPV

AT4G14450.1 unknown protein2.2e-0741.03Show/hide
Query:  QRRPSGTAARKQQPSRLQRRAPASL--QISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHH----HHHHHHHKESEPEKPPVFKKWQHPA
        QR  S  A+ ++Q S+LQRRAP+ +    S S+W VAIPLLSPL               + S++SS    H     +      E E +K PVFKKWQHPA
Subjt:  QRRPSGTAARKQQPSRLQRRAPASL--QISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHH----HHHHHHHKESEPEKPPVFKKWQHPA

Query:  APFHYDSGSRAPRAFVP
        +PF Y+     P  FVP
Subjt:  APFHYDSGSRAPRAFVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAATCGCAGAGACGACCCTCCGGCACCGCCGCCCGGAAGCAGCAGCCAAGCCGCCTGCAGCGCCGGGCTCCAGCCTCCCTCCAAATCAGCCGCTCCGATTGGAA
GGTCGCCATCCCTCTCCTATCGCCACTCGTATCGCCATCGTCGCCGACAGAGATCCAAAATTGGACCGCCGATTCAGGATCGATTTCTTCTTCTTCTTCTCATCATCATC
ATCATCATCATCATCATCATAAAGAATCGGAGCCGGAGAAGCCGCCAGTTTTTAAGAAATGGCAGCATCCGGCGGCGCCGTTTCATTACGATTCGGGTTCTAGGGCTCCC
AGAGCATTCGTACCCGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAATCGCAGAGACGACCCTCCGGCACCGCCGCCCGGAAGCAGCAGCCAAGCCGCCTGCAGCGCCGGGCTCCAGCCTCCCTCCAAATCAGCCGCTCCGATTGGAA
GGTCGCCATCCCTCTCCTATCGCCACTCGTATCGCCATCGTCGCCGACAGAGATCCAAAATTGGACCGCCGATTCAGGATCGATTTCTTCTTCTTCTTCTCATCATCATC
ATCATCATCATCATCATCATAAAGAATCGGAGCCGGAGAAGCCGCCAGTTTTTAAGAAATGGCAGCATCCGGCGGCGCCGTTTCATTACGATTCGGGTTCTAGGGCTCCC
AGAGCATTCGTACCCGTTTAG
Protein sequenceShow/hide protein sequence
MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAP
RAFVPV